data_3O15
#
_model_server_result.job_id            QZEMmJ7diSZ_o3WJW8yYCA 
_model_server_result.datetime_utc      '2024-10-20 20:47:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3o15 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":238}' 
#
_entry.id    3O15 
#
_exptl.entry_id    3O15 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              175.959 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PYROPHOSPHATE 2-' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3O15 
_cell.length_a            96.02 
_cell.length_b            96.02 
_cell.length_c            59.34 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3O15 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        94 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 42 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'H2 O7 P2 -2' 
_chem_comp.formula_weight    175.959 
_chem_comp.id                POP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PYROPHOSPHATE 2-' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1 POP doub 302 n n 
P1 O2 POP sing 303 n n 
P1 O3 POP sing 304 n n 
P1 O POP sing 305 n n 
O2 HO2 POP sing 306 n n 
O P2 POP sing 307 n n 
P2 O4 POP doub 308 n n 
P2 O5 POP sing 309 n n 
P2 O6 POP sing 310 n n 
O5 HO5 POP sing 311 n n 
#
_atom_sites.entry_id                     3O15 
_atom_sites.fract_transf_matrix[1][1]    0.010414 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010414 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016852 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 3NM A 1 236 236 3NM 3NM . 
C 3 IFP A 1 237 237 IFP IFP . 
D 4 POP A 1 238 238 POP POP . 
E 5 HOH A 1 239 1 HOH HOH . 
E 5 HOH A 2 240 2 HOH HOH . 
E 5 HOH A 3 241 3 HOH HOH . 
E 5 HOH A 4 242 4 HOH HOH . 
E 5 HOH A 5 243 5 HOH HOH . 
E 5 HOH A 6 244 6 HOH HOH . 
E 5 HOH A 7 245 7 HOH HOH . 
E 5 HOH A 8 246 8 HOH HOH . 
E 5 HOH A 9 247 9 HOH HOH . 
E 5 HOH A 10 248 10 HOH HOH . 
E 5 HOH A 11 249 11 HOH HOH . 
E 5 HOH A 12 250 12 HOH HOH . 
E 5 HOH A 13 251 13 HOH HOH . 
E 5 HOH A 14 252 14 HOH HOH . 
E 5 HOH A 15 253 15 HOH HOH . 
E 5 HOH A 16 254 16 HOH HOH . 
E 5 HOH A 17 255 17 HOH HOH . 
E 5 HOH A 18 256 18 HOH HOH . 
E 5 HOH A 19 257 19 HOH HOH . 
E 5 HOH A 20 258 20 HOH HOH . 
E 5 HOH A 21 259 21 HOH HOH . 
E 5 HOH A 22 260 22 HOH HOH . 
E 5 HOH A 23 261 23 HOH HOH . 
E 5 HOH A 24 262 24 HOH HOH . 
E 5 HOH A 25 263 25 HOH HOH . 
E 5 HOH A 26 264 26 HOH HOH . 
E 5 HOH A 27 265 27 HOH HOH . 
E 5 HOH A 28 266 28 HOH HOH . 
E 5 HOH A 29 267 29 HOH HOH . 
E 5 HOH A 30 268 30 HOH HOH . 
E 5 HOH A 31 269 31 HOH HOH . 
E 5 HOH A 32 270 32 HOH HOH . 
E 5 HOH A 33 271 33 HOH HOH . 
E 5 HOH A 34 272 34 HOH HOH . 
E 5 HOH A 35 273 35 HOH HOH . 
E 5 HOH A 36 274 36 HOH HOH . 
E 5 HOH A 37 275 37 HOH HOH . 
E 5 HOH A 38 276 38 HOH HOH . 
E 5 HOH A 39 277 39 HOH HOH . 
E 5 HOH A 40 278 40 HOH HOH . 
E 5 HOH A 41 279 41 HOH HOH . 
E 5 HOH A 42 280 42 HOH HOH . 
E 5 HOH A 43 281 43 HOH HOH . 
E 5 HOH A 44 282 44 HOH HOH . 
E 5 HOH A 45 283 45 HOH HOH . 
E 5 HOH A 46 284 46 HOH HOH . 
E 5 HOH A 47 285 47 HOH HOH . 
E 5 HOH A 48 286 48 HOH HOH . 
E 5 HOH A 49 287 49 HOH HOH . 
E 5 HOH A 50 288 50 HOH HOH . 
E 5 HOH A 51 289 51 HOH HOH . 
E 5 HOH A 52 290 52 HOH HOH . 
E 5 HOH A 53 291 53 HOH HOH . 
E 5 HOH A 54 292 54 HOH HOH . 
E 5 HOH A 55 293 55 HOH HOH . 
E 5 HOH A 56 294 56 HOH HOH . 
E 5 HOH A 57 295 57 HOH HOH . 
E 5 HOH A 58 296 58 HOH HOH . 
E 5 HOH A 59 297 59 HOH HOH . 
E 5 HOH A 60 298 60 HOH HOH . 
E 5 HOH A 61 299 61 HOH HOH . 
E 5 HOH A 62 300 62 HOH HOH . 
E 5 HOH A 63 301 63 HOH HOH . 
E 5 HOH A 64 302 64 HOH HOH . 
E 5 HOH A 65 303 65 HOH HOH . 
E 5 HOH A 66 304 66 HOH HOH . 
E 5 HOH A 67 305 67 HOH HOH . 
E 5 HOH A 68 306 68 HOH HOH . 
E 5 HOH A 69 307 69 HOH HOH . 
E 5 HOH A 70 308 70 HOH HOH . 
E 5 HOH A 71 309 71 HOH HOH . 
E 5 HOH A 72 310 72 HOH HOH . 
E 5 HOH A 73 311 73 HOH HOH . 
E 5 HOH A 74 312 74 HOH HOH . 
E 5 HOH A 75 313 75 HOH HOH . 
E 5 HOH A 76 314 76 HOH HOH . 
E 5 HOH A 77 315 77 HOH HOH . 
E 5 HOH A 78 316 78 HOH HOH . 
E 5 HOH A 79 317 79 HOH HOH . 
E 5 HOH A 80 318 80 HOH HOH . 
E 5 HOH A 81 319 81 HOH HOH . 
E 5 HOH A 82 320 82 HOH HOH . 
E 5 HOH A 83 321 83 HOH HOH . 
E 5 HOH A 84 322 84 HOH HOH . 
E 5 HOH A 85 323 85 HOH HOH . 
E 5 HOH A 86 324 86 HOH HOH . 
E 5 HOH A 87 325 87 HOH HOH . 
E 5 HOH A 88 326 88 HOH HOH . 
E 5 HOH A 89 327 89 HOH HOH . 
E 5 HOH A 90 328 90 HOH HOH . 
E 5 HOH A 91 329 91 HOH HOH . 
E 5 HOH A 92 330 92 HOH HOH . 
E 5 HOH A 93 331 93 HOH HOH . 
E 5 HOH A 94 332 94 HOH HOH . 
E 5 HOH A 95 333 95 HOH HOH . 
E 5 HOH A 96 334 96 HOH HOH . 
E 5 HOH A 97 335 97 HOH HOH . 
E 5 HOH A 98 336 98 HOH HOH . 
E 5 HOH A 99 337 99 HOH HOH . 
E 5 HOH A 100 338 100 HOH HOH . 
E 5 HOH A 101 339 101 HOH HOH . 
E 5 HOH A 102 340 102 HOH HOH . 
E 5 HOH A 103 341 103 HOH HOH . 
E 5 HOH A 104 342 104 HOH HOH . 
E 5 HOH A 105 343 105 HOH HOH . 
E 5 HOH A 106 344 106 HOH HOH . 
E 5 HOH A 107 345 107 HOH HOH . 
E 5 HOH A 108 346 108 HOH HOH . 
E 5 HOH A 109 347 109 HOH HOH . 
E 5 HOH A 110 348 110 HOH HOH . 
E 5 HOH A 111 349 111 HOH HOH . 
E 5 HOH A 112 350 112 HOH HOH . 
E 5 HOH A 113 351 113 HOH HOH . 
E 5 HOH A 114 352 114 HOH HOH . 
E 5 HOH A 115 353 115 HOH HOH . 
E 5 HOH A 116 354 116 HOH HOH . 
E 5 HOH A 117 355 117 HOH HOH . 
E 5 HOH A 118 356 118 HOH HOH . 
E 5 HOH A 119 357 119 HOH HOH . 
E 5 HOH A 120 358 120 HOH HOH . 
E 5 HOH A 121 359 121 HOH HOH . 
E 5 HOH A 122 360 122 HOH HOH . 
E 5 HOH A 123 361 123 HOH HOH . 
E 5 HOH A 124 362 124 HOH HOH . 
E 5 HOH A 125 363 125 HOH HOH . 
E 5 HOH A 126 364 126 HOH HOH . 
E 5 HOH A 127 365 127 HOH HOH . 
E 5 HOH A 128 366 128 HOH HOH . 
E 5 HOH A 129 367 129 HOH HOH . 
E 5 HOH A 130 368 130 HOH HOH . 
E 5 HOH A 131 369 131 HOH HOH . 
E 5 HOH A 132 370 132 HOH HOH . 
E 5 HOH A 133 371 133 HOH HOH . 
E 5 HOH A 134 372 134 HOH HOH . 
E 5 HOH A 135 373 135 HOH HOH . 
E 5 HOH A 136 374 136 HOH HOH . 
E 5 HOH A 137 375 137 HOH HOH . 
E 5 HOH A 138 376 138 HOH HOH . 
E 5 HOH A 139 377 139 HOH HOH . 
E 5 HOH A 140 378 140 HOH HOH . 
E 5 HOH A 141 379 141 HOH HOH . 
E 5 HOH A 142 380 142 HOH HOH . 
E 5 HOH A 143 381 143 HOH HOH . 
E 5 HOH A 144 382 144 HOH HOH . 
E 5 HOH A 145 383 145 HOH HOH . 
E 5 HOH A 146 384 146 HOH HOH . 
E 5 HOH A 147 385 147 HOH HOH . 
E 5 HOH A 148 386 148 HOH HOH . 
E 5 HOH A 149 387 149 HOH HOH . 
E 5 HOH A 150 388 150 HOH HOH . 
E 5 HOH A 151 389 151 HOH HOH . 
E 5 HOH A 152 390 152 HOH HOH . 
E 5 HOH A 153 391 153 HOH HOH . 
E 5 HOH A 154 392 154 HOH HOH . 
E 5 HOH A 155 393 155 HOH HOH . 
E 5 HOH A 156 394 156 HOH HOH . 
E 5 HOH A 157 395 157 HOH HOH . 
E 5 HOH A 158 396 158 HOH HOH . 
E 5 HOH A 159 397 159 HOH HOH . 
E 5 HOH A 160 398 160 HOH HOH . 
E 5 HOH A 161 399 161 HOH HOH . 
E 5 HOH A 162 400 162 HOH HOH . 
E 5 HOH A 163 401 163 HOH HOH . 
E 5 HOH A 164 402 164 HOH HOH . 
E 5 HOH A 165 403 165 HOH HOH . 
E 5 HOH A 166 404 166 HOH HOH . 
E 5 HOH A 167 405 167 HOH HOH . 
E 5 HOH A 168 406 168 HOH HOH . 
E 5 HOH A 169 407 169 HOH HOH . 
E 5 HOH A 170 408 170 HOH HOH . 
E 5 HOH A 171 409 171 HOH HOH . 
E 5 HOH A 172 410 172 HOH HOH . 
E 5 HOH A 173 411 173 HOH HOH . 
E 5 HOH A 174 412 174 HOH HOH . 
E 5 HOH A 175 413 175 HOH HOH . 
E 5 HOH A 176 414 176 HOH HOH . 
E 5 HOH A 177 415 177 HOH HOH . 
E 5 HOH A 178 416 178 HOH HOH . 
E 5 HOH A 179 417 179 HOH HOH . 
E 5 HOH A 180 418 180 HOH HOH . 
E 5 HOH A 181 419 181 HOH HOH . 
E 5 HOH A 182 420 182 HOH HOH . 
E 5 HOH A 183 421 183 HOH HOH . 
E 5 HOH A 184 422 184 HOH HOH . 
E 5 HOH A 185 423 185 HOH HOH . 
E 5 HOH A 186 424 186 HOH HOH . 
E 5 HOH A 187 425 187 HOH HOH . 
E 5 HOH A 188 426 188 HOH HOH . 
E 5 HOH A 189 427 189 HOH HOH . 
E 5 HOH A 190 428 190 HOH HOH . 
E 5 HOH A 191 429 191 HOH HOH . 
E 5 HOH A 192 430 192 HOH HOH . 
E 5 HOH A 193 431 193 HOH HOH . 
E 5 HOH A 194 432 194 HOH HOH . 
E 5 HOH A 195 433 195 HOH HOH . 
E 5 HOH A 196 434 196 HOH HOH . 
E 5 HOH A 197 435 197 HOH HOH . 
E 5 HOH A 198 436 198 HOH HOH . 
E 5 HOH A 199 437 199 HOH HOH . 
E 5 HOH A 200 438 200 HOH HOH . 
E 5 HOH A 201 439 201 HOH HOH . 
E 5 HOH A 202 440 202 HOH HOH . 
E 5 HOH A 203 441 203 HOH HOH . 
E 5 HOH A 204 442 204 HOH HOH . 
E 5 HOH A 205 443 205 HOH HOH . 
E 5 HOH A 206 444 206 HOH HOH . 
E 5 HOH A 207 445 207 HOH HOH . 
E 5 HOH A 208 446 208 HOH HOH . 
E 5 HOH A 209 447 209 HOH HOH . 
E 5 HOH A 210 448 210 HOH HOH . 
E 5 HOH A 211 449 211 HOH HOH . 
E 5 HOH A 212 450 212 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 POP . . . D 4 9.183 44.267 0.624 1 55.31 ? P1 POP 238 A 1 
HETATM 2 O O1 POP . . . D 4 10.279 44.288 1.705 1 55.41 ? O1 POP 238 A 1 
HETATM 3 O O2 POP . . . D 4 9.796 44.819 -0.765 1 55.9 ? O2 POP 238 A 1 
HETATM 4 O O3 POP . . . D 4 8.021 45.177 1.072 1 56.27 ? O3 POP 238 A 1 
HETATM 5 O O POP . . . D 4 8.606 42.755 0.45 1 57.37 ? O POP 238 A 1 
HETATM 6 P P2 POP . . . D 4 9.516 41.903 -0.594 1 59.5 ? P2 POP 238 A 1 
HETATM 7 O O4 POP . . . D 4 11.018 42.033 -0.243 1 58.4 ? O4 POP 238 A 1 
HETATM 8 O O5 POP . . . D 4 9.091 40.351 -0.5 1 57.29 ? O5 POP 238 A 1 
HETATM 9 O O6 POP . . . D 4 9.268 42.414 -2.037 1 59.1 ? O6 POP 238 A 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#