data_3O1K # _model_server_result.job_id r-eC25BWEvX8bUztdGJLLw _model_server_result.datetime_utc '2024-11-22 18:52:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o1k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":200}' # _entry.id 3O1K # _exptl.entry_id 3O1K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O1K _cell.length_a 95.098 _cell.length_b 101.734 _cell.length_c 116.397 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O1K _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA octameric 8 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1,2 A,B,C,D,E,F,G,H,I 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1 0 0 0 -1 0 0 0 -1 0 101.734 116.397 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 3O1K _atom_sites.fract_transf_matrix[1][1] 0.010515 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00983 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008591 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 EDO A 1 200 200 EDO EDO . F 3 HOH A 1 130 7 HOH HOH . F 3 HOH A 2 131 9 HOH HOH . F 3 HOH A 3 132 132 HOH HOH . F 3 HOH A 4 133 12 HOH HOH . F 3 HOH A 5 134 18 HOH HOH . F 3 HOH A 6 135 26 HOH HOH . F 3 HOH A 7 136 136 HOH HOH . F 3 HOH A 8 137 137 HOH HOH . F 3 HOH A 9 138 27 HOH HOH . F 3 HOH A 10 139 28 HOH HOH . F 3 HOH A 11 140 31 HOH HOH . F 3 HOH A 12 141 45 HOH HOH . F 3 HOH A 13 142 50 HOH HOH . F 3 HOH A 14 143 53 HOH HOH . F 3 HOH A 15 144 69 HOH HOH . F 3 HOH A 16 145 70 HOH HOH . F 3 HOH A 17 146 146 HOH HOH . F 3 HOH A 18 147 77 HOH HOH . F 3 HOH A 19 149 79 HOH HOH . F 3 HOH A 20 150 81 HOH HOH . F 3 HOH A 21 151 89 HOH HOH . F 3 HOH A 22 152 95 HOH HOH . F 3 HOH A 23 153 98 HOH HOH . F 3 HOH A 24 154 99 HOH HOH . F 3 HOH A 25 155 118 HOH HOH . F 3 HOH A 26 156 156 HOH HOH . F 3 HOH A 27 157 119 HOH HOH . F 3 HOH A 28 158 123 HOH HOH . F 3 HOH A 29 159 126 HOH HOH . G 3 HOH B 1 130 2 HOH HOH . G 3 HOH B 2 131 4 HOH HOH . G 3 HOH B 3 132 6 HOH HOH . G 3 HOH B 4 133 19 HOH HOH . G 3 HOH B 5 134 20 HOH HOH . G 3 HOH B 6 135 22 HOH HOH . G 3 HOH B 7 136 23 HOH HOH . G 3 HOH B 8 137 24 HOH HOH . G 3 HOH B 9 138 29 HOH HOH . G 3 HOH B 10 139 34 HOH HOH . G 3 HOH B 11 140 35 HOH HOH . G 3 HOH B 12 141 38 HOH HOH . G 3 HOH B 13 142 40 HOH HOH . G 3 HOH B 14 143 143 HOH HOH . G 3 HOH B 15 144 42 HOH HOH . G 3 HOH B 16 145 47 HOH HOH . G 3 HOH B 17 146 49 HOH HOH . G 3 HOH B 18 147 51 HOH HOH . G 3 HOH B 19 148 59 HOH HOH . G 3 HOH B 20 149 149 HOH HOH . G 3 HOH B 21 150 64 HOH HOH . G 3 HOH B 22 151 68 HOH HOH . G 3 HOH B 23 152 75 HOH HOH . G 3 HOH B 24 153 76 HOH HOH . G 3 HOH B 25 154 154 HOH HOH . G 3 HOH B 26 155 84 HOH HOH . G 3 HOH B 27 156 86 HOH HOH . G 3 HOH B 28 157 90 HOH HOH . G 3 HOH B 29 158 92 HOH HOH . G 3 HOH B 30 159 93 HOH HOH . G 3 HOH B 31 160 94 HOH HOH . G 3 HOH B 32 161 97 HOH HOH . G 3 HOH B 33 162 103 HOH HOH . G 3 HOH B 34 163 111 HOH HOH . G 3 HOH B 35 164 120 HOH HOH . G 3 HOH B 36 165 128 HOH HOH . H 3 HOH C 1 130 5 HOH HOH . H 3 HOH C 2 131 15 HOH HOH . H 3 HOH C 3 132 17 HOH HOH . H 3 HOH C 4 133 133 HOH HOH . H 3 HOH C 5 134 21 HOH HOH . H 3 HOH C 6 135 25 HOH HOH . H 3 HOH C 7 136 44 HOH HOH . H 3 HOH C 8 137 55 HOH HOH . H 3 HOH C 9 138 58 HOH HOH . H 3 HOH C 10 139 60 HOH HOH . H 3 HOH C 11 140 65 HOH HOH . H 3 HOH C 12 141 67 HOH HOH . H 3 HOH C 13 142 74 HOH HOH . H 3 HOH C 14 143 96 HOH HOH . H 3 HOH C 15 144 108 HOH HOH . H 3 HOH C 16 145 113 HOH HOH . H 3 HOH C 17 146 117 HOH HOH . H 3 HOH C 18 147 147 HOH HOH . H 3 HOH C 19 148 78 HOH HOH . H 3 HOH C 20 149 121 HOH HOH . H 3 HOH C 21 151 151 HOH HOH . H 3 HOH C 22 152 152 HOH HOH . I 3 HOH D 1 130 1 HOH HOH . I 3 HOH D 2 131 131 HOH HOH . I 3 HOH D 3 132 3 HOH HOH . I 3 HOH D 4 133 8 HOH HOH . I 3 HOH D 5 134 13 HOH HOH . I 3 HOH D 6 135 135 HOH HOH . I 3 HOH D 7 136 16 HOH HOH . I 3 HOH D 8 137 30 HOH HOH . I 3 HOH D 9 138 138 HOH HOH . I 3 HOH D 10 139 139 HOH HOH . I 3 HOH D 11 140 140 HOH HOH . I 3 HOH D 12 141 33 HOH HOH . I 3 HOH D 13 142 142 HOH HOH . I 3 HOH D 14 143 36 HOH HOH . I 3 HOH D 15 144 37 HOH HOH . I 3 HOH D 16 145 39 HOH HOH . I 3 HOH D 17 146 41 HOH HOH . I 3 HOH D 18 147 43 HOH HOH . I 3 HOH D 19 148 148 HOH HOH . I 3 HOH D 20 149 46 HOH HOH . I 3 HOH D 21 150 48 HOH HOH . I 3 HOH D 22 151 52 HOH HOH . I 3 HOH D 23 152 54 HOH HOH . I 3 HOH D 24 153 153 HOH HOH . I 3 HOH D 25 154 56 HOH HOH . I 3 HOH D 26 155 155 HOH HOH . I 3 HOH D 27 156 57 HOH HOH . I 3 HOH D 28 157 157 HOH HOH . I 3 HOH D 29 158 61 HOH HOH . I 3 HOH D 30 159 62 HOH HOH . I 3 HOH D 31 160 63 HOH HOH . I 3 HOH D 32 161 71 HOH HOH . I 3 HOH D 33 162 72 HOH HOH . I 3 HOH D 34 163 73 HOH HOH . I 3 HOH D 35 164 80 HOH HOH . I 3 HOH D 36 165 87 HOH HOH . I 3 HOH D 37 166 88 HOH HOH . I 3 HOH D 38 167 100 HOH HOH . I 3 HOH D 39 168 101 HOH HOH . I 3 HOH D 40 169 102 HOH HOH . I 3 HOH D 41 170 106 HOH HOH . I 3 HOH D 42 171 107 HOH HOH . I 3 HOH D 43 172 109 HOH HOH . I 3 HOH D 44 173 110 HOH HOH . I 3 HOH D 45 174 112 HOH HOH . I 3 HOH D 46 175 114 HOH HOH . I 3 HOH D 47 176 127 HOH HOH . I 3 HOH D 48 177 129 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 25.698 46.015 43.233 1 67.91 ? C1 EDO 200 A 1 HETATM 2 O O1 EDO . . . E 2 24.86 45.715 44.358 1 67.29 ? O1 EDO 200 A 1 HETATM 3 C C2 EDO . . . E 2 25.712 44.822 42.28 1 65.69 ? C2 EDO 200 A 1 HETATM 4 O O2 EDO . . . E 2 24.749 45.061 41.237 1 64.57 ? O2 EDO 200 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 4 #