data_3O23 # _model_server_result.job_id hylLUw08-laRaUKmX3TT7Q _model_server_result.datetime_utc '2024-12-21 18:28:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o23 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3O23 # _exptl.entry_id 3O23 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 463.43 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5S)-5-methyl-1-(quinolin-4-ylmethyl)-3-{4-[(trifluoromethyl)sulfonyl]phenyl}imidazolidine-2,4-dione _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 98.74 _cell.angle_gamma 90 _cell.entry_id 3O23 _cell.length_a 49.768 _cell.length_b 48.755 _cell.length_c 70.73 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O23 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H16 F3 N3 O4 S' _chem_comp.formula_weight 463.43 _chem_comp.id MQY _chem_comp.mon_nstd_flag . _chem_comp.name (5S)-5-methyl-1-(quinolin-4-ylmethyl)-3-{4-[(trifluoromethyl)sulfonyl]phenyl}imidazolidine-2,4-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 MQY sing 237 n n N1 C3 MQY sing 238 n n N1 C4 MQY sing 239 n n C2 C5 MQY doub 240 n y C2 C6 MQY sing 241 n y C3 N7 MQY sing 242 n n C3 O8 MQY doub 243 n n C4 C9 MQY sing 244 n n C4 O10 MQY doub 245 n n C5 C11 MQY sing 246 n y C6 C12 MQY doub 247 n y N7 C9 MQY sing 248 n n N7 C13 MQY sing 249 n n C9 C14 MQY sing 250 n n C11 C15 MQY doub 251 n y C12 C15 MQY sing 252 n y C13 C16 MQY sing 253 n n C15 S17 MQY sing 254 n n C16 C18 MQY doub 255 n y C16 C19 MQY sing 256 n y S17 C20 MQY sing 257 n n S17 O21 MQY doub 258 n n S17 O22 MQY doub 259 n n C18 C23 MQY sing 260 n y C18 C24 MQY sing 261 n y C19 C25 MQY doub 262 n y C20 F26 MQY sing 263 n n C20 F27 MQY sing 264 n n C20 F28 MQY sing 265 n n C23 N29 MQY doub 266 n y C23 C30 MQY sing 267 n y C24 C31 MQY doub 268 n y C25 N29 MQY sing 269 n y C30 C32 MQY doub 270 n y C31 C32 MQY sing 271 n y C5 H5 MQY sing 272 n n C6 H6 MQY sing 273 n n C9 H9 MQY sing 274 n n C11 H11 MQY sing 275 n n C12 H12 MQY sing 276 n n C13 H13 MQY sing 277 n n C13 H13A MQY sing 278 n n C14 H14 MQY sing 279 n n C14 H14A MQY sing 280 n n C14 H14B MQY sing 281 n n C19 H19 MQY sing 282 n n C24 H24 MQY sing 283 n n C25 H25 MQY sing 284 n n C30 H30 MQY sing 285 n n C31 H31 MQY sing 286 n n C32 H32 MQY sing 287 n n # _atom_sites.entry_id 3O23 _atom_sites.fract_transf_matrix[1][1] 0.020093 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003089 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014304 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MQY A 1 1 1 MQY LIG . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 7 7 HOH HOH . C 3 HOH A 7 8 8 HOH HOH . C 3 HOH A 8 9 9 HOH HOH . C 3 HOH A 9 10 10 HOH HOH . C 3 HOH A 10 11 11 HOH HOH . C 3 HOH A 11 12 12 HOH HOH . C 3 HOH A 12 13 13 HOH HOH . C 3 HOH A 13 14 14 HOH HOH . C 3 HOH A 14 15 15 HOH HOH . C 3 HOH A 15 16 16 HOH HOH . C 3 HOH A 16 17 17 HOH HOH . C 3 HOH A 17 18 18 HOH HOH . C 3 HOH A 18 19 19 HOH HOH . C 3 HOH A 19 20 20 HOH HOH . C 3 HOH A 20 21 21 HOH HOH . C 3 HOH A 21 22 22 HOH HOH . C 3 HOH A 22 23 23 HOH HOH . C 3 HOH A 23 24 24 HOH HOH . C 3 HOH A 24 25 25 HOH HOH . C 3 HOH A 25 26 26 HOH HOH . C 3 HOH A 26 27 27 HOH HOH . C 3 HOH A 27 28 28 HOH HOH . C 3 HOH A 28 29 29 HOH HOH . C 3 HOH A 29 30 30 HOH HOH . C 3 HOH A 30 31 31 HOH HOH . C 3 HOH A 31 32 32 HOH HOH . C 3 HOH A 32 33 33 HOH HOH . C 3 HOH A 33 34 34 HOH HOH . C 3 HOH A 34 35 35 HOH HOH . C 3 HOH A 35 36 36 HOH HOH . C 3 HOH A 36 37 37 HOH HOH . C 3 HOH A 37 38 38 HOH HOH . C 3 HOH A 38 39 39 HOH HOH . C 3 HOH A 39 40 40 HOH HOH . C 3 HOH A 40 41 41 HOH HOH . C 3 HOH A 41 42 42 HOH HOH . C 3 HOH A 42 43 43 HOH HOH . C 3 HOH A 43 44 44 HOH HOH . C 3 HOH A 44 45 45 HOH HOH . C 3 HOH A 45 46 46 HOH HOH . C 3 HOH A 46 47 47 HOH HOH . C 3 HOH A 47 48 48 HOH HOH . C 3 HOH A 48 49 49 HOH HOH . C 3 HOH A 49 50 50 HOH HOH . C 3 HOH A 50 51 51 HOH HOH . C 3 HOH A 51 52 52 HOH HOH . C 3 HOH A 52 53 53 HOH HOH . C 3 HOH A 53 54 54 HOH HOH . C 3 HOH A 54 55 55 HOH HOH . C 3 HOH A 55 56 56 HOH HOH . C 3 HOH A 56 57 57 HOH HOH . C 3 HOH A 57 58 58 HOH HOH . C 3 HOH A 58 59 59 HOH HOH . C 3 HOH A 59 60 60 HOH HOH . C 3 HOH A 60 61 61 HOH HOH . C 3 HOH A 61 62 62 HOH HOH . C 3 HOH A 62 63 63 HOH HOH . C 3 HOH A 63 64 64 HOH HOH . C 3 HOH A 64 65 65 HOH HOH . C 3 HOH A 65 66 66 HOH HOH . C 3 HOH A 66 67 67 HOH HOH . C 3 HOH A 67 68 68 HOH HOH . C 3 HOH A 68 69 69 HOH HOH . C 3 HOH A 69 70 70 HOH HOH . C 3 HOH A 70 71 71 HOH HOH . C 3 HOH A 71 72 72 HOH HOH . C 3 HOH A 72 73 73 HOH HOH . C 3 HOH A 73 74 74 HOH HOH . C 3 HOH A 74 75 75 HOH HOH . C 3 HOH A 75 76 76 HOH HOH . C 3 HOH A 76 77 77 HOH HOH . C 3 HOH A 77 78 78 HOH HOH . C 3 HOH A 78 79 79 HOH HOH . C 3 HOH A 79 80 80 HOH HOH . C 3 HOH A 80 81 81 HOH HOH . C 3 HOH A 81 82 82 HOH HOH . C 3 HOH A 82 83 83 HOH HOH . C 3 HOH A 83 84 84 HOH HOH . C 3 HOH A 84 85 85 HOH HOH . C 3 HOH A 85 1287 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 MQY . . . B 2 6.893 -0.077 22.632 1 45.55 ? N1 MQY 1 A 1 HETATM 2 C C2 MQY . . . B 2 7.607 -1.223 22.333 1 44.56 ? C2 MQY 1 A 1 HETATM 3 C C3 MQY . . . B 2 7.082 1.136 22.051 1 45.67 ? C3 MQY 1 A 1 HETATM 4 C C4 MQY . . . B 2 5.899 -0.028 23.563 1 46.76 ? C4 MQY 1 A 1 HETATM 5 C C5 MQY . . . B 2 6.937 -2.33 21.736 1 43.85 ? C5 MQY 1 A 1 HETATM 6 C C6 MQY . . . B 2 9.006 -1.325 22.606 1 43.97 ? C6 MQY 1 A 1 HETATM 7 N N7 MQY . . . B 2 6.205 2.027 22.586 1 45.98 ? N7 MQY 1 A 1 HETATM 8 O O8 MQY . . . B 2 7.905 1.398 21.176 1 44.75 ? O8 MQY 1 A 1 HETATM 9 C C9 MQY . . . B 2 5.351 1.41 23.6 1 46.3 ? C9 MQY 1 A 1 HETATM 10 O O10 MQY . . . B 2 5.474 -0.95 24.269 1 47.7 ? O10 MQY 1 A 1 HETATM 11 C C11 MQY . . . B 2 7.635 -3.506 21.419 1 44.38 ? C11 MQY 1 A 1 HETATM 12 C C12 MQY . . . B 2 9.711 -2.509 22.286 1 44.2 ? C12 MQY 1 A 1 HETATM 13 C C13 MQY . . . B 2 6.079 3.454 22.228 1 46.46 ? C13 MQY 1 A 1 HETATM 14 C C14 MQY . . . B 2 3.856 1.408 23.222 1 46.76 ? C14 MQY 1 A 1 HETATM 15 C C15 MQY . . . B 2 9.017 -3.596 21.689 1 44.95 ? C15 MQY 1 A 1 HETATM 16 C C16 MQY . . . B 2 7.013 4.433 22.952 1 47.24 ? C16 MQY 1 A 1 HETATM 17 S S17 MQY . . . B 2 9.876 -5.088 21.263 1 45.51 ? S17 MQY 1 A 1 HETATM 18 C C18 MQY . . . B 2 6.942 5.855 22.658 1 47.41 ? C18 MQY 1 A 1 HETATM 19 C C19 MQY . . . B 2 7.974 3.997 23.922 1 47.16 ? C19 MQY 1 A 1 HETATM 20 C C20 MQY . . . B 2 10.301 -4.883 19.531 1 46.05 ? C20 MQY 1 A 1 HETATM 21 O O21 MQY . . . B 2 11.1 -5.15 21.998 1 45.25 ? O21 MQY 1 A 1 HETATM 22 O O22 MQY . . . B 2 8.965 -6.192 21.354 1 45.85 ? O22 MQY 1 A 1 HETATM 23 C C23 MQY . . . B 2 7.831 6.786 23.351 1 47.61 ? C23 MQY 1 A 1 HETATM 24 C C24 MQY . . . B 2 6.001 6.382 21.695 1 47.61 ? C24 MQY 1 A 1 HETATM 25 C C25 MQY . . . B 2 8.807 4.945 24.556 1 47.01 ? C25 MQY 1 A 1 HETATM 26 F F26 MQY . . . B 2 10.936 -5.969 19.144 1 45.31 ? F26 MQY 1 A 1 HETATM 27 F F27 MQY . . . B 2 11.103 -3.829 19.424 1 46.27 ? F27 MQY 1 A 1 HETATM 28 F F28 MQY . . . B 2 9.188 -4.698 18.826 1 45.88 ? F28 MQY 1 A 1 HETATM 29 N N29 MQY . . . B 2 8.738 6.277 24.28 1 47.52 ? N29 MQY 1 A 1 HETATM 30 C C30 MQY . . . B 2 7.753 8.184 23.055 1 48.05 ? C30 MQY 1 A 1 HETATM 31 C C31 MQY . . . B 2 5.947 7.776 21.424 1 48.03 ? C31 MQY 1 A 1 HETATM 32 C C32 MQY . . . B 2 6.818 8.675 22.1 1 48.16 ? C32 MQY 1 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 324 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #