data_3O2W # _model_server_result.job_id WVUQ6-v5d7bXoI8RecMskQ _model_server_result.datetime_utc '2025-07-19 07:36:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":215}' # _entry.id 3O2W # _exptl.entry_id 3O2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 401.413 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'methyl ({[(3aR,4R,7R,7aR)-2-(4-aminophenyl)-1,3-dioxooctahydro-4H-4,7-ethanoisoindol-4-yl]carbamoyl}oxy)acetate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3O2W _cell.length_a 128.203 _cell.length_b 128.203 _cell.length_c 92.144 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 B SG CYS 146 H CYS 142 1_555 B SG CYS 202 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? covale ? covale1 B C VAL 158 H VAL 154 1_555 B N SER 159 H SER 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 B C TRP 160 H TRP 157 1_555 B N ASN 161 H ASN 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C GLY 168 H GLY 169 1_555 B N VAL 169 H VAL 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 B C SER 179 H SER 181 1_555 B N GLY 180 H GLY 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 B C SER 193 H SER 196 1_555 B N SER 194 H SER 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale6 B C LEU 195 H LEU 200 1_555 B N GLY 196 H GLY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C VAL 217 H VAL 223 1_555 B N GLU 218 H GLU 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C20 H23 N3 O6' _chem_comp.formula_weight 401.413 _chem_comp.id O2W _chem_comp.mon_nstd_flag . _chem_comp.name 'methyl ({[(3aR,4R,7R,7aR)-2-(4-aminophenyl)-1,3-dioxooctahydro-4H-4,7-ethanoisoindol-4-yl]carbamoyl}oxy)acetate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAQ CAA O2W sing 254 n n CAA HAA O2W sing 255 n n CAA HAAA O2W sing 256 n n CAA HAAB O2W sing 257 n n CAW NAB O2W sing 258 n n NAB HNAB O2W sing 259 n n NAB HNAA O2W sing 260 n n OAC CAS O2W doub 261 n n OAD CAT O2W doub 262 n n CAU OAE O2W doub 263 n n CAV OAF O2W doub 264 n n CAY CAG O2W sing 265 n n CAH CAG O2W sing 266 n n CAG HAG O2W sing 267 n n CAG HAGA O2W sing 268 n n CBC CAH O2W sing 269 n n CAH HAH O2W sing 270 n n CAH HAHA O2W sing 271 n n CAK CAI O2W doub 272 n y CAI CAW O2W sing 273 n y CAI HAI O2W sing 274 n n CAL CAJ O2W sing 275 n y CAJ CAW O2W doub 276 n y CAJ HAJ O2W sing 277 n n CAX CAK O2W sing 278 n y CAK HAK O2W sing 279 n n CAX CAL O2W doub 280 n y CAL HAL O2W sing 281 n n CAO CAM O2W sing 282 n n CAM CAY O2W sing 283 n n CAM HAM O2W sing 284 n n CAM HAMA O2W sing 285 n n CAN CAS O2W sing 286 n n CAN OAR O2W sing 287 n n CAN HAN O2W sing 288 n n CAN HANA O2W sing 289 n n CAO CBC O2W sing 290 n n CAO HAO O2W sing 291 n n CAO HAOA O2W sing 292 n n CAT NAP O2W sing 293 n n NAP CBC O2W sing 294 n n NAP HNAP O2W sing 295 n n CAS OAQ O2W sing 296 n n CAT OAR O2W sing 297 n n CAZ CAU O2W sing 298 n n CAU NBB O2W sing 299 n n CBA CAV O2W sing 300 n n CAV NBB O2W sing 301 n n NBB CAX O2W sing 302 n n CAZ CAY O2W sing 303 n n CAY HAY O2W sing 304 n n CBA CAZ O2W sing 305 n n CAZ HAZ O2W sing 306 n n CBC CBA O2W sing 307 n n CBA HBA O2W sing 308 n n # _atom_sites.entry_id 3O2W _atom_sites.fract_transf_matrix[1][1] 0.0078 _atom_sites.fract_transf_matrix[1][2] 0.004503 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 O2W L 1 215 215 O2W O2W . D 4 TRS L 1 216 216 TRS TRS . E 4 TRS L 1 217 217 TRS TRS . F 4 TRS L 1 218 218 TRS TRS . G 4 TRS L 1 219 219 TRS TRS . H 5 SO4 L 1 220 220 SO4 SO4 . I 5 SO4 L 1 221 221 SO4 SO4 . J 5 SO4 L 1 222 222 SO4 SO4 . K 5 SO4 L 1 223 223 SO4 SO4 . L 5 SO4 L 1 224 224 SO4 SO4 . M 5 SO4 L 1 225 225 SO4 SO4 . N 4 TRS H 1 236 236 TRS TRS . O 4 TRS H 1 237 237 TRS TRS . P 4 TRS H 1 238 238 TRS TRS . Q 4 TRS H 1 239 239 TRS TRS . R 4 TRS H 1 240 240 TRS TRS . S 6 FLC H 1 241 241 FLC FLC . T 6 FLC H 1 242 242 FLC FLC . U 6 FLC H 1 243 243 FLC FLC . V 5 SO4 H 1 244 244 SO4 SO4 . W 5 SO4 H 1 245 245 SO4 SO4 . X 5 SO4 H 1 246 246 SO4 SO4 . Y 5 SO4 H 1 247 247 SO4 SO4 . Z 7 HOH L 1 226 226 HOH HOH . Z 7 HOH L 2 227 227 HOH HOH . Z 7 HOH L 3 228 228 HOH HOH . Z 7 HOH L 4 229 229 HOH HOH . Z 7 HOH L 5 230 230 HOH HOH . Z 7 HOH L 6 231 231 HOH HOH . Z 7 HOH L 7 232 232 HOH HOH . Z 7 HOH L 8 233 233 HOH HOH . Z 7 HOH L 9 234 234 HOH HOH . Z 7 HOH L 10 235 235 HOH HOH . Z 7 HOH L 11 236 236 HOH HOH . Z 7 HOH L 12 237 237 HOH HOH . Z 7 HOH L 13 238 238 HOH HOH . Z 7 HOH L 14 239 239 HOH HOH . Z 7 HOH L 15 240 240 HOH HOH . Z 7 HOH L 16 241 241 HOH HOH . Z 7 HOH L 17 242 242 HOH HOH . Z 7 HOH L 18 243 243 HOH HOH . Z 7 HOH L 19 244 244 HOH HOH . Z 7 HOH L 20 245 245 HOH HOH . Z 7 HOH L 21 246 246 HOH HOH . Z 7 HOH L 22 247 247 HOH HOH . Z 7 HOH L 23 248 248 HOH HOH . Z 7 HOH L 24 249 249 HOH HOH . Z 7 HOH L 25 250 250 HOH HOH . Z 7 HOH L 26 251 251 HOH HOH . Z 7 HOH L 27 252 252 HOH HOH . Z 7 HOH L 28 253 253 HOH HOH . Z 7 HOH L 29 254 254 HOH HOH . Z 7 HOH L 30 255 255 HOH HOH . AA 7 HOH H 1 248 248 HOH HOH . AA 7 HOH H 2 249 249 HOH HOH . AA 7 HOH H 3 250 250 HOH HOH . AA 7 HOH H 4 251 251 HOH HOH . AA 7 HOH H 5 252 252 HOH HOH . AA 7 HOH H 6 253 253 HOH HOH . AA 7 HOH H 7 254 254 HOH HOH . AA 7 HOH H 8 255 255 HOH HOH . AA 7 HOH H 9 256 256 HOH HOH . AA 7 HOH H 10 257 257 HOH HOH . AA 7 HOH H 11 258 258 HOH HOH . AA 7 HOH H 12 259 259 HOH HOH . AA 7 HOH H 13 260 260 HOH HOH . AA 7 HOH H 14 261 261 HOH HOH . AA 7 HOH H 15 262 262 HOH HOH . AA 7 HOH H 16 263 263 HOH HOH . AA 7 HOH H 17 264 264 HOH HOH . AA 7 HOH H 18 265 265 HOH HOH . AA 7 HOH H 19 266 266 HOH HOH . AA 7 HOH H 20 267 267 HOH HOH . AA 7 HOH H 21 268 268 HOH HOH . AA 7 HOH H 22 269 269 HOH HOH . AA 7 HOH H 23 270 270 HOH HOH . AA 7 HOH H 24 271 271 HOH HOH . AA 7 HOH H 25 272 272 HOH HOH . AA 7 HOH H 26 273 273 HOH HOH . AA 7 HOH H 27 274 274 HOH HOH . AA 7 HOH H 28 275 275 HOH HOH . AA 7 HOH H 29 276 276 HOH HOH . AA 7 HOH H 30 277 277 HOH HOH . AA 7 HOH H 31 278 278 HOH HOH . AA 7 HOH H 32 279 279 HOH HOH . AA 7 HOH H 33 280 280 HOH HOH . AA 7 HOH H 34 281 281 HOH HOH . AA 7 HOH H 35 282 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA O2W . . . C 3 77.204 -0.559 -22.696 1 117.66 ? CAA O2W 215 L 1 HETATM 2 N NAB O2W . . . C 3 67.877 1.977 -15.804 1 116.89 ? NAB O2W 215 L 1 HETATM 3 O OAC O2W . . . C 3 75.82 -0.158 -25.036 1 116.15 ? OAC O2W 215 L 1 HETATM 4 O OAD O2W . . . C 3 70.902 -1.335 -24.191 1 113.44 ? OAD O2W 215 L 1 HETATM 5 O OAE O2W . . . C 3 66.306 -2.883 -19.608 1 115.54 ? OAE O2W 215 L 1 HETATM 6 O OAF O2W . . . C 3 69.922 -0.478 -20.918 1 116.19 ? OAF O2W 215 L 1 HETATM 7 C CAG O2W . . . C 3 68.926 -4.927 -20.53 1 116.51 ? CAG O2W 215 L 1 HETATM 8 C CAH O2W . . . C 3 70.217 -4.13 -20.852 1 115.96 ? CAH O2W 215 L 1 HETATM 9 C CAI O2W . . . C 3 66.89 1.009 -17.69 1 117.14 ? CAI O2W 215 L 1 HETATM 10 C CAJ O2W . . . C 3 69.107 0.331 -16.997 1 117.82 ? CAJ O2W 215 L 1 HETATM 11 C CAK O2W . . . C 3 66.973 0.112 -18.744 1 116.79 ? CAK O2W 215 L 1 HETATM 12 C CAL O2W . . . C 3 69.186 -0.579 -18.05 1 117.19 ? CAL O2W 215 L 1 HETATM 13 C CAM O2W . . . C 3 68.374 -5.003 -22.986 1 117.05 ? CAM O2W 215 L 1 HETATM 14 C CAN O2W . . . C 3 73.599 -0.412 -24.188 1 115.81 ? CAN O2W 215 L 1 HETATM 15 C CAO O2W . . . C 3 69.721 -4.275 -23.307 1 116.38 ? CAO O2W 215 L 1 HETATM 16 N NAP O2W . . . C 3 71.322 -2.587 -22.349 1 115.15 ? NAP O2W 215 L 1 HETATM 17 O OAQ O2W . . . C 3 75.773 -0.861 -22.867 1 118.14 ? OAQ O2W 215 L 1 HETATM 18 O OAR O2W . . . C 3 72.934 -1.197 -23.151 1 115.49 ? OAR O2W 215 L 1 HETATM 19 C CAS O2W . . . C 3 75.151 -0.467 -24.049 1 116.82 ? CAS O2W 215 L 1 HETATM 20 C CAT O2W . . . C 3 71.655 -1.696 -23.285 1 114.8 ? CAT O2W 215 L 1 HETATM 21 C CAU O2W . . . C 3 67.248 -2.493 -20.288 1 116.08 ? CAU O2W 215 L 1 HETATM 22 C CAV O2W . . . C 3 69.022 -1.322 -20.949 1 116.88 ? CAV O2W 215 L 1 HETATM 23 C CAW O2W . . . C 3 67.962 1.119 -16.813 1 117.5 ? CAW O2W 215 L 1 HETATM 24 C CAX O2W . . . C 3 68.098 -0.698 -18.916 1 116.96 ? CAX O2W 215 L 1 HETATM 25 C CAY O2W . . . C 3 67.853 -4.611 -21.591 1 116.74 ? CAY O2W 215 L 1 HETATM 26 C CAZ O2W . . . C 3 67.576 -3.106 -21.646 1 116.51 ? CAZ O2W 215 L 1 HETATM 27 C CBA O2W . . . C 3 68.835 -2.325 -22.082 1 116.5 ? CBA O2W 215 L 1 HETATM 28 N NBB O2W . . . C 3 68.116 -1.507 -19.979 1 116.9 ? NBB O2W 215 L 1 HETATM 29 C CBC O2W . . . C 3 70.044 -3.302 -22.167 1 116.08 ? CBC O2W 215 L 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 327 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #