data_3O2W # _model_server_result.job_id 07uT5k6rYgq-Cpd83ErJ6A _model_server_result.datetime_utc '2025-07-18 17:23:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":219}' # _entry.id 3O2W # _exptl.entry_id 3O2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3O2W _cell.length_a 128.203 _cell.length_b 128.203 _cell.length_c 92.144 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 L CYS 23 1_555 A SG CYS 93 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? disulf ? disulf2 A SG CYS 139 L CYS 134 1_555 A SG CYS 199 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? disulf ? disulf4 B SG CYS 146 H CYS 142 1_555 B SG CYS 202 H CYS 208 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? covale ? covale1 B C VAL 158 H VAL 154 1_555 B N SER 159 H SER 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale2 B C TRP 160 H TRP 157 1_555 B N ASN 161 H ASN 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale3 B C GLY 168 H GLY 169 1_555 B N VAL 169 H VAL 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 B C SER 179 H SER 181 1_555 B N GLY 180 H GLY 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 B C SER 193 H SER 196 1_555 B N SER 194 H SER 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale6 B C LEU 195 H LEU 200 1_555 B N GLY 196 H GLY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C VAL 217 H VAL 223 1_555 B N GLU 218 H GLU 226 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 410 n n C C2 TRS sing 411 n n C C3 TRS sing 412 n n C N TRS sing 413 n n C1 O1 TRS sing 414 n n C1 H11 TRS sing 415 n n C1 H12 TRS sing 416 n n C2 O2 TRS sing 417 n n C2 H21 TRS sing 418 n n C2 H22 TRS sing 419 n n C3 O3 TRS sing 420 n n C3 H31 TRS sing 421 n n C3 H32 TRS sing 422 n n N HN1 TRS sing 423 n n N HN2 TRS sing 424 n n N HN3 TRS sing 425 n n O1 HO1 TRS sing 426 n n O2 HO2 TRS sing 427 n n O3 HO3 TRS sing 428 n n # _atom_sites.entry_id 3O2W _atom_sites.fract_transf_matrix[1][1] 0.0078 _atom_sites.fract_transf_matrix[1][2] 0.004503 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009007 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010853 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 O2W L 1 215 215 O2W O2W . D 4 TRS L 1 216 216 TRS TRS . E 4 TRS L 1 217 217 TRS TRS . F 4 TRS L 1 218 218 TRS TRS . G 4 TRS L 1 219 219 TRS TRS . H 5 SO4 L 1 220 220 SO4 SO4 . I 5 SO4 L 1 221 221 SO4 SO4 . J 5 SO4 L 1 222 222 SO4 SO4 . K 5 SO4 L 1 223 223 SO4 SO4 . L 5 SO4 L 1 224 224 SO4 SO4 . M 5 SO4 L 1 225 225 SO4 SO4 . N 4 TRS H 1 236 236 TRS TRS . O 4 TRS H 1 237 237 TRS TRS . P 4 TRS H 1 238 238 TRS TRS . Q 4 TRS H 1 239 239 TRS TRS . R 4 TRS H 1 240 240 TRS TRS . S 6 FLC H 1 241 241 FLC FLC . T 6 FLC H 1 242 242 FLC FLC . U 6 FLC H 1 243 243 FLC FLC . V 5 SO4 H 1 244 244 SO4 SO4 . W 5 SO4 H 1 245 245 SO4 SO4 . X 5 SO4 H 1 246 246 SO4 SO4 . Y 5 SO4 H 1 247 247 SO4 SO4 . Z 7 HOH L 1 226 226 HOH HOH . Z 7 HOH L 2 227 227 HOH HOH . Z 7 HOH L 3 228 228 HOH HOH . Z 7 HOH L 4 229 229 HOH HOH . Z 7 HOH L 5 230 230 HOH HOH . Z 7 HOH L 6 231 231 HOH HOH . Z 7 HOH L 7 232 232 HOH HOH . Z 7 HOH L 8 233 233 HOH HOH . Z 7 HOH L 9 234 234 HOH HOH . Z 7 HOH L 10 235 235 HOH HOH . Z 7 HOH L 11 236 236 HOH HOH . Z 7 HOH L 12 237 237 HOH HOH . Z 7 HOH L 13 238 238 HOH HOH . Z 7 HOH L 14 239 239 HOH HOH . Z 7 HOH L 15 240 240 HOH HOH . Z 7 HOH L 16 241 241 HOH HOH . Z 7 HOH L 17 242 242 HOH HOH . Z 7 HOH L 18 243 243 HOH HOH . Z 7 HOH L 19 244 244 HOH HOH . Z 7 HOH L 20 245 245 HOH HOH . Z 7 HOH L 21 246 246 HOH HOH . Z 7 HOH L 22 247 247 HOH HOH . Z 7 HOH L 23 248 248 HOH HOH . Z 7 HOH L 24 249 249 HOH HOH . Z 7 HOH L 25 250 250 HOH HOH . Z 7 HOH L 26 251 251 HOH HOH . Z 7 HOH L 27 252 252 HOH HOH . Z 7 HOH L 28 253 253 HOH HOH . Z 7 HOH L 29 254 254 HOH HOH . Z 7 HOH L 30 255 255 HOH HOH . AA 7 HOH H 1 248 248 HOH HOH . AA 7 HOH H 2 249 249 HOH HOH . AA 7 HOH H 3 250 250 HOH HOH . AA 7 HOH H 4 251 251 HOH HOH . AA 7 HOH H 5 252 252 HOH HOH . AA 7 HOH H 6 253 253 HOH HOH . AA 7 HOH H 7 254 254 HOH HOH . AA 7 HOH H 8 255 255 HOH HOH . AA 7 HOH H 9 256 256 HOH HOH . AA 7 HOH H 10 257 257 HOH HOH . AA 7 HOH H 11 258 258 HOH HOH . AA 7 HOH H 12 259 259 HOH HOH . AA 7 HOH H 13 260 260 HOH HOH . AA 7 HOH H 14 261 261 HOH HOH . AA 7 HOH H 15 262 262 HOH HOH . AA 7 HOH H 16 263 263 HOH HOH . AA 7 HOH H 17 264 264 HOH HOH . AA 7 HOH H 18 265 265 HOH HOH . AA 7 HOH H 19 266 266 HOH HOH . AA 7 HOH H 20 267 267 HOH HOH . AA 7 HOH H 21 268 268 HOH HOH . AA 7 HOH H 22 269 269 HOH HOH . AA 7 HOH H 23 270 270 HOH HOH . AA 7 HOH H 24 271 271 HOH HOH . AA 7 HOH H 25 272 272 HOH HOH . AA 7 HOH H 26 273 273 HOH HOH . AA 7 HOH H 27 274 274 HOH HOH . AA 7 HOH H 28 275 275 HOH HOH . AA 7 HOH H 29 276 276 HOH HOH . AA 7 HOH H 30 277 277 HOH HOH . AA 7 HOH H 31 278 278 HOH HOH . AA 7 HOH H 32 279 279 HOH HOH . AA 7 HOH H 33 280 280 HOH HOH . AA 7 HOH H 34 281 281 HOH HOH . AA 7 HOH H 35 282 282 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . G 4 85.457 -12.297 -15.826 1 122.11 ? C TRS 219 L 1 HETATM 2 C C1 TRS . . . G 4 85.941 -12.123 -17.27 1 122.15 ? C1 TRS 219 L 1 HETATM 3 C C2 TRS . . . G 4 84.671 -11.049 -15.431 1 122.08 ? C2 TRS 219 L 1 HETATM 4 C C3 TRS . . . G 4 86.645 -12.484 -14.879 1 122.25 ? C3 TRS 219 L 1 HETATM 5 N N TRS . . . G 4 84.568 -13.489 -15.719 1 121.9 ? N TRS 219 L 1 HETATM 6 O O1 TRS . . . G 4 86.189 -13.389 -17.9 1 122.04 ? O1 TRS 219 L 1 HETATM 7 O O2 TRS . . . G 4 84.2 -11.178 -14.085 1 121.97 ? O2 TRS 219 L 1 HETATM 8 O O3 TRS . . . G 4 86.661 -13.816 -14.344 1 122 ? O3 TRS 219 L 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #