data_3O2Y # _model_server_result.job_id 0Zk_k6QaYDfRaxs0I9GlNw _model_server_result.datetime_utc '2024-11-14 07:07:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o2y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 3O2Y # _exptl.entry_id 3O2Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.424 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O2Y _cell.length_a 90.221 _cell.length_b 90.221 _cell.length_c 35.635 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O2Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,H 1 1 B,E,F,G,I 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 61 A CYS 89 1_555 A SG CYS 158 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf2 B SG CYS 61 B CYS 89 1_555 B SG CYS 158 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 326 n n C1 O2 PLM doub 327 n n C1 C2 PLM sing 328 n n O1 H PLM sing 329 n n C2 C3 PLM sing 330 n n C2 H21 PLM sing 331 n n C2 H22 PLM sing 332 n n C3 C4 PLM sing 333 n n C3 H31 PLM sing 334 n n C3 H32 PLM sing 335 n n C4 C5 PLM sing 336 n n C4 H41 PLM sing 337 n n C4 H42 PLM sing 338 n n C5 C6 PLM sing 339 n n C5 H51 PLM sing 340 n n C5 H52 PLM sing 341 n n C6 C7 PLM sing 342 n n C6 H61 PLM sing 343 n n C6 H62 PLM sing 344 n n C7 C8 PLM sing 345 n n C7 H71 PLM sing 346 n n C7 H72 PLM sing 347 n n C8 C9 PLM sing 348 n n C8 H81 PLM sing 349 n n C8 H82 PLM sing 350 n n C9 CA PLM sing 351 n n C9 H91 PLM sing 352 n n C9 H92 PLM sing 353 n n CA CB PLM sing 354 n n CA HA1 PLM sing 355 n n CA HA2 PLM sing 356 n n CB CC PLM sing 357 n n CB HB1 PLM sing 358 n n CB HB2 PLM sing 359 n n CC CD PLM sing 360 n n CC HC1 PLM sing 361 n n CC HC2 PLM sing 362 n n CD CE PLM sing 363 n n CD HD1 PLM sing 364 n n CD HD2 PLM sing 365 n n CE CF PLM sing 366 n n CE HE1 PLM sing 367 n n CE HE2 PLM sing 368 n n CF CG PLM sing 369 n n CF HF1 PLM sing 370 n n CF HF2 PLM sing 371 n n CG HG1 PLM sing 372 n n CG HG2 PLM sing 373 n n CG HG3 PLM sing 374 n n # _atom_sites.entry_id 3O2Y _atom_sites.fract_transf_matrix[1][1] 0.011084 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028062 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 OLA A 1 200 200 OLA OLA . D 3 PLM A 1 201 201 PLM PLM . E 2 OLA B 1 202 202 OLA OLA . F 3 PLM B 1 203 203 PLM PLM . G 4 GOL B 1 252 252 GOL GOL . H 5 HOH A 1 1 1 HOH HOH . H 5 HOH A 2 3 3 HOH HOH . H 5 HOH A 3 4 4 HOH HOH . H 5 HOH A 4 5 5 HOH HOH . H 5 HOH A 5 6 6 HOH HOH . H 5 HOH A 6 7 7 HOH HOH . H 5 HOH A 7 8 8 HOH HOH . H 5 HOH A 8 9 9 HOH HOH . H 5 HOH A 9 10 10 HOH HOH . H 5 HOH A 10 15 15 HOH HOH . H 5 HOH A 11 16 16 HOH HOH . H 5 HOH A 12 18 18 HOH HOH . H 5 HOH A 13 19 19 HOH HOH . H 5 HOH A 14 20 20 HOH HOH . H 5 HOH A 15 21 21 HOH HOH . H 5 HOH A 16 22 22 HOH HOH . H 5 HOH A 17 25 25 HOH HOH . H 5 HOH A 18 26 26 HOH HOH . H 5 HOH A 19 27 27 HOH HOH . H 5 HOH A 20 28 28 HOH HOH . H 5 HOH A 21 191 31 HOH HOH . H 5 HOH A 22 192 32 HOH HOH . H 5 HOH A 23 193 33 HOH HOH . H 5 HOH A 24 194 34 HOH HOH . H 5 HOH A 25 195 35 HOH HOH . H 5 HOH A 26 196 36 HOH HOH . H 5 HOH A 27 197 37 HOH HOH . H 5 HOH A 28 198 38 HOH HOH . H 5 HOH A 29 199 41 HOH HOH . H 5 HOH A 30 202 42 HOH HOH . H 5 HOH A 31 203 43 HOH HOH . H 5 HOH A 32 204 44 HOH HOH . H 5 HOH A 33 205 48 HOH HOH . H 5 HOH A 34 206 51 HOH HOH . H 5 HOH A 35 207 53 HOH HOH . H 5 HOH A 36 208 54 HOH HOH . H 5 HOH A 37 209 55 HOH HOH . H 5 HOH A 38 210 57 HOH HOH . H 5 HOH A 39 211 58 HOH HOH . H 5 HOH A 40 212 60 HOH HOH . H 5 HOH A 41 213 63 HOH HOH . H 5 HOH A 42 214 65 HOH HOH . H 5 HOH A 43 215 66 HOH HOH . H 5 HOH A 44 216 67 HOH HOH . H 5 HOH A 45 217 68 HOH HOH . H 5 HOH A 46 218 69 HOH HOH . H 5 HOH A 47 219 70 HOH HOH . H 5 HOH A 48 220 71 HOH HOH . H 5 HOH A 49 221 72 HOH HOH . H 5 HOH A 50 222 73 HOH HOH . H 5 HOH A 51 223 74 HOH HOH . H 5 HOH A 52 224 75 HOH HOH . H 5 HOH A 53 225 76 HOH HOH . H 5 HOH A 54 226 77 HOH HOH . H 5 HOH A 55 227 78 HOH HOH . H 5 HOH A 56 228 79 HOH HOH . H 5 HOH A 57 229 81 HOH HOH . H 5 HOH A 58 230 82 HOH HOH . H 5 HOH A 59 231 83 HOH HOH . H 5 HOH A 60 232 84 HOH HOH . H 5 HOH A 61 233 86 HOH HOH . H 5 HOH A 62 234 87 HOH HOH . H 5 HOH A 63 235 88 HOH HOH . H 5 HOH A 64 236 89 HOH HOH . H 5 HOH A 65 237 90 HOH HOH . H 5 HOH A 66 238 92 HOH HOH . H 5 HOH A 67 239 93 HOH HOH . H 5 HOH A 68 240 94 HOH HOH . H 5 HOH A 69 241 96 HOH HOH . H 5 HOH A 70 242 99 HOH HOH . H 5 HOH A 71 243 103 HOH HOH . H 5 HOH A 72 244 105 HOH HOH . H 5 HOH A 73 245 106 HOH HOH . H 5 HOH A 74 246 107 HOH HOH . H 5 HOH A 75 247 108 HOH HOH . H 5 HOH A 76 248 111 HOH HOH . H 5 HOH A 77 249 112 HOH HOH . H 5 HOH A 78 250 113 HOH HOH . H 5 HOH A 79 251 114 HOH HOH . H 5 HOH A 80 252 115 HOH HOH . H 5 HOH A 81 253 116 HOH HOH . H 5 HOH A 82 254 118 HOH HOH . H 5 HOH A 83 255 120 HOH HOH . H 5 HOH A 84 256 121 HOH HOH . H 5 HOH A 85 257 122 HOH HOH . H 5 HOH A 86 258 123 HOH HOH . H 5 HOH A 87 259 124 HOH HOH . H 5 HOH A 88 260 125 HOH HOH . H 5 HOH A 89 261 126 HOH HOH . H 5 HOH A 90 262 127 HOH HOH . H 5 HOH A 91 263 128 HOH HOH . H 5 HOH A 92 264 129 HOH HOH . H 5 HOH A 93 265 131 HOH HOH . H 5 HOH A 94 266 132 HOH HOH . H 5 HOH A 95 267 138 HOH HOH . H 5 HOH A 96 268 139 HOH HOH . H 5 HOH A 97 269 143 HOH HOH . H 5 HOH A 98 270 144 HOH HOH . H 5 HOH A 99 271 145 HOH HOH . H 5 HOH A 100 272 146 HOH HOH . H 5 HOH A 101 273 147 HOH HOH . H 5 HOH A 102 274 148 HOH HOH . H 5 HOH A 103 275 153 HOH HOH . H 5 HOH A 104 276 154 HOH HOH . H 5 HOH A 105 277 155 HOH HOH . H 5 HOH A 106 278 156 HOH HOH . H 5 HOH A 107 279 157 HOH HOH . I 5 HOH B 1 2 2 HOH HOH . I 5 HOH B 2 11 11 HOH HOH . I 5 HOH B 3 12 12 HOH HOH . I 5 HOH B 4 13 13 HOH HOH . I 5 HOH B 5 14 14 HOH HOH . I 5 HOH B 6 17 17 HOH HOH . I 5 HOH B 7 23 23 HOH HOH . I 5 HOH B 8 24 24 HOH HOH . I 5 HOH B 9 191 29 HOH HOH . I 5 HOH B 10 192 30 HOH HOH . I 5 HOH B 11 193 39 HOH HOH . I 5 HOH B 12 194 40 HOH HOH . I 5 HOH B 13 195 45 HOH HOH . I 5 HOH B 14 196 46 HOH HOH . I 5 HOH B 15 197 47 HOH HOH . I 5 HOH B 16 198 49 HOH HOH . I 5 HOH B 17 199 50 HOH HOH . I 5 HOH B 18 200 52 HOH HOH . I 5 HOH B 19 201 56 HOH HOH . I 5 HOH B 20 204 59 HOH HOH . I 5 HOH B 21 205 61 HOH HOH . I 5 HOH B 22 206 62 HOH HOH . I 5 HOH B 23 207 64 HOH HOH . I 5 HOH B 24 208 80 HOH HOH . I 5 HOH B 25 209 85 HOH HOH . I 5 HOH B 26 210 91 HOH HOH . I 5 HOH B 27 211 95 HOH HOH . I 5 HOH B 28 212 97 HOH HOH . I 5 HOH B 29 213 98 HOH HOH . I 5 HOH B 30 214 100 HOH HOH . I 5 HOH B 31 215 101 HOH HOH . I 5 HOH B 32 216 104 HOH HOH . I 5 HOH B 33 217 109 HOH HOH . I 5 HOH B 34 218 110 HOH HOH . I 5 HOH B 35 219 117 HOH HOH . I 5 HOH B 36 220 119 HOH HOH . I 5 HOH B 37 221 130 HOH HOH . I 5 HOH B 38 222 133 HOH HOH . I 5 HOH B 39 223 134 HOH HOH . I 5 HOH B 40 224 135 HOH HOH . I 5 HOH B 41 225 136 HOH HOH . I 5 HOH B 42 226 137 HOH HOH . I 5 HOH B 43 227 140 HOH HOH . I 5 HOH B 44 228 141 HOH HOH . I 5 HOH B 45 229 142 HOH HOH . I 5 HOH B 46 230 149 HOH HOH . I 5 HOH B 47 231 151 HOH HOH . I 5 HOH B 48 232 152 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . F 3 11.112 -56.155 10.297 0.72 33.47 ? C1 PLM 203 B 1 HETATM 2 O O1 PLM . . . F 3 10.019 -55.937 9.765 0.62 29.67 ? O1 PLM 203 B 1 HETATM 3 O O2 PLM . . . F 3 12.059 -56.45 9.536 0.9 32.67 ? O2 PLM 203 B 1 HETATM 4 C C2 PLM . . . F 3 11.207 -56.102 11.804 1 33.27 ? C2 PLM 203 B 1 HETATM 5 C C3 PLM . . . F 3 12.612 -55.767 12.264 0.74 38.6 ? C3 PLM 203 B 1 HETATM 6 C C4 PLM . . . F 3 12.553 -54.733 13.37 1 39.14 ? C4 PLM 203 B 1 HETATM 7 C C5 PLM . . . F 3 12.925 -53.359 12.814 0.95 40.05 ? C5 PLM 203 B 1 HETATM 8 C C6 PLM . . . F 3 13.804 -52.532 13.746 0.65 37.05 ? C6 PLM 203 B 1 HETATM 9 C C7 PLM . . . F 3 15.264 -52.982 13.736 1 36.51 ? C7 PLM 203 B 1 HETATM 10 C C8 PLM . . . F 3 16.167 -52.144 12.823 0.62 36.96 ? C8 PLM 203 B 1 HETATM 11 C C9 PLM . . . F 3 17.666 -52.133 13.185 1 37.25 ? C9 PLM 203 B 1 HETATM 12 C CA PLM . . . F 3 18.495 -52.283 11.887 0.91 35.94 ? CA PLM 203 B 1 HETATM 13 C CB PLM . . . F 3 19.866 -51.601 11.996 1 38.16 ? CB PLM 203 B 1 HETATM 14 C CC PLM . . . F 3 20.992 -52.308 11.236 0.82 35.66 ? CC PLM 203 B 1 HETATM 15 C CD PLM . . . F 3 21.047 -51.962 9.753 1 38.44 ? CD PLM 203 B 1 HETATM 16 C CE PLM . . . F 3 22.229 -51.03 9.487 1 36.8 ? CE PLM 203 B 1 HETATM 17 C CF PLM . . . F 3 22.35 -50.722 7.999 0.99 37.46 ? CF PLM 203 B 1 HETATM 18 C CG PLM . . . F 3 23.205 -49.473 7.814 1 38.57 ? CG PLM 203 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #