data_3O3P # _model_server_result.job_id OQ5YegIK0jNj45NxjETiZA _model_server_result.datetime_utc '2024-12-21 18:54:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":338}' # _entry.id 3O3P # _exptl.entry_id 3O3P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3O3P _cell.length_a 108.37 _cell.length_b 108.37 _cell.length_c 311.96 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 189 A ASP 137 1_555 F MG MG . A MG 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.28 ? metalc ? metalc2 A OD1 ASN 308 A ASN 256 1_555 F MG MG . A MG 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.252 ? metalc ? metalc3 A O GLN 351 A GLN 299 1_555 E MG MG . A MG 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc4 A O ASP 354 A ASP 302 1_555 E MG MG . A MG 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc5 E MG MG . A MG 338 1_555 I O HOH . A HOH 390 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc6 E MG MG . A MG 338 1_555 I O HOH . A HOH 391 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc7 E MG MG . A MG 338 1_555 J O HOH . B HOH 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc8 E MG MG . A MG 338 1_555 J O HOH . B HOH 373 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc9 F MG MG . A MG 339 1_555 G O2B GDD . A GDD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc10 F MG MG . A MG 339 1_555 G O2A GDD . A GDD 340 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.693 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3O3P _atom_sites.fract_transf_matrix[1][1] 0.009228 _atom_sites.fract_transf_matrix[1][2] 0.005328 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010655 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003206 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 336 1 CL CL . D 2 CL A 1 337 1 CL CL . E 3 MG A 1 338 1 MG MG . F 3 MG A 1 339 1 MG MG . G 4 GDD A 1 340 1 GDD GDD . H 5 GDP B 1 336 1 GDP GDP . I 6 HOH A 1 341 1 HOH HOH . I 6 HOH A 2 342 2 HOH HOH . I 6 HOH A 3 343 3 HOH HOH . I 6 HOH A 4 344 8 HOH HOH . I 6 HOH A 5 345 9 HOH HOH . I 6 HOH A 6 346 10 HOH HOH . I 6 HOH A 7 347 11 HOH HOH . I 6 HOH A 8 348 16 HOH HOH . I 6 HOH A 9 349 18 HOH HOH . I 6 HOH A 10 350 21 HOH HOH . I 6 HOH A 11 351 24 HOH HOH . I 6 HOH A 12 352 26 HOH HOH . I 6 HOH A 13 353 31 HOH HOH . I 6 HOH A 14 354 32 HOH HOH . I 6 HOH A 15 355 33 HOH HOH . I 6 HOH A 16 356 34 HOH HOH . I 6 HOH A 17 357 36 HOH HOH . I 6 HOH A 18 358 37 HOH HOH . I 6 HOH A 19 359 39 HOH HOH . I 6 HOH A 20 360 43 HOH HOH . I 6 HOH A 21 361 44 HOH HOH . I 6 HOH A 22 362 45 HOH HOH . I 6 HOH A 23 363 47 HOH HOH . I 6 HOH A 24 364 48 HOH HOH . I 6 HOH A 25 365 52 HOH HOH . I 6 HOH A 26 366 53 HOH HOH . I 6 HOH A 27 367 55 HOH HOH . I 6 HOH A 28 368 56 HOH HOH . I 6 HOH A 29 369 57 HOH HOH . I 6 HOH A 30 370 58 HOH HOH . I 6 HOH A 31 371 59 HOH HOH . I 6 HOH A 32 372 61 HOH HOH . I 6 HOH A 33 373 62 HOH HOH . I 6 HOH A 34 374 63 HOH HOH . I 6 HOH A 35 375 65 HOH HOH . I 6 HOH A 36 376 69 HOH HOH . I 6 HOH A 37 377 70 HOH HOH . I 6 HOH A 38 378 73 HOH HOH . I 6 HOH A 39 379 76 HOH HOH . I 6 HOH A 40 380 80 HOH HOH . I 6 HOH A 41 381 82 HOH HOH . I 6 HOH A 42 382 83 HOH HOH . I 6 HOH A 43 383 84 HOH HOH . I 6 HOH A 44 384 85 HOH HOH . I 6 HOH A 45 385 86 HOH HOH . I 6 HOH A 46 386 87 HOH HOH . I 6 HOH A 47 387 88 HOH HOH . I 6 HOH A 48 388 90 HOH HOH . I 6 HOH A 49 389 92 HOH HOH . I 6 HOH A 50 390 94 HOH HOH . I 6 HOH A 51 391 96 HOH HOH . I 6 HOH A 52 392 98 HOH HOH . I 6 HOH A 53 394 100 HOH HOH . I 6 HOH A 54 395 109 HOH HOH . I 6 HOH A 55 396 114 HOH HOH . I 6 HOH A 56 397 115 HOH HOH . I 6 HOH A 57 398 116 HOH HOH . I 6 HOH A 58 399 117 HOH HOH . I 6 HOH A 59 400 118 HOH HOH . I 6 HOH A 60 401 121 HOH HOH . I 6 HOH A 61 402 122 HOH HOH . I 6 HOH A 62 403 126 HOH HOH . I 6 HOH A 63 404 128 HOH HOH . I 6 HOH A 64 405 130 HOH HOH . I 6 HOH A 65 406 131 HOH HOH . I 6 HOH A 66 407 134 HOH HOH . I 6 HOH A 67 408 137 HOH HOH . J 6 HOH B 1 337 4 HOH HOH . J 6 HOH B 2 338 5 HOH HOH . J 6 HOH B 3 339 6 HOH HOH . J 6 HOH B 4 340 7 HOH HOH . J 6 HOH B 5 341 12 HOH HOH . J 6 HOH B 6 342 13 HOH HOH . J 6 HOH B 7 343 14 HOH HOH . J 6 HOH B 8 344 15 HOH HOH . J 6 HOH B 9 345 17 HOH HOH . J 6 HOH B 10 346 19 HOH HOH . J 6 HOH B 11 347 22 HOH HOH . J 6 HOH B 12 348 23 HOH HOH . J 6 HOH B 13 349 25 HOH HOH . J 6 HOH B 14 350 27 HOH HOH . J 6 HOH B 15 351 28 HOH HOH . J 6 HOH B 16 352 29 HOH HOH . J 6 HOH B 17 353 30 HOH HOH . J 6 HOH B 18 354 38 HOH HOH . J 6 HOH B 19 355 40 HOH HOH . J 6 HOH B 20 356 41 HOH HOH . J 6 HOH B 21 357 42 HOH HOH . J 6 HOH B 22 358 46 HOH HOH . J 6 HOH B 23 359 50 HOH HOH . J 6 HOH B 24 360 51 HOH HOH . J 6 HOH B 25 361 54 HOH HOH . J 6 HOH B 26 362 60 HOH HOH . J 6 HOH B 27 363 64 HOH HOH . J 6 HOH B 28 364 66 HOH HOH . J 6 HOH B 29 365 67 HOH HOH . J 6 HOH B 30 366 68 HOH HOH . J 6 HOH B 31 367 72 HOH HOH . J 6 HOH B 32 368 74 HOH HOH . J 6 HOH B 33 369 75 HOH HOH . J 6 HOH B 34 370 77 HOH HOH . J 6 HOH B 35 371 78 HOH HOH . J 6 HOH B 36 372 79 HOH HOH . J 6 HOH B 37 373 95 HOH HOH . J 6 HOH B 38 374 97 HOH HOH . J 6 HOH B 39 375 101 HOH HOH . J 6 HOH B 40 376 102 HOH HOH . J 6 HOH B 41 377 103 HOH HOH . J 6 HOH B 42 378 104 HOH HOH . J 6 HOH B 43 379 105 HOH HOH . J 6 HOH B 44 380 106 HOH HOH . J 6 HOH B 45 381 110 HOH HOH . J 6 HOH B 46 382 111 HOH HOH . J 6 HOH B 47 383 112 HOH HOH . J 6 HOH B 48 384 113 HOH HOH . J 6 HOH B 49 385 119 HOH HOH . J 6 HOH B 50 386 120 HOH HOH . J 6 HOH B 51 387 123 HOH HOH . J 6 HOH B 52 388 124 HOH HOH . J 6 HOH B 53 389 125 HOH HOH . J 6 HOH B 54 390 127 HOH HOH . J 6 HOH B 55 391 129 HOH HOH . J 6 HOH B 56 392 132 HOH HOH . J 6 HOH B 57 393 99 HOH HOH . J 6 HOH B 58 394 135 HOH HOH . J 6 HOH B 59 395 136 HOH HOH . J 6 HOH B 60 396 138 HOH HOH . J 6 HOH B 61 397 139 HOH HOH . J 6 HOH B 62 398 140 HOH HOH . J 6 HOH B 63 399 133 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 30.76 _atom_site.Cartn_y -42.995 _atom_site.Cartn_z -6.189 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 338 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #