data_3O4B # _model_server_result.job_id 1l9WgzQWsOreQK8SS3feCQ _model_server_result.datetime_utc '2024-10-13 12:16:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 3O4B # _exptl.entry_id 3O4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O4B _cell.length_a 50.55 _cell.length_b 53.52 _cell.length_c 84.95 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 266 n n C C2 TRS sing 267 n n C C3 TRS sing 268 n n C N TRS sing 269 n n C1 O1 TRS sing 270 n n C1 H11 TRS sing 271 n n C1 H12 TRS sing 272 n n C2 O2 TRS sing 273 n n C2 H21 TRS sing 274 n n C2 H22 TRS sing 275 n n C3 O3 TRS sing 276 n n C3 H31 TRS sing 277 n n C3 H32 TRS sing 278 n n N HN1 TRS sing 279 n n N HN2 TRS sing 280 n n N HN3 TRS sing 281 n n O1 HO1 TRS sing 282 n n O2 HO2 TRS sing 283 n n O3 HO3 TRS sing 284 n n # _atom_sites.entry_id 3O4B _atom_sites.fract_transf_matrix[1][1] 0.019782 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011772 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 200 200 TRS TRS . C 3 SO4 A 1 141 1 SO4 SO4 . D 3 SO4 A 1 142 2 SO4 SO4 . E 4 CL A 1 143 1 CL CL . F 5 HOH A 1 144 1 HOH HOH . F 5 HOH A 2 145 2 HOH HOH . F 5 HOH A 3 146 3 HOH HOH . F 5 HOH A 4 147 4 HOH HOH . F 5 HOH A 5 148 5 HOH HOH . F 5 HOH A 6 149 6 HOH HOH . F 5 HOH A 7 150 7 HOH HOH . F 5 HOH A 8 151 8 HOH HOH . F 5 HOH A 9 152 9 HOH HOH . F 5 HOH A 10 153 10 HOH HOH . F 5 HOH A 11 154 11 HOH HOH . F 5 HOH A 12 155 12 HOH HOH . F 5 HOH A 13 156 13 HOH HOH . F 5 HOH A 14 157 14 HOH HOH . F 5 HOH A 15 158 15 HOH HOH . F 5 HOH A 16 159 16 HOH HOH . F 5 HOH A 17 160 17 HOH HOH . F 5 HOH A 18 161 18 HOH HOH . F 5 HOH A 19 162 19 HOH HOH . F 5 HOH A 20 163 20 HOH HOH . F 5 HOH A 21 165 22 HOH HOH . F 5 HOH A 22 166 23 HOH HOH . F 5 HOH A 23 167 24 HOH HOH . F 5 HOH A 24 168 25 HOH HOH . F 5 HOH A 25 169 26 HOH HOH . F 5 HOH A 26 170 27 HOH HOH . F 5 HOH A 27 171 28 HOH HOH . F 5 HOH A 28 172 29 HOH HOH . F 5 HOH A 29 173 30 HOH HOH . F 5 HOH A 30 174 31 HOH HOH . F 5 HOH A 31 175 32 HOH HOH . F 5 HOH A 32 176 33 HOH HOH . F 5 HOH A 33 177 34 HOH HOH . F 5 HOH A 34 178 35 HOH HOH . F 5 HOH A 35 179 36 HOH HOH . F 5 HOH A 36 180 37 HOH HOH . F 5 HOH A 37 181 38 HOH HOH . F 5 HOH A 38 182 39 HOH HOH . F 5 HOH A 39 183 40 HOH HOH . F 5 HOH A 40 184 41 HOH HOH . F 5 HOH A 41 185 42 HOH HOH . F 5 HOH A 42 186 43 HOH HOH . F 5 HOH A 43 187 44 HOH HOH . F 5 HOH A 44 188 45 HOH HOH . F 5 HOH A 45 189 46 HOH HOH . F 5 HOH A 46 190 47 HOH HOH . F 5 HOH A 47 191 48 HOH HOH . F 5 HOH A 48 192 49 HOH HOH . F 5 HOH A 49 193 50 HOH HOH . F 5 HOH A 50 194 51 HOH HOH . F 5 HOH A 51 195 52 HOH HOH . F 5 HOH A 52 196 53 HOH HOH . F 5 HOH A 53 197 54 HOH HOH . F 5 HOH A 54 198 55 HOH HOH . F 5 HOH A 55 199 56 HOH HOH . F 5 HOH A 56 201 57 HOH HOH . F 5 HOH A 57 202 58 HOH HOH . F 5 HOH A 58 203 59 HOH HOH . F 5 HOH A 59 204 60 HOH HOH . F 5 HOH A 60 205 61 HOH HOH . F 5 HOH A 61 206 62 HOH HOH . F 5 HOH A 62 207 63 HOH HOH . F 5 HOH A 63 208 64 HOH HOH . F 5 HOH A 64 209 65 HOH HOH . F 5 HOH A 65 210 66 HOH HOH . F 5 HOH A 66 211 67 HOH HOH . F 5 HOH A 67 212 68 HOH HOH . F 5 HOH A 68 213 69 HOH HOH . F 5 HOH A 69 214 70 HOH HOH . F 5 HOH A 70 215 71 HOH HOH . F 5 HOH A 71 216 72 HOH HOH . F 5 HOH A 72 217 73 HOH HOH . F 5 HOH A 73 218 74 HOH HOH . F 5 HOH A 74 219 75 HOH HOH . F 5 HOH A 75 220 76 HOH HOH . F 5 HOH A 76 221 77 HOH HOH . F 5 HOH A 77 222 78 HOH HOH . F 5 HOH A 78 223 79 HOH HOH . F 5 HOH A 79 224 80 HOH HOH . F 5 HOH A 80 225 81 HOH HOH . F 5 HOH A 81 226 82 HOH HOH . F 5 HOH A 82 227 83 HOH HOH . F 5 HOH A 83 228 84 HOH HOH . F 5 HOH A 84 229 85 HOH HOH . F 5 HOH A 85 230 86 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 1.322 12.879 17.761 1 12.68 ? C TRS 200 A 1 HETATM 2 C C1 TRS . . . B 2 1.069 14.265 18.369 1 16.34 ? C1 TRS 200 A 1 HETATM 3 C C2 TRS . . . B 2 0.185 12.509 16.812 1 14.57 ? C2 TRS 200 A 1 HETATM 4 C C3 TRS . . . B 2 1.479 11.842 18.881 1 12.72 ? C3 TRS 200 A 1 HETATM 5 N N TRS . . . B 2 2.562 12.914 16.983 1 14.44 ? N TRS 200 A 1 HETATM 6 O O1 TRS . . . B 2 2.235 14.768 18.996 1 14.9 ? O1 TRS 200 A 1 HETATM 7 O O2 TRS . . . B 2 0.264 13.274 15.605 1 14.56 ? O2 TRS 200 A 1 HETATM 8 O O3 TRS . . . B 2 1.958 10.611 18.363 1 13.04 ? O3 TRS 200 A 1 # _model_server_stats.io_time_ms 106 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 8 #