data_3O4S # _model_server_result.job_id tanvdLt6reWd1Gl0eZQyGA _model_server_result.datetime_utc '2024-11-26 11:19:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o4s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":9}' # _entry.id 3O4S # _exptl.entry_id 3O4S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 124.29 _cell.angle_gamma 90 _cell.entry_id 3O4S _cell.length_a 117.795 _cell.length_b 39.13 _cell.length_c 83.441 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O4S _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3O4S _atom_sites.fract_transf_matrix[1][1] 0.008489 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005789 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025556 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014506 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 1 1 SO4 SO4 . C 2 SO4 A 1 2 2 SO4 SO4 . D 2 SO4 A 1 3 3 SO4 SO4 . E 2 SO4 A 1 4 4 SO4 SO4 . F 2 SO4 A 1 5 5 SO4 SO4 . G 2 SO4 A 1 6 6 SO4 SO4 . H 3 GOL A 1 7 7 GOL GOL . I 3 GOL A 1 8 8 GOL GOL . J 3 GOL A 1 9 9 GOL GOL . K 3 GOL A 1 10 10 GOL GOL . L 3 GOL A 1 11 11 GOL GOL . M 4 HOH A 1 400 400 HOH HOH . M 4 HOH A 2 401 401 HOH HOH . M 4 HOH A 3 402 402 HOH HOH . M 4 HOH A 4 403 403 HOH HOH . M 4 HOH A 5 404 404 HOH HOH . M 4 HOH A 6 405 405 HOH HOH . M 4 HOH A 7 406 406 HOH HOH . M 4 HOH A 8 407 407 HOH HOH . M 4 HOH A 9 408 408 HOH HOH . M 4 HOH A 10 409 409 HOH HOH . M 4 HOH A 11 410 410 HOH HOH . M 4 HOH A 12 411 411 HOH HOH . M 4 HOH A 13 412 412 HOH HOH . M 4 HOH A 14 413 413 HOH HOH . M 4 HOH A 15 414 414 HOH HOH . M 4 HOH A 16 415 415 HOH HOH . M 4 HOH A 17 416 416 HOH HOH . M 4 HOH A 18 417 417 HOH HOH . M 4 HOH A 19 418 418 HOH HOH . M 4 HOH A 20 419 419 HOH HOH . M 4 HOH A 21 420 420 HOH HOH . M 4 HOH A 22 421 421 HOH HOH . M 4 HOH A 23 422 422 HOH HOH . M 4 HOH A 24 423 423 HOH HOH . M 4 HOH A 25 424 424 HOH HOH . M 4 HOH A 26 425 425 HOH HOH . M 4 HOH A 27 426 426 HOH HOH . M 4 HOH A 28 427 427 HOH HOH . M 4 HOH A 29 428 428 HOH HOH . M 4 HOH A 30 429 429 HOH HOH . M 4 HOH A 31 430 430 HOH HOH . M 4 HOH A 32 431 431 HOH HOH . M 4 HOH A 33 432 432 HOH HOH . M 4 HOH A 34 433 433 HOH HOH . M 4 HOH A 35 434 434 HOH HOH . M 4 HOH A 36 435 435 HOH HOH . M 4 HOH A 37 436 436 HOH HOH . M 4 HOH A 38 437 437 HOH HOH . M 4 HOH A 39 438 438 HOH HOH . M 4 HOH A 40 439 439 HOH HOH . M 4 HOH A 41 440 440 HOH HOH . M 4 HOH A 42 441 441 HOH HOH . M 4 HOH A 43 442 442 HOH HOH . M 4 HOH A 44 443 443 HOH HOH . M 4 HOH A 45 444 444 HOH HOH . M 4 HOH A 46 445 445 HOH HOH . M 4 HOH A 47 446 446 HOH HOH . M 4 HOH A 48 447 447 HOH HOH . M 4 HOH A 49 448 448 HOH HOH . M 4 HOH A 50 449 449 HOH HOH . M 4 HOH A 51 450 450 HOH HOH . M 4 HOH A 52 451 451 HOH HOH . M 4 HOH A 53 452 452 HOH HOH . M 4 HOH A 54 453 453 HOH HOH . M 4 HOH A 55 454 454 HOH HOH . M 4 HOH A 56 455 455 HOH HOH . M 4 HOH A 57 456 456 HOH HOH . M 4 HOH A 58 457 457 HOH HOH . M 4 HOH A 59 458 458 HOH HOH . M 4 HOH A 60 459 459 HOH HOH . M 4 HOH A 61 460 460 HOH HOH . M 4 HOH A 62 461 461 HOH HOH . M 4 HOH A 63 462 462 HOH HOH . M 4 HOH A 64 463 463 HOH HOH . M 4 HOH A 65 464 464 HOH HOH . M 4 HOH A 66 465 465 HOH HOH . M 4 HOH A 67 466 466 HOH HOH . M 4 HOH A 68 467 467 HOH HOH . M 4 HOH A 69 468 468 HOH HOH . M 4 HOH A 70 469 469 HOH HOH . M 4 HOH A 71 470 470 HOH HOH . M 4 HOH A 72 471 471 HOH HOH . M 4 HOH A 73 472 472 HOH HOH . M 4 HOH A 74 473 473 HOH HOH . M 4 HOH A 75 474 474 HOH HOH . M 4 HOH A 76 475 475 HOH HOH . M 4 HOH A 77 476 476 HOH HOH . M 4 HOH A 78 477 477 HOH HOH . M 4 HOH A 79 478 478 HOH HOH . M 4 HOH A 80 479 479 HOH HOH . M 4 HOH A 81 480 480 HOH HOH . M 4 HOH A 82 481 481 HOH HOH . M 4 HOH A 83 482 482 HOH HOH . M 4 HOH A 84 483 483 HOH HOH . M 4 HOH A 85 484 484 HOH HOH . M 4 HOH A 86 485 485 HOH HOH . M 4 HOH A 87 486 486 HOH HOH . M 4 HOH A 88 487 487 HOH HOH . M 4 HOH A 89 488 488 HOH HOH . M 4 HOH A 90 489 489 HOH HOH . M 4 HOH A 91 490 490 HOH HOH . M 4 HOH A 92 491 491 HOH HOH . M 4 HOH A 93 492 492 HOH HOH . M 4 HOH A 94 493 493 HOH HOH . M 4 HOH A 95 494 494 HOH HOH . M 4 HOH A 96 495 495 HOH HOH . M 4 HOH A 97 496 496 HOH HOH . M 4 HOH A 98 497 497 HOH HOH . M 4 HOH A 99 498 498 HOH HOH . M 4 HOH A 100 499 499 HOH HOH . M 4 HOH A 101 500 500 HOH HOH . M 4 HOH A 102 501 501 HOH HOH . M 4 HOH A 103 502 502 HOH HOH . M 4 HOH A 104 503 503 HOH HOH . M 4 HOH A 105 504 504 HOH HOH . M 4 HOH A 106 505 505 HOH HOH . M 4 HOH A 107 506 506 HOH HOH . M 4 HOH A 108 507 507 HOH HOH . M 4 HOH A 109 508 508 HOH HOH . M 4 HOH A 110 509 509 HOH HOH . M 4 HOH A 111 510 510 HOH HOH . M 4 HOH A 112 511 511 HOH HOH . M 4 HOH A 113 512 512 HOH HOH . M 4 HOH A 114 513 513 HOH HOH . M 4 HOH A 115 514 514 HOH HOH . M 4 HOH A 116 515 515 HOH HOH . M 4 HOH A 117 516 516 HOH HOH . M 4 HOH A 118 517 517 HOH HOH . M 4 HOH A 119 518 518 HOH HOH . M 4 HOH A 120 519 519 HOH HOH . M 4 HOH A 121 520 520 HOH HOH . M 4 HOH A 122 521 521 HOH HOH . M 4 HOH A 123 522 522 HOH HOH . M 4 HOH A 124 523 523 HOH HOH . M 4 HOH A 125 524 524 HOH HOH . M 4 HOH A 126 525 525 HOH HOH . M 4 HOH A 127 526 526 HOH HOH . M 4 HOH A 128 527 527 HOH HOH . M 4 HOH A 129 528 528 HOH HOH . M 4 HOH A 130 529 529 HOH HOH . M 4 HOH A 131 530 530 HOH HOH . M 4 HOH A 132 531 531 HOH HOH . M 4 HOH A 133 532 532 HOH HOH . M 4 HOH A 134 533 533 HOH HOH . M 4 HOH A 135 534 534 HOH HOH . M 4 HOH A 136 535 535 HOH HOH . M 4 HOH A 137 536 536 HOH HOH . M 4 HOH A 138 537 537 HOH HOH . M 4 HOH A 139 538 538 HOH HOH . M 4 HOH A 140 539 539 HOH HOH . M 4 HOH A 141 540 540 HOH HOH . M 4 HOH A 142 541 541 HOH HOH . M 4 HOH A 143 542 542 HOH HOH . M 4 HOH A 144 543 543 HOH HOH . M 4 HOH A 145 544 544 HOH HOH . M 4 HOH A 146 545 545 HOH HOH . M 4 HOH A 147 546 546 HOH HOH . M 4 HOH A 148 547 547 HOH HOH . M 4 HOH A 149 548 548 HOH HOH . M 4 HOH A 150 549 549 HOH HOH . M 4 HOH A 151 550 550 HOH HOH . M 4 HOH A 152 551 551 HOH HOH . M 4 HOH A 153 552 552 HOH HOH . M 4 HOH A 154 553 553 HOH HOH . M 4 HOH A 155 554 554 HOH HOH . M 4 HOH A 156 555 555 HOH HOH . M 4 HOH A 157 556 556 HOH HOH . M 4 HOH A 158 557 557 HOH HOH . M 4 HOH A 159 558 558 HOH HOH . M 4 HOH A 160 559 559 HOH HOH . M 4 HOH A 161 560 560 HOH HOH . M 4 HOH A 162 561 561 HOH HOH . M 4 HOH A 163 562 562 HOH HOH . M 4 HOH A 164 563 563 HOH HOH . M 4 HOH A 165 564 564 HOH HOH . M 4 HOH A 166 565 565 HOH HOH . M 4 HOH A 167 566 566 HOH HOH . M 4 HOH A 168 567 567 HOH HOH . M 4 HOH A 169 568 568 HOH HOH . M 4 HOH A 170 569 569 HOH HOH . M 4 HOH A 171 570 570 HOH HOH . M 4 HOH A 172 571 571 HOH HOH . M 4 HOH A 173 572 572 HOH HOH . M 4 HOH A 174 573 573 HOH HOH . M 4 HOH A 175 574 574 HOH HOH . M 4 HOH A 176 575 575 HOH HOH . M 4 HOH A 177 576 576 HOH HOH . M 4 HOH A 178 577 577 HOH HOH . M 4 HOH A 179 578 578 HOH HOH . M 4 HOH A 180 579 579 HOH HOH . M 4 HOH A 181 580 580 HOH HOH . M 4 HOH A 182 581 581 HOH HOH . M 4 HOH A 183 582 582 HOH HOH . M 4 HOH A 184 583 583 HOH HOH . M 4 HOH A 185 584 584 HOH HOH . M 4 HOH A 186 585 585 HOH HOH . M 4 HOH A 187 586 586 HOH HOH . M 4 HOH A 188 587 587 HOH HOH . M 4 HOH A 189 588 588 HOH HOH . M 4 HOH A 190 589 589 HOH HOH . M 4 HOH A 191 590 590 HOH HOH . M 4 HOH A 192 591 591 HOH HOH . M 4 HOH A 193 592 592 HOH HOH . M 4 HOH A 194 593 593 HOH HOH . M 4 HOH A 195 594 594 HOH HOH . M 4 HOH A 196 595 595 HOH HOH . M 4 HOH A 197 596 596 HOH HOH . M 4 HOH A 198 597 597 HOH HOH . M 4 HOH A 199 598 598 HOH HOH . M 4 HOH A 200 599 599 HOH HOH . M 4 HOH A 201 600 600 HOH HOH . M 4 HOH A 202 601 601 HOH HOH . M 4 HOH A 203 602 602 HOH HOH . M 4 HOH A 204 603 603 HOH HOH . M 4 HOH A 205 604 604 HOH HOH . M 4 HOH A 206 605 605 HOH HOH . M 4 HOH A 207 606 606 HOH HOH . M 4 HOH A 208 607 607 HOH HOH . M 4 HOH A 209 608 608 HOH HOH . M 4 HOH A 210 609 609 HOH HOH . M 4 HOH A 211 610 610 HOH HOH . M 4 HOH A 212 611 611 HOH HOH . M 4 HOH A 213 612 612 HOH HOH . M 4 HOH A 214 613 613 HOH HOH . M 4 HOH A 215 614 614 HOH HOH . M 4 HOH A 216 615 615 HOH HOH . M 4 HOH A 217 616 616 HOH HOH . M 4 HOH A 218 617 617 HOH HOH . M 4 HOH A 219 618 618 HOH HOH . M 4 HOH A 220 619 619 HOH HOH . M 4 HOH A 221 620 620 HOH HOH . M 4 HOH A 222 621 621 HOH HOH . M 4 HOH A 223 622 622 HOH HOH . M 4 HOH A 224 623 623 HOH HOH . M 4 HOH A 225 624 624 HOH HOH . M 4 HOH A 226 625 625 HOH HOH . M 4 HOH A 227 626 626 HOH HOH . M 4 HOH A 228 627 627 HOH HOH . M 4 HOH A 229 628 628 HOH HOH . M 4 HOH A 230 629 629 HOH HOH . M 4 HOH A 231 630 630 HOH HOH . M 4 HOH A 232 631 631 HOH HOH . M 4 HOH A 233 632 632 HOH HOH . M 4 HOH A 234 633 633 HOH HOH . M 4 HOH A 235 634 634 HOH HOH . M 4 HOH A 236 635 635 HOH HOH . M 4 HOH A 237 636 636 HOH HOH . M 4 HOH A 238 637 637 HOH HOH . M 4 HOH A 239 638 638 HOH HOH . M 4 HOH A 240 639 639 HOH HOH . M 4 HOH A 241 640 640 HOH HOH . M 4 HOH A 242 641 641 HOH HOH . M 4 HOH A 243 642 642 HOH HOH . M 4 HOH A 244 643 643 HOH HOH . M 4 HOH A 245 644 644 HOH HOH . M 4 HOH A 246 645 645 HOH HOH . M 4 HOH A 247 646 646 HOH HOH . M 4 HOH A 248 647 647 HOH HOH . M 4 HOH A 249 648 648 HOH HOH . M 4 HOH A 250 649 649 HOH HOH . M 4 HOH A 251 650 650 HOH HOH . M 4 HOH A 252 651 651 HOH HOH . M 4 HOH A 253 652 652 HOH HOH . M 4 HOH A 254 653 653 HOH HOH . M 4 HOH A 255 654 654 HOH HOH . M 4 HOH A 256 655 655 HOH HOH . M 4 HOH A 257 656 656 HOH HOH . M 4 HOH A 258 657 657 HOH HOH . M 4 HOH A 259 658 658 HOH HOH . M 4 HOH A 260 659 659 HOH HOH . M 4 HOH A 261 660 660 HOH HOH . M 4 HOH A 262 661 661 HOH HOH . M 4 HOH A 263 662 662 HOH HOH . M 4 HOH A 264 663 663 HOH HOH . M 4 HOH A 265 664 664 HOH HOH . M 4 HOH A 266 665 665 HOH HOH . M 4 HOH A 267 666 666 HOH HOH . M 4 HOH A 268 667 667 HOH HOH . M 4 HOH A 269 668 668 HOH HOH . M 4 HOH A 270 669 669 HOH HOH . M 4 HOH A 271 670 670 HOH HOH . M 4 HOH A 272 671 671 HOH HOH . M 4 HOH A 273 672 672 HOH HOH . M 4 HOH A 274 673 673 HOH HOH . M 4 HOH A 275 674 674 HOH HOH . M 4 HOH A 276 675 675 HOH HOH . M 4 HOH A 277 676 676 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . J 3 6.785 20.159 -31.385 1 41.46 ? C1 GOL 9 A 1 HETATM 2 O O1 GOL . . . J 3 5.708 19.265 -31.548 1 39.65 ? O1 GOL 9 A 1 HETATM 3 C C2 GOL . . . J 3 7.516 20.296 -32.709 1 39.9 ? C2 GOL 9 A 1 HETATM 4 O O2 GOL . . . J 3 8.445 19.251 -32.834 1 42.79 ? O2 GOL 9 A 1 HETATM 5 C C3 GOL . . . J 3 8.227 21.638 -32.802 1 35.81 ? C3 GOL 9 A 1 HETATM 6 O O3 GOL . . . J 3 7.36 22.705 -32.463 1 36.14 ? O3 GOL 9 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 6 #