data_3O5S
#
_model_server_result.job_id            Fnd7nfJXnWymiUWlLg3Ykg 
_model_server_result.datetime_utc      '2025-04-03 04:45:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3o5s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":244}' 
#
_entry.id    3O5S 
#
_exptl.entry_id    3O5S 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              282.334 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3O5S 
_cell.length_a            103.758 
_cell.length_b            103.758 
_cell.length_c            102.097 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3O5S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O PRO 33 A PRO 37 1_555 B CA CA . A CA 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.561 ? 
metalc ? metalc2 A O GLY 69 A GLY 73 1_555 B CA CA . A CA 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.387 ? 
metalc ? metalc3 A OD1 ASP 231 A ASP 235 1_555 B CA CA . A CA 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? 
metalc ? metalc4 A O ASP 231 A ASP 235 1_555 B CA CA . A CA 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc5 B CA CA . A CA 243 1_555 D O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.568 ? 
metalc ? metalc6 B CA CA . A CA 243 1_555 D O HOH . A HOH 419 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.279 ? 
#
_chem_comp.formula           'C11 H26 N2 O6' 
_chem_comp.formula_weight    282.334 
_chem_comp.id                B3P 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 B3P sing 70 n n 
C1 C3 B3P sing 71 n n 
C1 H11 B3P sing 72 n n 
C1 H12 B3P sing 73 n n 
C2 N2 B3P sing 74 n n 
C2 H21 B3P sing 75 n n 
C2 H22 B3P sing 76 n n 
C3 N1 B3P sing 77 n n 
C3 H31 B3P sing 78 n n 
C3 H32 B3P sing 79 n n 
N1 C4 B3P sing 80 n n 
N1 HN1 B3P sing 81 n n 
C4 C5 B3P sing 82 n n 
C4 C6 B3P sing 83 n n 
C4 C7 B3P sing 84 n n 
C5 O4 B3P sing 85 n n 
C5 H51 B3P sing 86 n n 
C5 H52 B3P sing 87 n n 
C6 O5 B3P sing 88 n n 
C6 H61 B3P sing 89 n n 
C6 H62 B3P sing 90 n n 
C7 O6 B3P sing 91 n n 
C7 H71 B3P sing 92 n n 
C7 H72 B3P sing 93 n n 
N2 C8 B3P sing 94 n n 
N2 HN2 B3P sing 95 n n 
C8 C9 B3P sing 96 n n 
C8 C10 B3P sing 97 n n 
C8 C11 B3P sing 98 n n 
C9 O1 B3P sing 99 n n 
C9 H91 B3P sing 100 n n 
C9 H92 B3P sing 101 n n 
C10 O2 B3P sing 102 n n 
C10 H101 B3P sing 103 n n 
C10 H102 B3P sing 104 n n 
C11 O3 B3P sing 105 n n 
C11 H111 B3P sing 106 n n 
C11 H112 B3P sing 107 n n 
O1 HO1 B3P sing 108 n n 
O2 HO2 B3P sing 109 n n 
O3 HO3 B3P sing 110 n n 
O4 HO4 B3P sing 111 n n 
O5 HO5 B3P sing 112 n n 
O6 HO6 B3P sing 113 n n 
#
_atom_sites.entry_id                     3O5S 
_atom_sites.fract_transf_matrix[1][1]    0.009638 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009638 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009795 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 CA A 1 243 243 CA CA . 
C 3 B3P A 1 244 244 B3P B3P . 
D 4 HOH A 1 300 300 HOH HOH . 
D 4 HOH A 2 301 301 HOH HOH . 
D 4 HOH A 3 302 302 HOH HOH . 
D 4 HOH A 4 303 303 HOH HOH . 
D 4 HOH A 5 304 304 HOH HOH . 
D 4 HOH A 6 305 305 HOH HOH . 
D 4 HOH A 7 306 306 HOH HOH . 
D 4 HOH A 8 307 307 HOH HOH . 
D 4 HOH A 9 308 308 HOH HOH . 
D 4 HOH A 10 309 309 HOH HOH . 
D 4 HOH A 11 310 310 HOH HOH . 
D 4 HOH A 12 311 311 HOH HOH . 
D 4 HOH A 13 312 312 HOH HOH . 
D 4 HOH A 14 313 313 HOH HOH . 
D 4 HOH A 15 314 314 HOH HOH . 
D 4 HOH A 16 315 315 HOH HOH . 
D 4 HOH A 17 316 316 HOH HOH . 
D 4 HOH A 18 317 317 HOH HOH . 
D 4 HOH A 19 318 318 HOH HOH . 
D 4 HOH A 20 319 319 HOH HOH . 
D 4 HOH A 21 320 320 HOH HOH . 
D 4 HOH A 22 321 321 HOH HOH . 
D 4 HOH A 23 322 322 HOH HOH . 
D 4 HOH A 24 323 323 HOH HOH . 
D 4 HOH A 25 324 324 HOH HOH . 
D 4 HOH A 26 325 325 HOH HOH . 
D 4 HOH A 27 326 326 HOH HOH . 
D 4 HOH A 28 327 327 HOH HOH . 
D 4 HOH A 29 328 328 HOH HOH . 
D 4 HOH A 30 329 329 HOH HOH . 
D 4 HOH A 31 330 330 HOH HOH . 
D 4 HOH A 32 331 331 HOH HOH . 
D 4 HOH A 33 332 332 HOH HOH . 
D 4 HOH A 34 333 333 HOH HOH . 
D 4 HOH A 35 334 334 HOH HOH . 
D 4 HOH A 36 335 335 HOH HOH . 
D 4 HOH A 37 336 336 HOH HOH . 
D 4 HOH A 38 337 337 HOH HOH . 
D 4 HOH A 39 338 338 HOH HOH . 
D 4 HOH A 40 339 339 HOH HOH . 
D 4 HOH A 41 340 340 HOH HOH . 
D 4 HOH A 42 341 341 HOH HOH . 
D 4 HOH A 43 342 342 HOH HOH . 
D 4 HOH A 44 343 343 HOH HOH . 
D 4 HOH A 45 344 344 HOH HOH . 
D 4 HOH A 46 345 345 HOH HOH . 
D 4 HOH A 47 346 346 HOH HOH . 
D 4 HOH A 48 347 347 HOH HOH . 
D 4 HOH A 49 348 348 HOH HOH . 
D 4 HOH A 50 349 349 HOH HOH . 
D 4 HOH A 51 350 350 HOH HOH . 
D 4 HOH A 52 351 351 HOH HOH . 
D 4 HOH A 53 352 352 HOH HOH . 
D 4 HOH A 54 353 353 HOH HOH . 
D 4 HOH A 55 354 354 HOH HOH . 
D 4 HOH A 56 355 355 HOH HOH . 
D 4 HOH A 57 356 356 HOH HOH . 
D 4 HOH A 58 357 357 HOH HOH . 
D 4 HOH A 59 358 358 HOH HOH . 
D 4 HOH A 60 359 359 HOH HOH . 
D 4 HOH A 61 360 360 HOH HOH . 
D 4 HOH A 62 361 361 HOH HOH . 
D 4 HOH A 63 362 362 HOH HOH . 
D 4 HOH A 64 363 363 HOH HOH . 
D 4 HOH A 65 364 364 HOH HOH . 
D 4 HOH A 66 365 365 HOH HOH . 
D 4 HOH A 67 366 366 HOH HOH . 
D 4 HOH A 68 367 367 HOH HOH . 
D 4 HOH A 69 368 368 HOH HOH . 
D 4 HOH A 70 369 369 HOH HOH . 
D 4 HOH A 71 370 370 HOH HOH . 
D 4 HOH A 72 371 371 HOH HOH . 
D 4 HOH A 73 372 372 HOH HOH . 
D 4 HOH A 74 373 373 HOH HOH . 
D 4 HOH A 75 374 374 HOH HOH . 
D 4 HOH A 76 375 375 HOH HOH . 
D 4 HOH A 77 376 376 HOH HOH . 
D 4 HOH A 78 377 377 HOH HOH . 
D 4 HOH A 79 378 378 HOH HOH . 
D 4 HOH A 80 379 379 HOH HOH . 
D 4 HOH A 81 380 380 HOH HOH . 
D 4 HOH A 82 381 381 HOH HOH . 
D 4 HOH A 83 382 382 HOH HOH . 
D 4 HOH A 84 383 383 HOH HOH . 
D 4 HOH A 85 384 384 HOH HOH . 
D 4 HOH A 86 385 385 HOH HOH . 
D 4 HOH A 87 386 386 HOH HOH . 
D 4 HOH A 88 387 387 HOH HOH . 
D 4 HOH A 89 388 388 HOH HOH . 
D 4 HOH A 90 389 389 HOH HOH . 
D 4 HOH A 91 390 390 HOH HOH . 
D 4 HOH A 92 391 391 HOH HOH . 
D 4 HOH A 93 392 392 HOH HOH . 
D 4 HOH A 94 393 393 HOH HOH . 
D 4 HOH A 95 394 394 HOH HOH . 
D 4 HOH A 96 395 395 HOH HOH . 
D 4 HOH A 97 396 396 HOH HOH . 
D 4 HOH A 98 397 397 HOH HOH . 
D 4 HOH A 99 398 398 HOH HOH . 
D 4 HOH A 100 399 399 HOH HOH . 
D 4 HOH A 101 400 400 HOH HOH . 
D 4 HOH A 102 401 401 HOH HOH . 
D 4 HOH A 103 402 402 HOH HOH . 
D 4 HOH A 104 403 403 HOH HOH . 
D 4 HOH A 105 404 404 HOH HOH . 
D 4 HOH A 106 405 405 HOH HOH . 
D 4 HOH A 107 406 406 HOH HOH . 
D 4 HOH A 108 407 407 HOH HOH . 
D 4 HOH A 109 408 408 HOH HOH . 
D 4 HOH A 110 409 409 HOH HOH . 
D 4 HOH A 111 410 410 HOH HOH . 
D 4 HOH A 112 411 411 HOH HOH . 
D 4 HOH A 113 412 412 HOH HOH . 
D 4 HOH A 114 413 413 HOH HOH . 
D 4 HOH A 115 414 414 HOH HOH . 
D 4 HOH A 116 415 415 HOH HOH . 
D 4 HOH A 117 416 416 HOH HOH . 
D 4 HOH A 118 417 417 HOH HOH . 
D 4 HOH A 119 418 418 HOH HOH . 
D 4 HOH A 120 419 419 HOH HOH . 
D 4 HOH A 121 420 420 HOH HOH . 
D 4 HOH A 122 421 421 HOH HOH . 
D 4 HOH A 123 422 422 HOH HOH . 
D 4 HOH A 124 423 423 HOH HOH . 
D 4 HOH A 125 424 424 HOH HOH . 
D 4 HOH A 126 425 425 HOH HOH . 
D 4 HOH A 127 426 426 HOH HOH . 
D 4 HOH A 128 427 427 HOH HOH . 
D 4 HOH A 129 428 428 HOH HOH . 
D 4 HOH A 130 429 429 HOH HOH . 
D 4 HOH A 131 430 430 HOH HOH . 
D 4 HOH A 132 431 431 HOH HOH . 
D 4 HOH A 133 432 432 HOH HOH . 
D 4 HOH A 134 433 433 HOH HOH . 
D 4 HOH A 135 434 434 HOH HOH . 
D 4 HOH A 136 435 435 HOH HOH . 
D 4 HOH A 137 436 436 HOH HOH . 
D 4 HOH A 138 437 437 HOH HOH . 
D 4 HOH A 139 438 438 HOH HOH . 
D 4 HOH A 140 439 439 HOH HOH . 
D 4 HOH A 141 440 440 HOH HOH . 
D 4 HOH A 142 441 441 HOH HOH . 
D 4 HOH A 143 442 442 HOH HOH . 
D 4 HOH A 144 443 443 HOH HOH . 
D 4 HOH A 145 444 444 HOH HOH . 
D 4 HOH A 146 445 445 HOH HOH . 
D 4 HOH A 147 446 446 HOH HOH . 
D 4 HOH A 148 447 447 HOH HOH . 
D 4 HOH A 149 448 448 HOH HOH . 
D 4 HOH A 150 449 449 HOH HOH . 
D 4 HOH A 151 450 450 HOH HOH . 
D 4 HOH A 152 451 451 HOH HOH . 
D 4 HOH A 153 452 452 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 B3P . . . C 3 -28.663 0.116 26.474 1 46 ? C1 B3P 244 A 1 
HETATM 2 C C2 B3P . . . C 3 -30.172 0.306 26.423 1 45.16 ? C2 B3P 244 A 1 
HETATM 3 C C3 B3P . . . C 3 -28.26 -0.101 27.931 1 52.17 ? C3 B3P 244 A 1 
HETATM 4 N N1 B3P . . . C 3 -26.893 -0.58 28.073 1 56.1 ? N1 B3P 244 A 1 
HETATM 5 C C4 B3P . . . C 3 -26.074 -0.334 29.263 1 61.15 ? C4 B3P 244 A 1 
HETATM 6 C C5 B3P . . . C 3 -24.852 -1.252 29.283 1 60.95 ? C5 B3P 244 A 1 
HETATM 7 C C6 B3P . . . C 3 -26.864 -0.608 30.548 1 62.95 ? C6 B3P 244 A 1 
HETATM 8 C C7 B3P . . . C 3 -25.557 1.111 29.205 1 59.13 ? C7 B3P 244 A 1 
HETATM 9 N N2 B3P . . . C 3 -30.671 0.362 25.059 1 49.46 ? N2 B3P 244 A 1 
HETATM 10 C C8 B3P . . . C 3 -32.055 0.63 24.611 1 51.71 ? C8 B3P 244 A 1 
HETATM 11 C C9 B3P . . . C 3 -32.919 -0.635 24.77 1 50.32 ? C9 B3P 244 A 1 
HETATM 12 C C10 B3P . . . C 3 -32.122 1.16 23.16 1 48.88 ? C10 B3P 244 A 1 
HETATM 13 C C11 B3P . . . C 3 -32.62 1.791 25.41 1 52.14 ? C11 B3P 244 A 1 
HETATM 14 O O1 B3P . . . C 3 -32.084 -1.791 24.897 1 56.57 ? O1 B3P 244 A 1 
HETATM 15 O O2 B3P . . . C 3 -33.487 1.587 22.842 1 49.47 ? O2 B3P 244 A 1 
HETATM 16 O O3 B3P . . . C 3 -31.774 2.919 25.163 1 53.04 ? O3 B3P 244 A 1 
HETATM 17 O O4 B3P . . . C 3 -24.495 -1.53 27.932 1 64.7 ? O4 B3P 244 A 1 
HETATM 18 O O5 B3P . . . C 3 -27.719 -1.77 30.351 1 66.05 ? O5 B3P 244 A 1 
HETATM 19 O O6 B3P . . . C 3 -25.456 1.557 27.852 1 53.5 ? O6 B3P 244 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    12 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           19 
#