data_3O6H # _model_server_result.job_id OaJvIpIk8Xr9jZIELeiOdg _model_server_result.datetime_utc '2024-11-24 23:34:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":268}' # _entry.id 3O6H # _exptl.entry_id 3O6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 429.46 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[({4-[(ethylamino)methyl]-3-(trifluoromethyl)-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O6H _cell.length_a 63.89 _cell.length_b 87.45 _cell.length_c 47.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 206 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 206 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 261 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 261 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.01 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C18 H22 F3 N5 O2 S' _chem_comp.formula_weight 429.46 _chem_comp.id O25 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[({4-[(ethylamino)methyl]-3-(trifluoromethyl)-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C1 O25 doub 255 n y C2 C1 O25 sing 256 n n C1 C47 O25 sing 257 n y C2 N5 O25 sing 258 n n C2 H2 O25 sing 259 n n C2 H2A O25 sing 260 n n N5 C10 O25 sing 261 n n N5 HN5 O25 sing 262 n n C10 C13 O25 sing 263 n n C10 H10 O25 sing 264 n n C10 H10A O25 sing 265 n n C13 H13 O25 sing 266 n n C13 H13A O25 sing 267 n n C13 H13B O25 sing 268 n n C14 N16 O25 sing 269 n y C14 H14 O25 sing 270 n n C17 N16 O25 sing 271 n n N16 N46 O25 sing 272 n y C17 C20 O25 sing 273 n n C17 H17 O25 sing 274 n n C17 H17A O25 sing 275 n n N21 C20 O25 sing 276 n n C20 O45 O25 doub 277 n n N21 C23 O25 sing 278 n n N21 HN21 O25 sing 279 n n C23 C24 O25 doub 280 n y C23 S44 O25 sing 281 n y C25 C24 O25 sing 282 n n C24 C30 O25 sing 283 n y O29 C25 O25 doub 284 n n C25 N26 O25 sing 285 n n N26 HN26 O25 sing 286 n n N26 HN2A O25 sing 287 n n C30 C31 O25 sing 288 n n C30 C43 O25 doub 289 n y C31 C34 O25 sing 290 n n C31 H31 O25 sing 291 n n C31 H31A O25 sing 292 n n C34 C37 O25 sing 293 n n C34 H34 O25 sing 294 n n C34 H34A O25 sing 295 n n C40 C37 O25 sing 296 n n C37 H37 O25 sing 297 n n C37 H37A O25 sing 298 n n C43 C40 O25 sing 299 n n C40 H40 O25 sing 300 n n C40 H40A O25 sing 301 n n S44 C43 O25 sing 302 n y N46 C47 O25 doub 303 n y C47 C48 O25 sing 304 n n F49 C48 O25 sing 305 n n C48 F50 O25 sing 306 n n C48 F51 O25 sing 307 n n # _atom_sites.entry_id 3O6H _atom_sites.fract_transf_matrix[1][1] 0.015652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLU A 1 264 1 GLU GLU . C 3 SO4 A 1 265 1 SO4 SO4 . D 3 SO4 A 1 266 2 SO4 SO4 . E 3 SO4 A 1 267 3 SO4 SO4 . F 4 O25 A 1 268 1 O25 O25 . G 5 DMS A 1 269 1 DMS DMS . H 6 EDO A 1 270 1 EDO EDO . I 6 EDO A 1 271 1 EDO EDO . J 7 HOH A 1 272 1 HOH HOH . J 7 HOH A 2 273 2 HOH HOH . J 7 HOH A 3 274 3 HOH HOH . J 7 HOH A 4 275 4 HOH HOH . J 7 HOH A 5 276 5 HOH HOH . J 7 HOH A 6 277 6 HOH HOH . J 7 HOH A 7 278 7 HOH HOH . J 7 HOH A 8 279 8 HOH HOH . J 7 HOH A 9 280 9 HOH HOH . J 7 HOH A 10 281 10 HOH HOH . J 7 HOH A 11 282 11 HOH HOH . J 7 HOH A 12 283 12 HOH HOH . J 7 HOH A 13 284 13 HOH HOH . J 7 HOH A 14 285 14 HOH HOH . J 7 HOH A 15 286 15 HOH HOH . J 7 HOH A 16 287 16 HOH HOH . J 7 HOH A 17 288 17 HOH HOH . J 7 HOH A 18 289 18 HOH HOH . J 7 HOH A 19 290 19 HOH HOH . J 7 HOH A 20 291 20 HOH HOH . J 7 HOH A 21 292 21 HOH HOH . J 7 HOH A 22 293 22 HOH HOH . J 7 HOH A 23 294 23 HOH HOH . J 7 HOH A 24 295 24 HOH HOH . J 7 HOH A 25 296 25 HOH HOH . J 7 HOH A 26 297 26 HOH HOH . J 7 HOH A 27 298 27 HOH HOH . J 7 HOH A 28 299 28 HOH HOH . J 7 HOH A 29 300 29 HOH HOH . J 7 HOH A 30 301 30 HOH HOH . J 7 HOH A 31 302 31 HOH HOH . J 7 HOH A 32 303 32 HOH HOH . J 7 HOH A 33 304 33 HOH HOH . J 7 HOH A 34 305 34 HOH HOH . J 7 HOH A 35 306 35 HOH HOH . J 7 HOH A 36 307 36 HOH HOH . J 7 HOH A 37 308 37 HOH HOH . J 7 HOH A 38 309 38 HOH HOH . J 7 HOH A 39 310 39 HOH HOH . J 7 HOH A 40 311 40 HOH HOH . J 7 HOH A 41 312 41 HOH HOH . J 7 HOH A 42 313 42 HOH HOH . J 7 HOH A 43 314 43 HOH HOH . J 7 HOH A 44 315 44 HOH HOH . J 7 HOH A 45 316 45 HOH HOH . J 7 HOH A 46 317 46 HOH HOH . J 7 HOH A 47 318 47 HOH HOH . J 7 HOH A 48 319 48 HOH HOH . J 7 HOH A 49 320 49 HOH HOH . J 7 HOH A 50 321 50 HOH HOH . J 7 HOH A 51 322 51 HOH HOH . J 7 HOH A 52 323 52 HOH HOH . J 7 HOH A 53 324 53 HOH HOH . J 7 HOH A 54 325 54 HOH HOH . J 7 HOH A 55 326 55 HOH HOH . J 7 HOH A 56 327 56 HOH HOH . J 7 HOH A 57 328 57 HOH HOH . J 7 HOH A 58 329 58 HOH HOH . J 7 HOH A 59 330 59 HOH HOH . J 7 HOH A 60 331 60 HOH HOH . J 7 HOH A 61 332 61 HOH HOH . J 7 HOH A 62 333 62 HOH HOH . J 7 HOH A 63 334 63 HOH HOH . J 7 HOH A 64 335 64 HOH HOH . J 7 HOH A 65 336 65 HOH HOH . J 7 HOH A 66 337 66 HOH HOH . J 7 HOH A 67 338 67 HOH HOH . J 7 HOH A 68 339 68 HOH HOH . J 7 HOH A 69 340 69 HOH HOH . J 7 HOH A 70 341 70 HOH HOH . J 7 HOH A 71 342 71 HOH HOH . J 7 HOH A 72 343 72 HOH HOH . J 7 HOH A 73 344 73 HOH HOH . J 7 HOH A 74 345 74 HOH HOH . J 7 HOH A 75 346 75 HOH HOH . J 7 HOH A 76 347 76 HOH HOH . J 7 HOH A 77 348 77 HOH HOH . J 7 HOH A 78 349 78 HOH HOH . J 7 HOH A 79 350 79 HOH HOH . J 7 HOH A 80 351 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 O25 . . . F 4 1.997 -3.103 16.537 0.5 33.23 ? C1 O25 268 A 1 HETATM 2 C C2 O25 . . . F 4 1.98 -4.583 16.395 0.5 33.93 ? C2 O25 268 A 1 HETATM 3 N N5 O25 . . . F 4 3.025 -5.136 17.233 0.5 35.11 ? N5 O25 268 A 1 HETATM 4 C C10 O25 . . . F 4 2.625 -6.266 18.066 0.5 35.56 ? C10 O25 268 A 1 HETATM 5 C C13 O25 . . . F 4 3.516 -6.345 19.294 0.5 36.71 ? C13 O25 268 A 1 HETATM 6 C C14 O25 . . . F 4 1.465 -2.22 15.634 0.5 33.02 ? C14 O25 268 A 1 HETATM 7 N N16 O25 . . . F 4 1.687 -0.981 16.128 0.5 31.97 ? N16 O25 268 A 1 HETATM 8 C C17 O25 . . . F 4 1.302 0.278 15.55 0.5 31.12 ? C17 O25 268 A 1 HETATM 9 C C20 O25 . . . F 4 -0.194 0.363 15.603 0.5 29.43 ? C20 O25 268 A 1 HETATM 10 N N21 O25 . . . F 4 -0.653 1.633 15.344 0.5 30.33 ? N21 O25 268 A 1 HETATM 11 C C23 O25 . . . F 4 -1.373 2.425 16.205 0.5 29.4 ? C23 O25 268 A 1 HETATM 12 C C24 O25 . . . F 4 -1.531 3.791 16.339 0.5 29.89 ? C24 O25 268 A 1 HETATM 13 C C25 O25 . . . F 4 -0.818 4.701 15.457 0.5 30.12 ? C25 O25 268 A 1 HETATM 14 N N26 O25 . . . F 4 -1.089 6.033 15.56 0.5 29.6 ? N26 O25 268 A 1 HETATM 15 O O29 O25 . . . F 4 0.016 4.265 14.672 0.5 30.64 ? O29 O25 268 A 1 HETATM 16 C C30 O25 . . . F 4 -2.433 4.083 17.446 0.5 28.69 ? C30 O25 268 A 1 HETATM 17 C C31 O25 . . . F 4 -2.875 5.427 17.961 0.5 29.37 ? C31 O25 268 A 1 HETATM 18 C C34 O25 . . . F 4 -3.996 5.313 19.006 0.5 29.14 ? C34 O25 268 A 1 HETATM 19 C C37 O25 . . . F 4 -3.88 4.121 19.954 0.5 29.3 ? C37 O25 268 A 1 HETATM 20 C C40 O25 . . . F 4 -3.822 2.79 19.192 0.5 28.72 ? C40 O25 268 A 1 HETATM 21 C C43 O25 . . . F 4 -2.885 2.914 18.038 0.5 28.97 ? C43 O25 268 A 1 HETATM 22 S S44 O25 . . . F 4 -2.262 1.52 17.326 0.5 28.51 ? S44 O25 268 A 1 HETATM 23 O O45 O25 . . . F 4 -0.868 -0.63 15.855 0.5 28.35 ? O45 O25 268 A 1 HETATM 24 N N46 O25 . . . F 4 2.318 -0.966 17.307 0.5 32.32 ? N46 O25 268 A 1 HETATM 25 C C47 O25 . . . F 4 2.538 -2.259 17.572 0.5 32.47 ? C47 O25 268 A 1 HETATM 26 C C48 O25 . . . F 4 3.226 -2.624 18.851 0.5 31.71 ? C48 O25 268 A 1 HETATM 27 F F49 O25 . . . F 4 4.524 -3.023 18.746 0.5 30.49 ? F49 O25 268 A 1 HETATM 28 F F50 O25 . . . F 4 2.471 -3.56 19.474 0.5 33 ? F50 O25 268 A 1 HETATM 29 F F51 O25 . . . F 4 3.299 -1.568 19.688 0.5 31.34 ? F51 O25 268 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 240 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 29 #