data_3O6H # _model_server_result.job_id HQhQGBINBJly36iazfbK0A _model_server_result.datetime_utc '2024-11-06 02:46:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":269}' # _entry.id 3O6H # _exptl.entry_id 3O6H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O6H _cell.length_a 63.89 _cell.length_b 87.45 _cell.length_c 47.32 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6H _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 206 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 206 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 261 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 261 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.01 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 3O6H _atom_sites.fract_transf_matrix[1][1] 0.015652 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011435 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021133 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLU A 1 264 1 GLU GLU . C 3 SO4 A 1 265 1 SO4 SO4 . D 3 SO4 A 1 266 2 SO4 SO4 . E 3 SO4 A 1 267 3 SO4 SO4 . F 4 O25 A 1 268 1 O25 O25 . G 5 DMS A 1 269 1 DMS DMS . H 6 EDO A 1 270 1 EDO EDO . I 6 EDO A 1 271 1 EDO EDO . J 7 HOH A 1 272 1 HOH HOH . J 7 HOH A 2 273 2 HOH HOH . J 7 HOH A 3 274 3 HOH HOH . J 7 HOH A 4 275 4 HOH HOH . J 7 HOH A 5 276 5 HOH HOH . J 7 HOH A 6 277 6 HOH HOH . J 7 HOH A 7 278 7 HOH HOH . J 7 HOH A 8 279 8 HOH HOH . J 7 HOH A 9 280 9 HOH HOH . J 7 HOH A 10 281 10 HOH HOH . J 7 HOH A 11 282 11 HOH HOH . J 7 HOH A 12 283 12 HOH HOH . J 7 HOH A 13 284 13 HOH HOH . J 7 HOH A 14 285 14 HOH HOH . J 7 HOH A 15 286 15 HOH HOH . J 7 HOH A 16 287 16 HOH HOH . J 7 HOH A 17 288 17 HOH HOH . J 7 HOH A 18 289 18 HOH HOH . J 7 HOH A 19 290 19 HOH HOH . J 7 HOH A 20 291 20 HOH HOH . J 7 HOH A 21 292 21 HOH HOH . J 7 HOH A 22 293 22 HOH HOH . J 7 HOH A 23 294 23 HOH HOH . J 7 HOH A 24 295 24 HOH HOH . J 7 HOH A 25 296 25 HOH HOH . J 7 HOH A 26 297 26 HOH HOH . J 7 HOH A 27 298 27 HOH HOH . J 7 HOH A 28 299 28 HOH HOH . J 7 HOH A 29 300 29 HOH HOH . J 7 HOH A 30 301 30 HOH HOH . J 7 HOH A 31 302 31 HOH HOH . J 7 HOH A 32 303 32 HOH HOH . J 7 HOH A 33 304 33 HOH HOH . J 7 HOH A 34 305 34 HOH HOH . J 7 HOH A 35 306 35 HOH HOH . J 7 HOH A 36 307 36 HOH HOH . J 7 HOH A 37 308 37 HOH HOH . J 7 HOH A 38 309 38 HOH HOH . J 7 HOH A 39 310 39 HOH HOH . J 7 HOH A 40 311 40 HOH HOH . J 7 HOH A 41 312 41 HOH HOH . J 7 HOH A 42 313 42 HOH HOH . J 7 HOH A 43 314 43 HOH HOH . J 7 HOH A 44 315 44 HOH HOH . J 7 HOH A 45 316 45 HOH HOH . J 7 HOH A 46 317 46 HOH HOH . J 7 HOH A 47 318 47 HOH HOH . J 7 HOH A 48 319 48 HOH HOH . J 7 HOH A 49 320 49 HOH HOH . J 7 HOH A 50 321 50 HOH HOH . J 7 HOH A 51 322 51 HOH HOH . J 7 HOH A 52 323 52 HOH HOH . J 7 HOH A 53 324 53 HOH HOH . J 7 HOH A 54 325 54 HOH HOH . J 7 HOH A 55 326 55 HOH HOH . J 7 HOH A 56 327 56 HOH HOH . J 7 HOH A 57 328 57 HOH HOH . J 7 HOH A 58 329 58 HOH HOH . J 7 HOH A 59 330 59 HOH HOH . J 7 HOH A 60 331 60 HOH HOH . J 7 HOH A 61 332 61 HOH HOH . J 7 HOH A 62 333 62 HOH HOH . J 7 HOH A 63 334 63 HOH HOH . J 7 HOH A 64 335 64 HOH HOH . J 7 HOH A 65 336 65 HOH HOH . J 7 HOH A 66 337 66 HOH HOH . J 7 HOH A 67 338 67 HOH HOH . J 7 HOH A 68 339 68 HOH HOH . J 7 HOH A 69 340 69 HOH HOH . J 7 HOH A 70 341 70 HOH HOH . J 7 HOH A 71 342 71 HOH HOH . J 7 HOH A 72 343 72 HOH HOH . J 7 HOH A 73 344 73 HOH HOH . J 7 HOH A 74 345 74 HOH HOH . J 7 HOH A 75 346 75 HOH HOH . J 7 HOH A 76 347 76 HOH HOH . J 7 HOH A 77 348 77 HOH HOH . J 7 HOH A 78 349 78 HOH HOH . J 7 HOH A 79 350 79 HOH HOH . J 7 HOH A 80 351 80 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . G 5 0.069 -5.606 12.741 0.5 28.66 ? S DMS 269 A 1 HETATM 2 O O DMS . . . G 5 -1.448 -5.206 11.849 0.5 29.22 ? O DMS 269 A 1 HETATM 3 C C1 DMS . . . G 5 0.103 -4.884 14.403 0.5 29.87 ? C1 DMS 269 A 1 HETATM 4 C C2 DMS . . . G 5 0.029 -7.363 13.225 0.5 29.57 ? C2 DMS 269 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #