data_3O6I # _model_server_result.job_id s5B0DanQqEVoWMQKujBHkg _model_server_result.datetime_utc '2024-11-05 01:54:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":265}' # _entry.id 3O6I # _exptl.entry_id 3O6I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 403.542 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-[({3-tert-butyl-4-[(methylamino)methyl]-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O6I _cell.length_a 64.24 _cell.length_b 87.8 _cell.length_c 47.38 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6I _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 206 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 206 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 261 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 261 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C20 H29 N5 O2 S' _chem_comp.formula_weight 403.542 _chem_comp.id O26 _chem_comp.mon_nstd_flag . _chem_comp.name 2-[({3-tert-butyl-4-[(methylamino)methyl]-1H-pyrazol-1-yl}acetyl)amino]-4,5,6,7-tetrahydro-1-benzothiophene-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3O6I _atom_sites.fract_transf_matrix[1][1] 0.015567 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01139 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GLU A 1 264 1 GLU GLU . C 3 O26 A 1 265 1 O26 O26 . D 4 SO4 A 1 266 1 SO4 SO4 . E 4 SO4 A 1 267 2 SO4 SO4 . F 4 SO4 A 1 268 3 SO4 SO4 . G 4 SO4 A 1 269 4 SO4 SO4 . H 4 SO4 A 1 270 5 SO4 SO4 . I 5 HOH A 1 271 271 HOH HOH . I 5 HOH A 2 272 272 HOH HOH . I 5 HOH A 3 273 1 HOH HOH . I 5 HOH A 4 274 2 HOH HOH . I 5 HOH A 5 275 275 HOH HOH . I 5 HOH A 6 276 3 HOH HOH . I 5 HOH A 7 277 277 HOH HOH . I 5 HOH A 8 278 278 HOH HOH . I 5 HOH A 9 279 279 HOH HOH . I 5 HOH A 10 280 4 HOH HOH . I 5 HOH A 11 281 6 HOH HOH . I 5 HOH A 12 282 7 HOH HOH . I 5 HOH A 13 283 283 HOH HOH . I 5 HOH A 14 284 8 HOH HOH . I 5 HOH A 15 285 9 HOH HOH . I 5 HOH A 16 286 286 HOH HOH . I 5 HOH A 17 287 287 HOH HOH . I 5 HOH A 18 288 288 HOH HOH . I 5 HOH A 19 289 289 HOH HOH . I 5 HOH A 20 290 10 HOH HOH . I 5 HOH A 21 291 11 HOH HOH . I 5 HOH A 22 292 12 HOH HOH . I 5 HOH A 23 293 293 HOH HOH . I 5 HOH A 24 294 13 HOH HOH . I 5 HOH A 25 295 14 HOH HOH . I 5 HOH A 26 296 296 HOH HOH . I 5 HOH A 27 297 297 HOH HOH . I 5 HOH A 28 298 298 HOH HOH . I 5 HOH A 29 299 299 HOH HOH . I 5 HOH A 30 300 300 HOH HOH . I 5 HOH A 31 301 301 HOH HOH . I 5 HOH A 32 302 302 HOH HOH . I 5 HOH A 33 303 303 HOH HOH . I 5 HOH A 34 304 304 HOH HOH . I 5 HOH A 35 305 305 HOH HOH . I 5 HOH A 36 306 306 HOH HOH . I 5 HOH A 37 307 15 HOH HOH . I 5 HOH A 38 308 16 HOH HOH . I 5 HOH A 39 309 17 HOH HOH . I 5 HOH A 40 310 18 HOH HOH . I 5 HOH A 41 311 19 HOH HOH . I 5 HOH A 42 312 20 HOH HOH . I 5 HOH A 43 313 21 HOH HOH . I 5 HOH A 44 314 22 HOH HOH . I 5 HOH A 45 315 23 HOH HOH . I 5 HOH A 46 316 24 HOH HOH . I 5 HOH A 47 317 25 HOH HOH . I 5 HOH A 48 318 26 HOH HOH . I 5 HOH A 49 319 27 HOH HOH . I 5 HOH A 50 320 28 HOH HOH . I 5 HOH A 51 321 29 HOH HOH . I 5 HOH A 52 322 30 HOH HOH . I 5 HOH A 53 323 31 HOH HOH . I 5 HOH A 54 324 32 HOH HOH . I 5 HOH A 55 325 33 HOH HOH . I 5 HOH A 56 326 34 HOH HOH . I 5 HOH A 57 327 35 HOH HOH . I 5 HOH A 58 328 36 HOH HOH . I 5 HOH A 59 329 37 HOH HOH . I 5 HOH A 60 330 38 HOH HOH . I 5 HOH A 61 331 39 HOH HOH . I 5 HOH A 62 332 40 HOH HOH . I 5 HOH A 63 333 41 HOH HOH . I 5 HOH A 64 334 42 HOH HOH . I 5 HOH A 65 335 43 HOH HOH . I 5 HOH A 66 336 44 HOH HOH . I 5 HOH A 67 337 45 HOH HOH . I 5 HOH A 68 338 46 HOH HOH . I 5 HOH A 69 339 47 HOH HOH . I 5 HOH A 70 340 48 HOH HOH . I 5 HOH A 71 341 49 HOH HOH . I 5 HOH A 72 342 50 HOH HOH . I 5 HOH A 73 343 51 HOH HOH . I 5 HOH A 74 344 52 HOH HOH . I 5 HOH A 75 345 54 HOH HOH . I 5 HOH A 76 346 55 HOH HOH . I 5 HOH A 77 347 56 HOH HOH . I 5 HOH A 78 348 57 HOH HOH . I 5 HOH A 79 349 58 HOH HOH . I 5 HOH A 80 350 59 HOH HOH . I 5 HOH A 81 351 60 HOH HOH . I 5 HOH A 82 352 61 HOH HOH . I 5 HOH A 83 353 62 HOH HOH . I 5 HOH A 84 354 63 HOH HOH . I 5 HOH A 85 355 65 HOH HOH . I 5 HOH A 86 356 66 HOH HOH . I 5 HOH A 87 357 67 HOH HOH . I 5 HOH A 88 358 68 HOH HOH . I 5 HOH A 89 359 69 HOH HOH . I 5 HOH A 90 360 70 HOH HOH . I 5 HOH A 91 361 71 HOH HOH . I 5 HOH A 92 362 72 HOH HOH . I 5 HOH A 93 363 73 HOH HOH . I 5 HOH A 94 364 74 HOH HOH . I 5 HOH A 95 365 75 HOH HOH . I 5 HOH A 96 366 76 HOH HOH . I 5 HOH A 97 367 77 HOH HOH . I 5 HOH A 98 368 78 HOH HOH . I 5 HOH A 99 369 79 HOH HOH . I 5 HOH A 100 370 80 HOH HOH . I 5 HOH A 101 371 81 HOH HOH . I 5 HOH A 102 372 82 HOH HOH . I 5 HOH A 103 373 83 HOH HOH . I 5 HOH A 104 374 84 HOH HOH . I 5 HOH A 105 375 85 HOH HOH . I 5 HOH A 106 376 86 HOH HOH . I 5 HOH A 107 377 87 HOH HOH . I 5 HOH A 108 378 88 HOH HOH . I 5 HOH A 109 379 89 HOH HOH . I 5 HOH A 110 380 90 HOH HOH . I 5 HOH A 111 381 91 HOH HOH . I 5 HOH A 112 382 92 HOH HOH . I 5 HOH A 113 383 93 HOH HOH . I 5 HOH A 114 384 94 HOH HOH . I 5 HOH A 115 385 95 HOH HOH . I 5 HOH A 116 386 96 HOH HOH . I 5 HOH A 117 387 97 HOH HOH . I 5 HOH A 118 388 98 HOH HOH . I 5 HOH A 119 389 99 HOH HOH . I 5 HOH A 120 390 100 HOH HOH . I 5 HOH A 121 391 101 HOH HOH . I 5 HOH A 122 392 102 HOH HOH . I 5 HOH A 123 393 103 HOH HOH . I 5 HOH A 124 394 104 HOH HOH . I 5 HOH A 125 395 105 HOH HOH . I 5 HOH A 126 396 106 HOH HOH . I 5 HOH A 127 397 107 HOH HOH . I 5 HOH A 128 398 108 HOH HOH . I 5 HOH A 129 399 109 HOH HOH . I 5 HOH A 130 400 110 HOH HOH . I 5 HOH A 131 401 111 HOH HOH . I 5 HOH A 132 402 112 HOH HOH . I 5 HOH A 133 403 113 HOH HOH . I 5 HOH A 134 404 114 HOH HOH . I 5 HOH A 135 405 115 HOH HOH . I 5 HOH A 136 406 116 HOH HOH . I 5 HOH A 137 407 117 HOH HOH . I 5 HOH A 138 408 118 HOH HOH . I 5 HOH A 139 409 119 HOH HOH . I 5 HOH A 140 410 120 HOH HOH . I 5 HOH A 141 411 121 HOH HOH . I 5 HOH A 142 412 122 HOH HOH . I 5 HOH A 143 413 123 HOH HOH . I 5 HOH A 144 414 124 HOH HOH . I 5 HOH A 145 415 126 HOH HOH . I 5 HOH A 146 416 127 HOH HOH . I 5 HOH A 147 417 128 HOH HOH . I 5 HOH A 148 418 129 HOH HOH . I 5 HOH A 149 419 130 HOH HOH . I 5 HOH A 150 420 131 HOH HOH . I 5 HOH A 151 421 132 HOH HOH . I 5 HOH A 152 422 133 HOH HOH . I 5 HOH A 153 423 134 HOH HOH . I 5 HOH A 154 424 135 HOH HOH . I 5 HOH A 155 425 136 HOH HOH . I 5 HOH A 156 426 137 HOH HOH . I 5 HOH A 157 427 138 HOH HOH . I 5 HOH A 158 428 139 HOH HOH . I 5 HOH A 159 429 140 HOH HOH . I 5 HOH A 160 430 141 HOH HOH . I 5 HOH A 161 431 142 HOH HOH . I 5 HOH A 162 432 144 HOH HOH . I 5 HOH A 163 433 208 HOH HOH . I 5 HOH A 164 434 209 HOH HOH . I 5 HOH A 165 435 210 HOH HOH . I 5 HOH A 166 436 214 HOH HOH . I 5 HOH A 167 437 216 HOH HOH . I 5 HOH A 168 438 217 HOH HOH . I 5 HOH A 169 439 218 HOH HOH . I 5 HOH A 170 440 220 HOH HOH . I 5 HOH A 171 441 221 HOH HOH . I 5 HOH A 172 442 222 HOH HOH . I 5 HOH A 173 443 223 HOH HOH . I 5 HOH A 174 444 224 HOH HOH . I 5 HOH A 175 445 225 HOH HOH . I 5 HOH A 176 446 226 HOH HOH . I 5 HOH A 177 447 227 HOH HOH . I 5 HOH A 178 448 229 HOH HOH . I 5 HOH A 179 449 230 HOH HOH . I 5 HOH A 180 450 231 HOH HOH . I 5 HOH A 181 451 232 HOH HOH . I 5 HOH A 182 452 233 HOH HOH . I 5 HOH A 183 453 234 HOH HOH . I 5 HOH A 184 454 235 HOH HOH . I 5 HOH A 185 455 236 HOH HOH . I 5 HOH A 186 456 238 HOH HOH . I 5 HOH A 187 457 239 HOH HOH . I 5 HOH A 188 458 240 HOH HOH . I 5 HOH A 189 459 241 HOH HOH . I 5 HOH A 190 460 242 HOH HOH . I 5 HOH A 191 461 244 HOH HOH . I 5 HOH A 192 462 247 HOH HOH . I 5 HOH A 193 463 253 HOH HOH . I 5 HOH A 194 464 254 HOH HOH . I 5 HOH A 195 465 255 HOH HOH . I 5 HOH A 196 466 256 HOH HOH . I 5 HOH A 197 467 258 HOH HOH . I 5 HOH A 198 468 259 HOH HOH . I 5 HOH A 199 469 260 HOH HOH . I 5 HOH A 200 470 261 HOH HOH . I 5 HOH A 201 471 262 HOH HOH . I 5 HOH A 202 472 269 HOH HOH . I 5 HOH A 203 473 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 O26 . . . C 3 2.17 -3.448 16.314 0.5 23.01 ? C1 O26 265 A 1 HETATM 2 C C2 O26 . . . C 3 2.704 -2.688 17.429 0.5 22.67 ? C2 O26 265 A 1 HETATM 3 C C3 O26 . . . C 3 3.333 -3.185 18.675 0.5 21.72 ? C3 O26 265 A 1 HETATM 4 C C4 O26 . . . C 3 3.326 -2.07 19.752 0.5 20.84 ? C4 O26 265 A 1 HETATM 5 C C5 O26 . . . C 3 2.598 -4.453 19.23 0.5 20.75 ? C5 O26 265 A 1 HETATM 6 C C6 O26 . . . C 3 4.715 -3.566 18.459 0.5 20.2 ? C6 O26 265 A 1 HETATM 7 N N7 O26 . . . C 3 2.596 -1.362 17.121 0.5 22.5 ? N7 O26 265 A 1 HETATM 8 N N8 O26 . . . C 3 2.013 -1.281 15.893 0.5 23.85 ? N8 O26 265 A 1 HETATM 9 C C9 O26 . . . C 3 1.711 0.024 15.284 0.5 23.83 ? C9 O26 265 A 1 HETATM 10 C C10 O26 . . . C 3 0.241 0.285 15.57 0.5 23.5 ? C10 O26 265 A 1 HETATM 11 O O11 O26 . . . C 3 -0.397 -0.67 15.921 0.5 22.89 ? O11 O26 265 A 1 HETATM 12 N N12 O26 . . . C 3 -0.353 1.526 15.421 0.5 21.59 ? N12 O26 265 A 1 HETATM 13 C C13 O26 . . . C 3 -1.194 2.237 16.272 0.5 18.53 ? C13 O26 265 A 1 HETATM 14 S S14 O26 . . . C 3 -2.279 1.362 17.277 0.5 18.56 ? S14 O26 265 A 1 HETATM 15 C C15 O26 . . . C 3 -2.905 2.794 17.962 0.5 19.41 ? C15 O26 265 A 1 HETATM 16 C C16 O26 . . . C 3 -3.967 2.769 19.021 0.5 19.42 ? C16 O26 265 A 1 HETATM 17 C C17 O26 . . . C 3 -4.678 4.121 19.108 0.5 19.6 ? C17 O26 265 A 1 HETATM 18 C C18 O26 . . . C 3 -3.697 5.302 19.134 0.5 18.78 ? C18 O26 265 A 1 HETATM 19 C C19 O26 . . . C 3 -2.771 5.313 17.894 0.5 19.4 ? C19 O26 265 A 1 HETATM 20 C C20 O26 . . . C 3 -2.339 3.94 17.424 0.5 19.59 ? C20 O26 265 A 1 HETATM 21 C C21 O26 . . . C 3 -1.333 3.602 16.413 0.5 19.24 ? C21 O26 265 A 1 HETATM 22 C C22 O26 . . . C 3 -0.504 4.511 15.627 0.5 20.1 ? C22 O26 265 A 1 HETATM 23 O O23 O26 . . . C 3 0.538 4.127 15.089 0.5 24.64 ? O23 O26 265 A 1 HETATM 24 N N24 O26 . . . C 3 -0.933 5.809 15.519 0.5 15.1 ? N24 O26 265 A 1 HETATM 25 C C25 O26 . . . C 3 1.746 -2.509 15.386 0.5 24.82 ? C25 O26 265 A 1 HETATM 26 C C26 O26 . . . C 3 2.08 -4.929 16.108 0.5 23.15 ? C26 O26 265 A 1 HETATM 27 N N27 O26 . . . C 3 0.799 -5.487 16.534 0.5 21.12 ? N27 O26 265 A 1 HETATM 28 C C28 O26 . . . C 3 0.94 -6.916 16.722 0.5 20.68 ? C28 O26 265 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 352 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 28 #