data_3O6J # _model_server_result.job_id wKA2wPB_J685cc56ioWjrw _model_server_result.datetime_utc '2024-11-24 22:45:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":258}' # _entry.id 3O6J # _exptl.entry_id 3O6J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.11 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description benzene-1,2,4-triol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3O6J _cell.length_a 90.18 _cell.length_b 90.18 _cell.length_c 305.92 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6J _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 134 A TYR 134 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc2 A NE2 HIS 194 A HIS 194 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc3 A NE2 HIS 196 A HIS 196 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? metalc ? metalc4 E O2 HQN . A HQN 258 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc5 B OH TYR 134 B TYR 134 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? metalc ? metalc6 B NE2 HIS 194 B HIS 194 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc7 B NE2 HIS 196 B HIS 196 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? # _chem_comp.formula 'C6 H6 O3' _chem_comp.formula_weight 126.11 _chem_comp.id HQN _chem_comp.mon_nstd_flag . _chem_comp.name benzene-1,2,4-triol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C1 HQN doub 152 n y C1 C2 HQN sing 153 n y C1 H1 HQN sing 154 n n C3 O1 HQN sing 155 n n O1 HO1 HQN sing 156 n n C2 O2 HQN sing 157 n n C2 C3 HQN doub 158 n y O2 HO2 HQN sing 159 n n C4 C3 HQN sing 160 n y O3 C6 HQN sing 161 n n O3 HO3 HQN sing 162 n n C5 C4 HQN doub 163 n y C4 H4 HQN sing 164 n n C6 C5 HQN sing 165 n y C5 H5 HQN sing 166 n n # _atom_sites.entry_id 3O6J _atom_sites.fract_transf_matrix[1][1] 0.011089 _atom_sites.fract_transf_matrix[1][2] 0.006402 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012804 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003269 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FE A 1 300 300 FE FE . D 3 MYY A 1 304 304 MYY MYY . E 4 HQN A 1 258 1 HQN HQN . F 5 CL A 1 259 1 CL CL . G 2 FE B 1 301 301 FE FE . H 3 MYY B 1 303 303 MYY MYY . I 6 HOH A 1 260 2 HOH HOH . I 6 HOH A 2 261 4 HOH HOH . I 6 HOH A 3 262 5 HOH HOH . I 6 HOH A 4 263 6 HOH HOH . I 6 HOH A 5 264 7 HOH HOH . I 6 HOH A 6 265 8 HOH HOH . I 6 HOH A 7 266 9 HOH HOH . I 6 HOH A 8 267 10 HOH HOH . I 6 HOH A 9 268 11 HOH HOH . I 6 HOH A 10 269 12 HOH HOH . I 6 HOH A 11 270 14 HOH HOH . I 6 HOH A 12 271 15 HOH HOH . I 6 HOH A 13 272 16 HOH HOH . I 6 HOH A 14 273 17 HOH HOH . I 6 HOH A 15 274 18 HOH HOH . I 6 HOH A 16 275 19 HOH HOH . I 6 HOH A 17 276 20 HOH HOH . I 6 HOH A 18 277 21 HOH HOH . I 6 HOH A 19 278 22 HOH HOH . I 6 HOH A 20 279 23 HOH HOH . I 6 HOH A 21 280 25 HOH HOH . I 6 HOH A 22 281 26 HOH HOH . J 6 HOH B 1 258 1 HOH HOH . J 6 HOH B 2 259 3 HOH HOH . J 6 HOH B 3 260 13 HOH HOH . J 6 HOH B 4 261 24 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 HQN . . . E 4 25 61.006 291.122 1 64.44 ? C1 HQN 258 A 1 HETATM 2 O O1 HQN . . . E 4 24.182 58.93 294.02 1 66.57 ? O1 HQN 258 A 1 HETATM 3 C C2 HQN . . . E 4 24.331 60.531 292.251 1 62.62 ? C2 HQN 258 A 1 HETATM 4 O O2 HQN . . . E 4 23.241 61.118 292.81 1 58.32 ? O2 HQN 258 A 1 HETATM 5 C C3 HQN . . . E 4 24.848 59.345 292.922 1 63.53 ? C3 HQN 258 A 1 HETATM 6 O O3 HQN . . . E 4 26.788 60.799 289.523 1 66.53 ? O3 HQN 258 A 1 HETATM 7 C C4 HQN . . . E 4 25.959 58.701 292.409 1 65.44 ? C4 HQN 258 A 1 HETATM 8 C C5 HQN . . . E 4 26.603 59.196 291.266 1 64.07 ? C5 HQN 258 A 1 HETATM 9 C C6 HQN . . . E 4 26.136 60.34 290.633 1 65.34 ? C6 HQN 258 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 287 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #