data_3O6J
#
_model_server_result.job_id            9d41qdSOCSwQw-ZiiRBC6g 
_model_server_result.datetime_utc      '2024-11-24 22:47:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3o6j 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":304}' 
#
_entry.id    3O6J 
#
_exptl.entry_id    3O6J 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              620.838 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3O6J 
_cell.length_a            90.18 
_cell.length_b            90.18 
_cell.length_c            305.92 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3O6J 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        182 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 63 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 H N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OH TYR 134 A TYR 134 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? 
metalc ? metalc2 A NE2 HIS 194 A HIS 194 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
metalc ? metalc3 A NE2 HIS 196 A HIS 196 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.015 ? 
metalc ? metalc4 E O2 HQN . A HQN 258 1_555 C FE FE . A FE 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
metalc ? metalc5 B OH TYR 134 B TYR 134 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.715 ? 
metalc ? metalc6 B NE2 HIS 194 B HIS 194 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? 
metalc ? metalc7 B NE2 HIS 196 B HIS 196 1_555 G FE FE . B FE 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.752 ? 
#
_chem_comp.formula           'C33 H65 O8 P' 
_chem_comp.formula_weight    620.838 
_chem_comp.id                MYY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-3-(PHOSPHONOOXY)-2-(TETRADECANOYLOXY)PROPYL PALMITATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C38 C37 MYY sing 252 n n 
C38 H381 MYY sing 253 n n 
C38 H382 MYY sing 254 n n 
C38 H383 MYY sing 255 n n 
C37 C36 MYY sing 256 n n 
C37 H371 MYY sing 257 n n 
C37 H372 MYY sing 258 n n 
C36 C35 MYY sing 259 n n 
C36 H361 MYY sing 260 n n 
C36 H362 MYY sing 261 n n 
C35 C34 MYY sing 262 n n 
C35 H351 MYY sing 263 n n 
C35 H352 MYY sing 264 n n 
C34 C33 MYY sing 265 n n 
C34 H341 MYY sing 266 n n 
C34 H342 MYY sing 267 n n 
C33 C32 MYY sing 268 n n 
C33 H331 MYY sing 269 n n 
C33 H332 MYY sing 270 n n 
C32 C31 MYY sing 271 n n 
C32 H321 MYY sing 272 n n 
C32 H322 MYY sing 273 n n 
C31 C30 MYY sing 274 n n 
C31 H311 MYY sing 275 n n 
C31 H312 MYY sing 276 n n 
C30 C29 MYY sing 277 n n 
C30 H301 MYY sing 278 n n 
C30 H302 MYY sing 279 n n 
C29 C28 MYY sing 280 n n 
C29 H291 MYY sing 281 n n 
C29 H292 MYY sing 282 n n 
C28 C27 MYY sing 283 n n 
C28 H281 MYY sing 284 n n 
C28 H282 MYY sing 285 n n 
C27 C26 MYY sing 286 n n 
C27 H271 MYY sing 287 n n 
C27 H272 MYY sing 288 n n 
C26 C25 MYY sing 289 n n 
C26 H261 MYY sing 290 n n 
C26 H262 MYY sing 291 n n 
C25 C24 MYY sing 292 n n 
C25 H251 MYY sing 293 n n 
C25 H252 MYY sing 294 n n 
C24 C23 MYY sing 295 n n 
C24 H241 MYY sing 296 n n 
C24 H242 MYY sing 297 n n 
C23 O10 MYY doub 298 n n 
C23 O8 MYY sing 299 n n 
O8 C6 MYY sing 300 n n 
C6 C5 MYY sing 301 n n 
C6 H6C1 MYY sing 302 n n 
C6 H6C2 MYY sing 303 n n 
C5 C4 MYY sing 304 n n 
C5 O7 MYY sing 305 n n 
C5 H5 MYY sing 306 n n 
C4 O6 MYY sing 307 n n 
C4 H4C1 MYY sing 308 n n 
C4 H4C2 MYY sing 309 n n 
O6 P MYY sing 310 n n 
P O4 MYY sing 311 n n 
P O3 MYY sing 312 n n 
P O5 MYY doub 313 n n 
O4 H4 MYY sing 314 n n 
O3 H3 MYY sing 315 n n 
O7 C7 MYY sing 316 n n 
C7 O9 MYY doub 317 n n 
C7 C8 MYY sing 318 n n 
C8 C9 MYY sing 319 n n 
C8 H8C1 MYY sing 320 n n 
C8 H8C2 MYY sing 321 n n 
C9 C10 MYY sing 322 n n 
C9 H9C1 MYY sing 323 n n 
C9 H9C2 MYY sing 324 n n 
C10 C11 MYY sing 325 n n 
C10 H101 MYY sing 326 n n 
C10 H102 MYY sing 327 n n 
C11 C12 MYY sing 328 n n 
C11 H111 MYY sing 329 n n 
C11 H112 MYY sing 330 n n 
C12 C13 MYY sing 331 n n 
C12 H121 MYY sing 332 n n 
C12 H122 MYY sing 333 n n 
C13 C14 MYY sing 334 n n 
C13 H131 MYY sing 335 n n 
C13 H132 MYY sing 336 n n 
C14 C15 MYY sing 337 n n 
C14 H141 MYY sing 338 n n 
C14 H142 MYY sing 339 n n 
C15 C16 MYY sing 340 n n 
C15 H151 MYY sing 341 n n 
C15 H152 MYY sing 342 n n 
C16 C17 MYY sing 343 n n 
C16 H161 MYY sing 344 n n 
C16 H162 MYY sing 345 n n 
C17 C18 MYY sing 346 n n 
C17 H171 MYY sing 347 n n 
C17 H172 MYY sing 348 n n 
C18 C19 MYY sing 349 n n 
C18 H181 MYY sing 350 n n 
C18 H182 MYY sing 351 n n 
C19 C20 MYY sing 352 n n 
C19 H191 MYY sing 353 n n 
C19 H192 MYY sing 354 n n 
C20 H201 MYY sing 355 n n 
C20 H202 MYY sing 356 n n 
C20 H203 MYY sing 357 n n 
#
_atom_sites.entry_id                     3O6J 
_atom_sites.fract_transf_matrix[1][1]    0.011089 
_atom_sites.fract_transf_matrix[1][2]    0.006402 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012804 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003269 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 FE A 1 300 300 FE FE . 
D 3 MYY A 1 304 304 MYY MYY . 
E 4 HQN A 1 258 1 HQN HQN . 
F 5 CL A 1 259 1 CL CL . 
G 2 FE B 1 301 301 FE FE . 
H 3 MYY B 1 303 303 MYY MYY . 
I 6 HOH A 1 260 2 HOH HOH . 
I 6 HOH A 2 261 4 HOH HOH . 
I 6 HOH A 3 262 5 HOH HOH . 
I 6 HOH A 4 263 6 HOH HOH . 
I 6 HOH A 5 264 7 HOH HOH . 
I 6 HOH A 6 265 8 HOH HOH . 
I 6 HOH A 7 266 9 HOH HOH . 
I 6 HOH A 8 267 10 HOH HOH . 
I 6 HOH A 9 268 11 HOH HOH . 
I 6 HOH A 10 269 12 HOH HOH . 
I 6 HOH A 11 270 14 HOH HOH . 
I 6 HOH A 12 271 15 HOH HOH . 
I 6 HOH A 13 272 16 HOH HOH . 
I 6 HOH A 14 273 17 HOH HOH . 
I 6 HOH A 15 274 18 HOH HOH . 
I 6 HOH A 16 275 19 HOH HOH . 
I 6 HOH A 17 276 20 HOH HOH . 
I 6 HOH A 18 277 21 HOH HOH . 
I 6 HOH A 19 278 22 HOH HOH . 
I 6 HOH A 20 279 23 HOH HOH . 
I 6 HOH A 21 280 25 HOH HOH . 
I 6 HOH A 22 281 26 HOH HOH . 
J 6 HOH B 1 258 1 HOH HOH . 
J 6 HOH B 2 259 3 HOH HOH . 
J 6 HOH B 3 260 13 HOH HOH . 
J 6 HOH B 4 261 24 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C38 MYY . . . D 3 35.538 60.064 272.977 1 53.13 ? C38 MYY 304 A 1 
HETATM 2 C C37 MYY . . . D 3 34.574 60.202 271.814 1 52.61 ? C37 MYY 304 A 1 
HETATM 3 C C36 MYY . . . D 3 33.168 60.458 272.341 1 56.26 ? C36 MYY 304 A 1 
HETATM 4 C C35 MYY . . . D 3 32.151 60.502 271.207 1 56.71 ? C35 MYY 304 A 1 
HETATM 5 C C34 MYY . . . D 3 30.757 60.832 271.729 1 53.65 ? C34 MYY 304 A 1 
HETATM 6 C C33 MYY . . . D 3 30.118 61.866 270.839 1 49.24 ? C33 MYY 304 A 1 
HETATM 7 C C32 MYY . . . D 3 28.62 61.784 270.943 1 48.85 ? C32 MYY 304 A 1 
HETATM 8 C C31 MYY . . . D 3 28.006 62.2 269.617 1 49.7 ? C31 MYY 304 A 1 
HETATM 9 C C30 MYY . . . D 3 26.776 63.056 269.864 1 51.29 ? C30 MYY 304 A 1 
HETATM 10 C C29 MYY . . . D 3 25.808 62.978 268.706 1 51.47 ? C29 MYY 304 A 1 
HETATM 11 C C28 MYY . . . D 3 24.413 63.004 269.265 1 53.6 ? C28 MYY 304 A 1 
HETATM 12 C C27 MYY . . . D 3 23.405 62.783 268.167 1 55.43 ? C27 MYY 304 A 1 
HETATM 13 C C26 MYY . . . D 3 22.28 63.8 268.267 1 57.41 ? C26 MYY 304 A 1 
HETATM 14 C C25 MYY . . . D 3 20.979 63.23 267.721 1 60.38 ? C25 MYY 304 A 1 
HETATM 15 C C24 MYY . . . D 3 20.23 64.314 266.965 1 69.86 ? C24 MYY 304 A 1 
HETATM 16 C C23 MYY . . . D 3 18.762 64.214 267.275 1 76.41 ? C23 MYY 304 A 1 
HETATM 17 O O10 MYY . . . D 3 18.382 63.344 268.051 1 78.22 ? O10 MYY 304 A 1 
HETATM 18 O O8 MYY . . . D 3 17.812 65.164 266.638 1 80.8 ? O8 MYY 304 A 1 
HETATM 19 C C6 MYY . . . D 3 16.54 65.281 267.321 1 86.69 ? C6 MYY 304 A 1 
HETATM 20 C C5 MYY . . . D 3 16.565 66.005 268.703 1 88.15 ? C5 MYY 304 A 1 
HETATM 21 C C4 MYY . . . D 3 15.77 67.325 268.666 1 85.23 ? C4 MYY 304 A 1 
HETATM 22 O O7 MYY . . . D 3 17.911 66.139 269.261 1 84.44 ? O7 MYY 304 A 1 
HETATM 23 C C7 MYY . . . D 3 18.603 67.423 269.012 1 84.19 ? C7 MYY 304 A 1 
HETATM 24 O O9 MYY . . . D 3 18.766 67.83 267.867 1 81.11 ? O9 MYY 304 A 1 
HETATM 25 C C8 MYY . . . D 3 19.152 68.223 270.167 1 76.64 ? C8 MYY 304 A 1 
HETATM 26 C C9 MYY . . . D 3 20.524 68.771 269.788 1 69.16 ? C9 MYY 304 A 1 
HETATM 27 C C10 MYY . . . D 3 21.622 67.797 270.172 1 64.93 ? C10 MYY 304 A 1 
HETATM 28 C C11 MYY . . . D 3 22.981 68.486 270.211 1 65.38 ? C11 MYY 304 A 1 
HETATM 29 C C12 MYY . . . D 3 24.117 67.448 270.254 1 64.24 ? C12 MYY 304 A 1 
HETATM 30 C C13 MYY . . . D 3 25.199 67.766 269.219 1 62.91 ? C13 MYY 304 A 1 
HETATM 31 C C14 MYY . . . D 3 26.415 66.853 269.366 1 60.2 ? C14 MYY 304 A 1 
HETATM 32 C C15 MYY . . . D 3 27.557 67.652 269.98 1 58.03 ? C15 MYY 304 A 1 
HETATM 33 C C16 MYY . . . D 3 28.808 66.686 270.338 1 57.5 ? C16 MYY 304 A 1 
HETATM 34 C C17 MYY . . . D 3 28.71 66.418 271.951 1 51.66 ? C17 MYY 304 A 1 
HETATM 35 C C18 MYY . . . D 3 29.897 66.937 272.78 1 55.98 ? C18 MYY 304 A 1 
HETATM 36 C C19 MYY . . . D 3 29.621 66.802 274.302 1 55.29 ? C19 MYY 304 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           36 
#