data_3O6O # _model_server_result.job_id rK-BqMTmhy7Kzo38kO_uJg _model_server_result.datetime_utc '2024-11-22 13:18:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6o # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":214}' # _entry.id 3O6O # _exptl.entry_id 3O6O _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.762 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-chloro-9-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-9H-purin-2-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.28 _cell.angle_gamma 90 _cell.entry_id 3O6O _cell.length_a 55.65 _cell.length_b 65.812 _cell.length_c 62.745 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6O _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C14 H15 Cl N6 O' _chem_comp.formula_weight 318.762 _chem_comp.id 94M _chem_comp.mon_nstd_flag . _chem_comp.name 6-chloro-9-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-9H-purin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BIIB021 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 94M doub 38 n y N1 C6 94M sing 39 n y C2 N2 94M sing 40 n n C2 N3 94M sing 41 n y N3 C4 94M doub 42 n y C4 C5 94M sing 43 n y C4 N9 94M sing 44 n y C5 C6 94M doub 45 n y C5 N7 94M sing 46 n y C6 CL6 94M sing 47 n n N7 C8 94M doub 48 n y C8 N9 94M sing 49 n y N9 CAH 94M sing 50 n n CAA OAM 94M sing 51 n n CAB CAN 94M sing 52 n n CAC CAP 94M sing 53 n n CAF NAI 94M doub 54 n y CAF CAN 94M sing 55 n y CAH CAR 94M sing 56 n n NAI CAR 94M sing 57 n y OAM CAS 94M sing 58 n n CAN CAS 94M doub 59 n y CAP CAR 94M doub 60 n y CAP CAS 94M sing 61 n y N2 HN2 94M sing 62 n n N2 HN2A 94M sing 63 n n C8 H8 94M sing 64 n n CAA HAA 94M sing 65 n n CAA HAAA 94M sing 66 n n CAA HAAB 94M sing 67 n n CAB HAB 94M sing 68 n n CAB HABA 94M sing 69 n n CAB HABB 94M sing 70 n n CAC HAC 94M sing 71 n n CAC HACA 94M sing 72 n n CAC HACB 94M sing 73 n n CAF HAF 94M sing 74 n n CAH HAH 94M sing 75 n n CAH HAHA 94M sing 76 n n # _atom_sites.entry_id 3O6O _atom_sites.fract_transf_matrix[1][1] 0.017969 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000715 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015195 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01595 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 94M A 1 214 1 94M 94M . D 2 94M B 1 214 1 94M 94M . E 3 1PE B 1 1300 1300 1PE 1PE . F 4 HOH A 1 215 215 HOH HOH . F 4 HOH A 2 216 216 HOH HOH . F 4 HOH A 3 217 217 HOH HOH . F 4 HOH A 4 218 3 HOH HOH . F 4 HOH A 5 219 219 HOH HOH . F 4 HOH A 6 220 220 HOH HOH . F 4 HOH A 7 221 5 HOH HOH . F 4 HOH A 8 222 222 HOH HOH . F 4 HOH A 9 223 223 HOH HOH . F 4 HOH A 10 224 224 HOH HOH . F 4 HOH A 11 225 225 HOH HOH . F 4 HOH A 12 226 6 HOH HOH . F 4 HOH A 13 227 8 HOH HOH . F 4 HOH A 14 228 10 HOH HOH . F 4 HOH A 15 229 11 HOH HOH . F 4 HOH A 16 230 17 HOH HOH . F 4 HOH A 17 231 19 HOH HOH . F 4 HOH A 18 232 20 HOH HOH . F 4 HOH A 19 233 21 HOH HOH . F 4 HOH A 20 234 22 HOH HOH . F 4 HOH A 21 235 24 HOH HOH . F 4 HOH A 22 236 236 HOH HOH . F 4 HOH A 23 237 25 HOH HOH . F 4 HOH A 24 238 29 HOH HOH . F 4 HOH A 25 239 30 HOH HOH . F 4 HOH A 26 240 240 HOH HOH . F 4 HOH A 27 241 32 HOH HOH . F 4 HOH A 28 242 33 HOH HOH . F 4 HOH A 29 243 35 HOH HOH . F 4 HOH A 30 244 36 HOH HOH . F 4 HOH A 31 245 38 HOH HOH . F 4 HOH A 32 246 40 HOH HOH . F 4 HOH A 33 247 44 HOH HOH . F 4 HOH A 34 248 45 HOH HOH . F 4 HOH A 35 249 46 HOH HOH . F 4 HOH A 36 250 49 HOH HOH . F 4 HOH A 37 251 51 HOH HOH . F 4 HOH A 38 252 52 HOH HOH . F 4 HOH A 39 253 53 HOH HOH . F 4 HOH A 40 254 57 HOH HOH . F 4 HOH A 41 255 63 HOH HOH . F 4 HOH A 42 256 64 HOH HOH . F 4 HOH A 43 257 66 HOH HOH . F 4 HOH A 44 258 67 HOH HOH . F 4 HOH A 45 259 69 HOH HOH . F 4 HOH A 46 260 71 HOH HOH . F 4 HOH A 47 261 72 HOH HOH . F 4 HOH A 48 262 73 HOH HOH . F 4 HOH A 49 263 75 HOH HOH . F 4 HOH A 50 264 80 HOH HOH . F 4 HOH A 51 265 85 HOH HOH . F 4 HOH A 52 266 88 HOH HOH . F 4 HOH A 53 267 89 HOH HOH . F 4 HOH A 54 268 91 HOH HOH . F 4 HOH A 55 269 94 HOH HOH . F 4 HOH A 56 270 95 HOH HOH . F 4 HOH A 57 271 97 HOH HOH . F 4 HOH A 58 272 98 HOH HOH . F 4 HOH A 59 273 99 HOH HOH . F 4 HOH A 60 274 102 HOH HOH . F 4 HOH A 61 275 111 HOH HOH . F 4 HOH A 62 276 113 HOH HOH . F 4 HOH A 63 277 114 HOH HOH . F 4 HOH A 64 278 115 HOH HOH . F 4 HOH A 65 279 117 HOH HOH . F 4 HOH A 66 280 119 HOH HOH . F 4 HOH A 67 281 121 HOH HOH . F 4 HOH A 68 282 122 HOH HOH . F 4 HOH A 69 283 123 HOH HOH . F 4 HOH A 70 284 124 HOH HOH . F 4 HOH A 71 285 127 HOH HOH . F 4 HOH A 72 286 129 HOH HOH . F 4 HOH A 73 287 133 HOH HOH . F 4 HOH A 74 288 135 HOH HOH . F 4 HOH A 75 289 138 HOH HOH . F 4 HOH A 76 290 139 HOH HOH . F 4 HOH A 77 291 140 HOH HOH . F 4 HOH A 78 292 143 HOH HOH . F 4 HOH A 79 293 150 HOH HOH . F 4 HOH A 80 294 155 HOH HOH . F 4 HOH A 81 295 156 HOH HOH . F 4 HOH A 82 296 157 HOH HOH . F 4 HOH A 83 297 158 HOH HOH . F 4 HOH A 84 298 162 HOH HOH . F 4 HOH A 85 299 169 HOH HOH . F 4 HOH A 86 300 170 HOH HOH . F 4 HOH A 87 301 171 HOH HOH . F 4 HOH A 88 302 176 HOH HOH . F 4 HOH A 89 303 181 HOH HOH . F 4 HOH A 90 304 183 HOH HOH . F 4 HOH A 91 305 184 HOH HOH . F 4 HOH A 92 306 185 HOH HOH . F 4 HOH A 93 307 186 HOH HOH . F 4 HOH A 94 308 191 HOH HOH . F 4 HOH A 95 309 192 HOH HOH . F 4 HOH A 96 310 196 HOH HOH . F 4 HOH A 97 311 198 HOH HOH . F 4 HOH A 98 312 205 HOH HOH . F 4 HOH A 99 313 207 HOH HOH . F 4 HOH A 100 314 209 HOH HOH . F 4 HOH A 101 315 211 HOH HOH . F 4 HOH A 102 316 212 HOH HOH . G 4 HOH B 1 215 7 HOH HOH . G 4 HOH B 2 216 9 HOH HOH . G 4 HOH B 3 217 12 HOH HOH . G 4 HOH B 4 218 218 HOH HOH . G 4 HOH B 5 219 13 HOH HOH . G 4 HOH B 6 220 14 HOH HOH . G 4 HOH B 7 221 221 HOH HOH . G 4 HOH B 8 222 15 HOH HOH . G 4 HOH B 9 223 16 HOH HOH . G 4 HOH B 10 224 18 HOH HOH . G 4 HOH B 11 225 23 HOH HOH . G 4 HOH B 12 226 226 HOH HOH . G 4 HOH B 13 227 227 HOH HOH . G 4 HOH B 14 228 228 HOH HOH . G 4 HOH B 15 229 229 HOH HOH . G 4 HOH B 16 230 230 HOH HOH . G 4 HOH B 17 231 231 HOH HOH . G 4 HOH B 18 232 232 HOH HOH . G 4 HOH B 19 233 233 HOH HOH . G 4 HOH B 20 234 234 HOH HOH . G 4 HOH B 21 235 235 HOH HOH . G 4 HOH B 22 236 26 HOH HOH . G 4 HOH B 23 237 237 HOH HOH . G 4 HOH B 24 238 238 HOH HOH . G 4 HOH B 25 239 239 HOH HOH . G 4 HOH B 26 240 27 HOH HOH . G 4 HOH B 27 241 31 HOH HOH . G 4 HOH B 28 242 34 HOH HOH . G 4 HOH B 29 243 37 HOH HOH . G 4 HOH B 30 244 39 HOH HOH . G 4 HOH B 31 245 41 HOH HOH . G 4 HOH B 32 246 43 HOH HOH . G 4 HOH B 33 247 47 HOH HOH . G 4 HOH B 34 248 48 HOH HOH . G 4 HOH B 35 249 50 HOH HOH . G 4 HOH B 36 250 56 HOH HOH . G 4 HOH B 37 251 59 HOH HOH . G 4 HOH B 38 252 61 HOH HOH . G 4 HOH B 39 253 65 HOH HOH . G 4 HOH B 40 254 70 HOH HOH . G 4 HOH B 41 255 74 HOH HOH . G 4 HOH B 42 256 76 HOH HOH . G 4 HOH B 43 257 77 HOH HOH . G 4 HOH B 44 258 79 HOH HOH . G 4 HOH B 45 259 81 HOH HOH . G 4 HOH B 46 260 82 HOH HOH . G 4 HOH B 47 261 83 HOH HOH . G 4 HOH B 48 262 84 HOH HOH . G 4 HOH B 49 263 92 HOH HOH . G 4 HOH B 50 264 93 HOH HOH . G 4 HOH B 51 265 96 HOH HOH . G 4 HOH B 52 266 100 HOH HOH . G 4 HOH B 53 267 103 HOH HOH . G 4 HOH B 54 268 105 HOH HOH . G 4 HOH B 55 269 106 HOH HOH . G 4 HOH B 56 270 107 HOH HOH . G 4 HOH B 57 271 112 HOH HOH . G 4 HOH B 58 272 116 HOH HOH . G 4 HOH B 59 273 118 HOH HOH . G 4 HOH B 60 274 120 HOH HOH . G 4 HOH B 61 275 126 HOH HOH . G 4 HOH B 62 276 130 HOH HOH . G 4 HOH B 63 277 131 HOH HOH . G 4 HOH B 64 278 132 HOH HOH . G 4 HOH B 65 279 134 HOH HOH . G 4 HOH B 66 280 136 HOH HOH . G 4 HOH B 67 281 137 HOH HOH . G 4 HOH B 68 282 144 HOH HOH . G 4 HOH B 69 283 145 HOH HOH . G 4 HOH B 70 284 146 HOH HOH . G 4 HOH B 71 285 147 HOH HOH . G 4 HOH B 72 286 148 HOH HOH . G 4 HOH B 73 287 149 HOH HOH . G 4 HOH B 74 288 151 HOH HOH . G 4 HOH B 75 289 152 HOH HOH . G 4 HOH B 76 290 160 HOH HOH . G 4 HOH B 77 291 163 HOH HOH . G 4 HOH B 78 292 167 HOH HOH . G 4 HOH B 79 293 168 HOH HOH . G 4 HOH B 80 294 172 HOH HOH . G 4 HOH B 81 295 175 HOH HOH . G 4 HOH B 82 296 178 HOH HOH . G 4 HOH B 83 297 179 HOH HOH . G 4 HOH B 84 298 187 HOH HOH . G 4 HOH B 85 299 188 HOH HOH . G 4 HOH B 86 300 189 HOH HOH . G 4 HOH B 87 301 193 HOH HOH . G 4 HOH B 88 302 197 HOH HOH . G 4 HOH B 89 303 210 HOH HOH . G 4 HOH B 90 304 213 HOH HOH . G 4 HOH B 91 305 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 94M . . . D 2 20.626 20 22.715 1 24.72 ? N1 94M 214 B 1 HETATM 2 C C2 94M . . . D 2 19.924 20.332 23.82 1 19.09 ? C2 94M 214 B 1 HETATM 3 N N2 94M . . . D 2 20.088 19.61 24.92 1 20.95 ? N2 94M 214 B 1 HETATM 4 N N3 94M . . . D 2 19.127 21.421 23.829 1 23.81 ? N3 94M 214 B 1 HETATM 5 C C4 94M . . . D 2 18.956 22.157 22.702 1 30.1 ? C4 94M 214 B 1 HETATM 6 C C5 94M . . . D 2 19.67 21.843 21.552 1 28.97 ? C5 94M 214 B 1 HETATM 7 C C6 94M . . . D 2 20.503 20.718 21.575 1 18.78 ? C6 94M 214 B 1 HETATM 8 CL CL6 94M . . . D 2 21.442 20.272 20.188 1 40.23 ? CL6 94M 214 B 1 HETATM 9 N N7 94M . . . D 2 19.334 22.731 20.611 1 35.7 ? N7 94M 214 B 1 HETATM 10 C C8 94M . . . D 2 18.445 23.581 21.122 1 31.15 ? C8 94M 214 B 1 HETATM 11 N N9 94M . . . D 2 18.267 23.252 22.404 1 25.05 ? N9 94M 214 B 1 HETATM 12 C CAA 94M . . . D 2 21.617 27.794 24.211 1 26.64 ? CAA 94M 214 B 1 HETATM 13 C CAB 94M . . . D 2 18.924 29.629 23.752 1 36.19 ? CAB 94M 214 B 1 HETATM 14 C CAC 94M . . . D 2 19.988 24.787 24.916 1 26.91 ? CAC 94M 214 B 1 HETATM 15 C CAF 94M . . . D 2 17.428 27.69 23.034 1 31.22 ? CAF 94M 214 B 1 HETATM 16 C CAH 94M . . . D 2 17.396 23.987 23.345 1 33.2 ? CAH 94M 214 B 1 HETATM 17 N NAI 94M . . . D 2 17.125 26.392 22.994 1 19.75 ? NAI 94M 214 B 1 HETATM 18 O OAM 94M . . . D 2 20.487 27.626 24.999 1 36.18 ? OAM 94M 214 B 1 HETATM 19 C CAN 94M . . . D 2 18.581 28.131 23.681 1 50.96 ? CAN 94M 214 B 1 HETATM 20 C CAP 94M . . . D 2 19.07 25.826 24.229 1 33.41 ? CAP 94M 214 B 1 HETATM 21 C CAR 94M . . . D 2 17.91 25.431 23.537 1 18.61 ? CAR 94M 214 B 1 HETATM 22 C CAS 94M . . . D 2 19.409 27.189 24.289 1 54.29 ? CAS 94M 214 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 22 #