data_3O6T # _model_server_result.job_id k5mJgQ6VTcEvbcb5x_xT5Q _model_server_result.datetime_utc '2024-12-21 16:17:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o6t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":118}' # _entry.id 3O6T # _exptl.entry_id 3O6T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.31 _cell.angle_gamma 90 _cell.entry_id 3O6T _cell.length_a 110.221 _cell.length_b 75.095 _cell.length_c 65.244 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O6T _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,I 1 1 B,J 2 1 C,G,H,K 3 1 D,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 39 A CYS 37 1_555 E C15 PX5 . A PX5 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.85 ? covale ? covale2 C SG CYS 39 C CYS 37 1_555 G C15 PX5 . C PX5 117 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 216 n n C1 C2 PGE sing 217 n n C1 H1 PGE sing 218 n n C1 H12 PGE sing 219 n n O1 HO1 PGE sing 220 n n C2 O2 PGE sing 221 n n C2 H2 PGE sing 222 n n C2 H22 PGE sing 223 n n O2 C3 PGE sing 224 n n C3 C4 PGE sing 225 n n C3 H3 PGE sing 226 n n C3 H32 PGE sing 227 n n C4 O3 PGE sing 228 n n C4 H4 PGE sing 229 n n C4 H42 PGE sing 230 n n O4 C6 PGE sing 231 n n O4 HO4 PGE sing 232 n n C6 C5 PGE sing 233 n n C6 H6 PGE sing 234 n n C6 H62 PGE sing 235 n n C5 O3 PGE sing 236 n n C5 H5 PGE sing 237 n n C5 H52 PGE sing 238 n n # _atom_sites.entry_id 3O6T _atom_sites.fract_transf_matrix[1][1] 0.009073 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002828 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013316 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PX5 A 1 117 1 PX5 PX5 . F 3 PGE A 1 118 1 PGE PGE . G 2 PX5 C 1 117 1 PX5 PX5 . H 3 PGE C 1 118 1 PGE PGE . I 4 HOH A 1 119 119 HOH HOH . I 4 HOH A 2 120 120 HOH HOH . I 4 HOH A 3 121 121 HOH HOH . I 4 HOH A 4 122 8 HOH HOH . I 4 HOH A 5 123 123 HOH HOH . I 4 HOH A 6 124 14 HOH HOH . I 4 HOH A 7 125 15 HOH HOH . I 4 HOH A 8 126 16 HOH HOH . I 4 HOH A 9 127 127 HOH HOH . I 4 HOH A 10 128 17 HOH HOH . I 4 HOH A 11 129 18 HOH HOH . I 4 HOH A 12 130 130 HOH HOH . I 4 HOH A 13 131 23 HOH HOH . I 4 HOH A 14 132 26 HOH HOH . I 4 HOH A 15 133 133 HOH HOH . I 4 HOH A 16 134 134 HOH HOH . I 4 HOH A 17 135 135 HOH HOH . I 4 HOH A 18 136 136 HOH HOH . I 4 HOH A 19 137 28 HOH HOH . I 4 HOH A 20 138 29 HOH HOH . I 4 HOH A 21 139 31 HOH HOH . I 4 HOH A 22 140 35 HOH HOH . I 4 HOH A 23 141 36 HOH HOH . I 4 HOH A 24 142 39 HOH HOH . I 4 HOH A 25 143 41 HOH HOH . I 4 HOH A 26 144 42 HOH HOH . I 4 HOH A 27 145 145 HOH HOH . I 4 HOH A 28 146 146 HOH HOH . I 4 HOH A 29 147 49 HOH HOH . I 4 HOH A 30 148 52 HOH HOH . I 4 HOH A 31 149 149 HOH HOH . I 4 HOH A 32 150 54 HOH HOH . I 4 HOH A 33 151 57 HOH HOH . I 4 HOH A 34 152 152 HOH HOH . I 4 HOH A 35 153 62 HOH HOH . I 4 HOH A 36 154 154 HOH HOH . I 4 HOH A 37 155 65 HOH HOH . I 4 HOH A 38 156 81 HOH HOH . I 4 HOH A 39 157 85 HOH HOH . I 4 HOH A 40 158 158 HOH HOH . I 4 HOH A 41 159 91 HOH HOH . I 4 HOH A 42 160 95 HOH HOH . I 4 HOH A 43 161 96 HOH HOH . I 4 HOH A 44 162 102 HOH HOH . I 4 HOH A 45 163 105 HOH HOH . I 4 HOH A 46 164 107 HOH HOH . I 4 HOH A 47 165 109 HOH HOH . I 4 HOH A 48 166 111 HOH HOH . I 4 HOH A 49 167 113 HOH HOH . I 4 HOH A 50 168 115 HOH HOH . I 4 HOH A 51 169 116 HOH HOH . J 4 HOH B 1 117 9 HOH HOH . J 4 HOH B 2 118 10 HOH HOH . J 4 HOH B 3 119 19 HOH HOH . J 4 HOH B 4 120 20 HOH HOH . J 4 HOH B 5 121 22 HOH HOH . J 4 HOH B 6 122 43 HOH HOH . J 4 HOH B 7 123 46 HOH HOH . J 4 HOH B 8 124 48 HOH HOH . J 4 HOH B 9 125 61 HOH HOH . J 4 HOH B 10 126 126 HOH HOH . J 4 HOH B 11 127 68 HOH HOH . J 4 HOH B 12 128 128 HOH HOH . J 4 HOH B 13 129 69 HOH HOH . J 4 HOH B 14 130 76 HOH HOH . J 4 HOH B 15 131 79 HOH HOH . J 4 HOH B 16 132 93 HOH HOH . J 4 HOH B 17 133 101 HOH HOH . J 4 HOH B 18 134 104 HOH HOH . J 4 HOH B 19 135 114 HOH HOH . J 4 HOH B 20 140 140 HOH HOH . J 4 HOH B 21 143 143 HOH HOH . J 4 HOH B 22 147 147 HOH HOH . J 4 HOH B 23 148 148 HOH HOH . J 4 HOH B 24 150 150 HOH HOH . J 4 HOH B 25 156 156 HOH HOH . J 4 HOH B 26 160 160 HOH HOH . K 4 HOH C 1 119 3 HOH HOH . K 4 HOH C 2 120 4 HOH HOH . K 4 HOH C 3 121 6 HOH HOH . K 4 HOH C 4 122 12 HOH HOH . K 4 HOH C 5 123 27 HOH HOH . K 4 HOH C 6 124 124 HOH HOH . K 4 HOH C 7 125 125 HOH HOH . K 4 HOH C 8 126 33 HOH HOH . K 4 HOH C 9 127 37 HOH HOH . K 4 HOH C 10 128 38 HOH HOH . K 4 HOH C 11 129 40 HOH HOH . K 4 HOH C 12 130 44 HOH HOH . K 4 HOH C 13 131 45 HOH HOH . K 4 HOH C 14 132 132 HOH HOH . K 4 HOH C 15 133 47 HOH HOH . K 4 HOH C 16 134 50 HOH HOH . K 4 HOH C 17 135 53 HOH HOH . K 4 HOH C 18 136 55 HOH HOH . K 4 HOH C 19 137 137 HOH HOH . K 4 HOH C 20 138 58 HOH HOH . K 4 HOH C 21 139 139 HOH HOH . K 4 HOH C 22 140 59 HOH HOH . K 4 HOH C 23 141 63 HOH HOH . K 4 HOH C 24 142 64 HOH HOH . K 4 HOH C 25 143 67 HOH HOH . K 4 HOH C 26 144 71 HOH HOH . K 4 HOH C 27 145 73 HOH HOH . K 4 HOH C 28 146 75 HOH HOH . K 4 HOH C 29 147 80 HOH HOH . K 4 HOH C 30 148 82 HOH HOH . K 4 HOH C 31 149 99 HOH HOH . K 4 HOH C 32 150 100 HOH HOH . K 4 HOH C 33 151 151 HOH HOH . K 4 HOH C 34 152 103 HOH HOH . K 4 HOH C 35 153 153 HOH HOH . K 4 HOH C 36 154 110 HOH HOH . K 4 HOH C 37 155 118 HOH HOH . L 4 HOH D 1 117 1 HOH HOH . L 4 HOH D 2 118 2 HOH HOH . L 4 HOH D 3 119 5 HOH HOH . L 4 HOH D 4 120 7 HOH HOH . L 4 HOH D 5 121 11 HOH HOH . L 4 HOH D 6 122 122 HOH HOH . L 4 HOH D 7 123 21 HOH HOH . L 4 HOH D 8 124 24 HOH HOH . L 4 HOH D 9 125 25 HOH HOH . L 4 HOH D 10 126 30 HOH HOH . L 4 HOH D 11 127 32 HOH HOH . L 4 HOH D 12 128 34 HOH HOH . L 4 HOH D 13 129 129 HOH HOH . L 4 HOH D 14 130 51 HOH HOH . L 4 HOH D 15 131 60 HOH HOH . L 4 HOH D 16 132 70 HOH HOH . L 4 HOH D 17 133 72 HOH HOH . L 4 HOH D 18 134 77 HOH HOH . L 4 HOH D 19 135 78 HOH HOH . L 4 HOH D 20 136 83 HOH HOH . L 4 HOH D 21 137 89 HOH HOH . L 4 HOH D 22 138 138 HOH HOH . L 4 HOH D 23 139 92 HOH HOH . L 4 HOH D 24 140 94 HOH HOH . L 4 HOH D 25 141 141 HOH HOH . L 4 HOH D 26 142 142 HOH HOH . L 4 HOH D 27 143 97 HOH HOH . L 4 HOH D 28 144 144 HOH HOH . L 4 HOH D 29 145 98 HOH HOH . L 4 HOH D 30 146 106 HOH HOH . L 4 HOH D 31 147 108 HOH HOH . L 4 HOH D 32 148 112 HOH HOH . L 4 HOH D 33 155 155 HOH HOH . L 4 HOH D 34 157 157 HOH HOH . L 4 HOH D 35 159 159 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . H 3 35.518 3.889 23.483 1 28.67 ? C1 PGE 118 C 1 HETATM 2 O O1 PGE . . . H 3 35.941 4.997 24.209 1 38.62 ? O1 PGE 118 C 1 HETATM 3 C C2 PGE . . . H 3 35.242 4.314 22.079 1 26.71 ? C2 PGE 118 C 1 HETATM 4 O O2 PGE . . . H 3 36.109 5.316 21.636 1 27.6 ? O2 PGE 118 C 1 HETATM 5 C C3 PGE . . . H 3 36.017 5.418 20.25 1 30.6 ? C3 PGE 118 C 1 HETATM 6 C C4 PGE . . . H 3 36.349 6.77 19.737 1 26.35 ? C4 PGE 118 C 1 HETATM 7 O O4 PGE . . . H 3 39.312 7.846 21.763 1 47.73 ? O4 PGE 118 C 1 HETATM 8 C C6 PGE . . . H 3 39.353 8.578 20.549 1 44.49 ? C6 PGE 118 C 1 HETATM 9 C C5 PGE . . . H 3 38.148 8.24 19.687 1 33.46 ? C5 PGE 118 C 1 HETATM 10 O O3 PGE . . . H 3 37.646 7.011 20.12 1 35.65 ? O3 PGE 118 C 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 247 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #