data_3O73 # _model_server_result.job_id hdTBFs2IM1pZCSzwJYfrmg _model_server_result.datetime_utc '2024-10-14 08:26:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o73 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":238}' # _entry.id 3O73 # _exptl.entry_id 3O73 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 785.55 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN-ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O73 _cell.length_a 57.08 _cell.length_b 82.05 _cell.length_c 106.34 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O73 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 174 A HIS 173 1_555 C ZN ZN . A ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc2 A ND1 HIS 178 A HIS 177 1_555 C ZN ZN . A ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc3 A O CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc4 A SG CYS 223 A CYS 222 1_555 C ZN ZN . A ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc5 B ND1 HIS 174 B HIS 173 1_555 G ZN ZN . B ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc6 B ND1 HIS 178 B HIS 177 1_555 G ZN ZN . B ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc7 B SG CYS 223 B CYS 222 1_555 G ZN ZN . B ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc8 B O CYS 223 B CYS 222 1_555 G ZN ZN . B ZN 237 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? # _chem_comp.formula 'C27 H33 N9 O15 P2' _chem_comp.formula_weight 785.55 _chem_comp.id FAD _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN-ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A FAD doub 83 n n PA O2A FAD sing 84 n n PA O5B FAD sing 85 n n PA O3P FAD sing 86 n n O2A HOA2 FAD sing 87 n n O5B C5B FAD sing 88 n n C5B C4B FAD sing 89 n n C5B H51A FAD sing 90 n n C5B H52A FAD sing 91 n n C4B O4B FAD sing 92 n n C4B C3B FAD sing 93 n n C4B H4B FAD sing 94 n n O4B C1B FAD sing 95 n n C3B O3B FAD sing 96 n n C3B C2B FAD sing 97 n n C3B H3B FAD sing 98 n n O3B HO3A FAD sing 99 n n C2B O2B FAD sing 100 n n C2B C1B FAD sing 101 n n C2B H2B FAD sing 102 n n O2B HO2A FAD sing 103 n n C1B N9A FAD sing 104 n n C1B H1B FAD sing 105 n n N9A C8A FAD sing 106 n y N9A C4A FAD sing 107 n y C8A N7A FAD doub 108 n y C8A H8A FAD sing 109 n n N7A C5A FAD sing 110 n y C5A C6A FAD sing 111 n y C5A C4A FAD doub 112 n y C6A N6A FAD sing 113 n n C6A N1A FAD doub 114 n y N6A H61A FAD sing 115 n n N6A H62A FAD sing 116 n n N1A C2A FAD sing 117 n y C2A N3A FAD doub 118 n y C2A H2A FAD sing 119 n n N3A C4A FAD sing 120 n y N1 C2 FAD sing 121 n n N1 C10 FAD doub 122 n n C2 O2 FAD doub 123 n n C2 N3 FAD sing 124 n n N3 C4 FAD sing 125 n n N3 HN3 FAD sing 126 n n C4 O4 FAD doub 127 n n C4 C4X FAD sing 128 n n C4X N5 FAD doub 129 n n C4X C10 FAD sing 130 n n N5 C5X FAD sing 131 n n C5X C6 FAD doub 132 n y C5X C9A FAD sing 133 n y C6 C7 FAD sing 134 n y C6 H6 FAD sing 135 n n C7 C7M FAD sing 136 n n C7 C8 FAD doub 137 n y C7M HM71 FAD sing 138 n n C7M HM72 FAD sing 139 n n C7M HM73 FAD sing 140 n n C8 C8M FAD sing 141 n n C8 C9 FAD sing 142 n y C8M HM81 FAD sing 143 n n C8M HM82 FAD sing 144 n n C8M HM83 FAD sing 145 n n C9 C9A FAD doub 146 n y C9 H9 FAD sing 147 n n C9A N10 FAD sing 148 n n N10 C10 FAD sing 149 n n N10 C1' FAD sing 150 n n C1' C2' FAD sing 151 n n C1' "H1'1" FAD sing 152 n n C1' "H1'2" FAD sing 153 n n C2' O2' FAD sing 154 n n C2' C3' FAD sing 155 n n C2' H2' FAD sing 156 n n O2' HO2' FAD sing 157 n n C3' O3' FAD sing 158 n n C3' C4' FAD sing 159 n n C3' H3' FAD sing 160 n n O3' HO3' FAD sing 161 n n C4' O4' FAD sing 162 n n C4' C5' FAD sing 163 n n C4' H4' FAD sing 164 n n O4' HO4' FAD sing 165 n n C5' O5' FAD sing 166 n n C5' "H5'1" FAD sing 167 n n C5' "H5'2" FAD sing 168 n n O5' P FAD sing 169 n n P O1P FAD doub 170 n n P O2P FAD sing 171 n n P O3P FAD sing 172 n n O2P HOP2 FAD sing 173 n n # _atom_sites.entry_id 3O73 _atom_sites.fract_transf_matrix[1][1] 0.017519 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012188 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009404 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 237 231 ZN ZN . D 3 FAD A 1 238 234 FAD FAD . E 4 O73 A 1 239 1 O73 O73 . F 4 O73 A 1 240 1 O73 O73 . G 2 ZN B 1 237 232 ZN ZN . H 3 FAD B 1 238 233 FAD FAD . I 5 HOH A 1 241 1 HOH HOH . I 5 HOH A 2 242 7 HOH HOH . I 5 HOH A 3 243 8 HOH HOH . I 5 HOH A 4 244 11 HOH HOH . I 5 HOH A 5 245 12 HOH HOH . I 5 HOH A 6 246 13 HOH HOH . I 5 HOH A 7 247 14 HOH HOH . I 5 HOH A 8 248 15 HOH HOH . I 5 HOH A 9 249 22 HOH HOH . I 5 HOH A 10 250 23 HOH HOH . I 5 HOH A 11 251 24 HOH HOH . I 5 HOH A 12 252 26 HOH HOH . I 5 HOH A 13 254 29 HOH HOH . I 5 HOH A 14 255 33 HOH HOH . I 5 HOH A 15 256 34 HOH HOH . I 5 HOH A 16 257 35 HOH HOH . I 5 HOH A 17 258 38 HOH HOH . I 5 HOH A 18 259 40 HOH HOH . I 5 HOH A 19 260 41 HOH HOH . I 5 HOH A 20 261 42 HOH HOH . I 5 HOH A 21 262 43 HOH HOH . I 5 HOH A 22 263 44 HOH HOH . I 5 HOH A 23 264 47 HOH HOH . I 5 HOH A 24 265 48 HOH HOH . I 5 HOH A 25 266 52 HOH HOH . I 5 HOH A 26 267 53 HOH HOH . I 5 HOH A 27 268 54 HOH HOH . I 5 HOH A 28 269 57 HOH HOH . I 5 HOH A 29 270 58 HOH HOH . I 5 HOH A 30 271 60 HOH HOH . I 5 HOH A 31 272 62 HOH HOH . J 5 HOH B 1 239 2 HOH HOH . J 5 HOH B 2 240 3 HOH HOH . J 5 HOH B 3 241 4 HOH HOH . J 5 HOH B 4 242 5 HOH HOH . J 5 HOH B 5 243 6 HOH HOH . J 5 HOH B 6 244 9 HOH HOH . J 5 HOH B 7 245 10 HOH HOH . J 5 HOH B 8 246 16 HOH HOH . J 5 HOH B 9 247 17 HOH HOH . J 5 HOH B 10 248 18 HOH HOH . J 5 HOH B 11 249 19 HOH HOH . J 5 HOH B 12 250 20 HOH HOH . J 5 HOH B 13 251 21 HOH HOH . J 5 HOH B 14 252 25 HOH HOH . J 5 HOH B 15 253 27 HOH HOH . J 5 HOH B 16 254 30 HOH HOH . J 5 HOH B 17 255 31 HOH HOH . J 5 HOH B 18 256 32 HOH HOH . J 5 HOH B 19 257 36 HOH HOH . J 5 HOH B 20 258 37 HOH HOH . J 5 HOH B 21 259 39 HOH HOH . J 5 HOH B 22 260 45 HOH HOH . J 5 HOH B 23 261 46 HOH HOH . J 5 HOH B 24 262 49 HOH HOH . J 5 HOH B 25 263 50 HOH HOH . J 5 HOH B 26 264 51 HOH HOH . J 5 HOH B 27 265 55 HOH HOH . J 5 HOH B 28 266 56 HOH HOH . J 5 HOH B 29 267 59 HOH HOH . J 5 HOH B 30 268 61 HOH HOH . J 5 HOH B 31 269 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA FAD . . . D 3 -4.388 0.877 4.736 1 39.91 ? PA FAD 238 A 1 HETATM 2 O O1A FAD . . . D 3 -4.936 0.337 6.031 1 40.38 ? O1A FAD 238 A 1 HETATM 3 O O2A FAD . . . D 3 -3.83 -0.234 3.894 1 40.51 ? O2A FAD 238 A 1 HETATM 4 O O5B FAD . . . D 3 -5.725 1.514 4.146 1 38.93 ? O5B FAD 238 A 1 HETATM 5 C C5B FAD . . . D 3 -5.959 2.206 2.978 1 42.58 ? C5B FAD 238 A 1 HETATM 6 C C4B FAD . . . D 3 -7.363 1.781 2.477 1 46 ? C4B FAD 238 A 1 HETATM 7 O O4B FAD . . . D 3 -7.315 1.842 1.063 1 44.21 ? O4B FAD 238 A 1 HETATM 8 C C3B FAD . . . D 3 -7.718 0.325 2.801 1 46.45 ? C3B FAD 238 A 1 HETATM 9 O O3B FAD . . . D 3 -9.122 0.163 2.793 1 48.34 ? O3B FAD 238 A 1 HETATM 10 C C2B FAD . . . D 3 -7.157 -0.443 1.628 1 47.78 ? C2B FAD 238 A 1 HETATM 11 O O2B FAD . . . D 3 -7.888 -1.604 1.333 1 50.56 ? O2B FAD 238 A 1 HETATM 12 C C1B FAD . . . D 3 -7.373 0.547 0.5 1 47.07 ? C1B FAD 238 A 1 HETATM 13 N N9A FAD . . . D 3 -6.433 0.469 -0.638 1 46.99 ? N9A FAD 238 A 1 HETATM 14 C C8A FAD . . . D 3 -5.241 -0.188 -0.786 1 47.57 ? C8A FAD 238 A 1 HETATM 15 N N7A FAD . . . D 3 -4.769 0.088 -2.027 1 48.59 ? N7A FAD 238 A 1 HETATM 16 C C5A FAD . . . D 3 -5.664 0.902 -2.656 1 46.96 ? C5A FAD 238 A 1 HETATM 17 C C6A FAD . . . D 3 -5.707 1.487 -3.922 1 46.36 ? C6A FAD 238 A 1 HETATM 18 N N6A FAD . . . D 3 -5.01 0.934 -4.907 1 48.2 ? N6A FAD 238 A 1 HETATM 19 N N1A FAD . . . D 3 -6.762 2.295 -4.274 1 47.08 ? N1A FAD 238 A 1 HETATM 20 C C2A FAD . . . D 3 -7.794 2.526 -3.376 1 47.73 ? C2A FAD 238 A 1 HETATM 21 N N3A FAD . . . D 3 -7.763 1.947 -2.127 1 47.22 ? N3A FAD 238 A 1 HETATM 22 C C4A FAD . . . D 3 -6.704 1.15 -1.784 1 47.14 ? C4A FAD 238 A 1 HETATM 23 N N1 FAD . . . D 3 -1.637 8.455 12.348 1 25.64 ? N1 FAD 238 A 1 HETATM 24 C C2 FAD . . . D 3 -1.459 9.817 12.55 1 29.35 ? C2 FAD 238 A 1 HETATM 25 O O2 FAD . . . D 3 -2.165 10.633 11.904 1 25.02 ? O2 FAD 238 A 1 HETATM 26 N N3 FAD . . . D 3 -0.497 10.255 13.484 1 27.07 ? N3 FAD 238 A 1 HETATM 27 C C4 FAD . . . D 3 0.289 9.359 14.203 1 26.31 ? C4 FAD 238 A 1 HETATM 28 O O4 FAD . . . D 3 1.16 9.735 15 1 29.63 ? O4 FAD 238 A 1 HETATM 29 C C4X FAD . . . D 3 0.135 8.027 14.001 1 25.39 ? C4X FAD 238 A 1 HETATM 30 N N5 FAD . . . D 3 0.881 7.148 14.754 1 19.92 ? N5 FAD 238 A 1 HETATM 31 C C5X FAD . . . D 3 0.719 5.788 14.492 1 23.72 ? C5X FAD 238 A 1 HETATM 32 C C6 FAD . . . D 3 1.508 4.855 15.212 1 24.27 ? C6 FAD 238 A 1 HETATM 33 C C7 FAD . . . D 3 1.364 3.491 14.955 1 26.95 ? C7 FAD 238 A 1 HETATM 34 C C7M FAD . . . D 3 2.219 2.469 15.702 1 23.8 ? C7M FAD 238 A 1 HETATM 35 C C8 FAD . . . D 3 0.435 3.059 14.007 1 24.26 ? C8 FAD 238 A 1 HETATM 36 C C8M FAD . . . D 3 0.213 1.576 13.718 1 23.21 ? C8M FAD 238 A 1 HETATM 37 C C9 FAD . . . D 3 -0.35 3.997 13.296 1 25.9 ? C9 FAD 238 A 1 HETATM 38 C C9A FAD . . . D 3 -0.2 5.35 13.547 1 21.73 ? C9A FAD 238 A 1 HETATM 39 N N10 FAD . . . D 3 -0.956 6.238 12.828 1 26.91 ? N10 FAD 238 A 1 HETATM 40 C C10 FAD . . . D 3 -0.807 7.583 13.058 1 24.95 ? C10 FAD 238 A 1 HETATM 41 C C1' FAD . . . D 3 -1.997 5.832 11.788 1 25.05 ? C1' FAD 238 A 1 HETATM 42 C C2' FAD . . . D 3 -1.299 5.479 10.448 1 28.49 ? C2' FAD 238 A 1 HETATM 43 O O2' FAD . . . D 3 -0.372 6.506 10.04 1 24.23 ? O2' FAD 238 A 1 HETATM 44 C C3' FAD . . . D 3 -2.318 5.111 9.365 1 31.47 ? C3' FAD 238 A 1 HETATM 45 O O3' FAD . . . D 3 -3.122 4.048 9.878 1 32.49 ? O3' FAD 238 A 1 HETATM 46 C C4' FAD . . . D 3 -1.725 4.71 8.015 1 26.59 ? C4' FAD 238 A 1 HETATM 47 O O4' FAD . . . D 3 -1.101 5.817 7.451 1 29.33 ? O4' FAD 238 A 1 HETATM 48 C C5' FAD . . . D 3 -2.731 4.306 6.921 1 28.88 ? C5' FAD 238 A 1 HETATM 49 O O5' FAD . . . D 3 -1.905 3.924 5.808 1 31.42 ? O5' FAD 238 A 1 HETATM 50 P P FAD . . . D 3 -1.94 2.411 5.297 1 32.81 ? P FAD 238 A 1 HETATM 51 O O1P FAD . . . D 3 -1.485 1.443 6.349 1 34.61 ? O1P FAD 238 A 1 HETATM 52 O O2P FAD . . . D 3 -1.156 2.243 4.068 1 33.9 ? O2P FAD 238 A 1 HETATM 53 O O3P FAD . . . D 3 -3.496 2.201 4.982 1 34.6 ? O3P FAD 238 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 53 #