data_3O7W # _model_server_result.job_id 7KQOBmg0_W2E4D9XCa0Img _model_server_result.datetime_utc '2024-12-23 07:05:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o7w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":701}' # _entry.id 3O7W # _exptl.entry_id 3O7W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O7W _cell.length_a 49.086 _cell.length_b 63.296 _cell.length_c 81.77 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O7W _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3O7W _atom_sites.fract_transf_matrix[1][1] 0.020372 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015799 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012229 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 701 701 GOL GOL . C 3 SAM A 1 801 801 SAM SAM . D 4 NA A 1 1 1 NA NA . E 5 HOH A 1 2 2 HOH HOH . E 5 HOH A 2 3 3 HOH HOH . E 5 HOH A 3 5 5 HOH HOH . E 5 HOH A 4 6 6 HOH HOH . E 5 HOH A 5 7 7 HOH HOH . E 5 HOH A 6 8 8 HOH HOH . E 5 HOH A 7 9 9 HOH HOH . E 5 HOH A 8 10 10 HOH HOH . E 5 HOH A 9 11 11 HOH HOH . E 5 HOH A 10 12 12 HOH HOH . E 5 HOH A 11 14 14 HOH HOH . E 5 HOH A 12 15 15 HOH HOH . E 5 HOH A 13 335 18 HOH HOH . E 5 HOH A 14 336 20 HOH HOH . E 5 HOH A 15 337 21 HOH HOH . E 5 HOH A 16 338 22 HOH HOH . E 5 HOH A 17 339 23 HOH HOH . E 5 HOH A 18 340 24 HOH HOH . E 5 HOH A 19 341 25 HOH HOH . E 5 HOH A 20 342 26 HOH HOH . E 5 HOH A 21 343 27 HOH HOH . E 5 HOH A 22 344 28 HOH HOH . E 5 HOH A 23 345 29 HOH HOH . E 5 HOH A 24 346 30 HOH HOH . E 5 HOH A 25 347 31 HOH HOH . E 5 HOH A 26 348 32 HOH HOH . E 5 HOH A 27 349 33 HOH HOH . E 5 HOH A 28 350 34 HOH HOH . E 5 HOH A 29 351 35 HOH HOH . E 5 HOH A 30 352 36 HOH HOH . E 5 HOH A 31 353 37 HOH HOH . E 5 HOH A 32 354 38 HOH HOH . E 5 HOH A 33 355 39 HOH HOH . E 5 HOH A 34 356 40 HOH HOH . E 5 HOH A 35 357 41 HOH HOH . E 5 HOH A 36 358 42 HOH HOH . E 5 HOH A 37 359 44 HOH HOH . E 5 HOH A 38 360 45 HOH HOH . E 5 HOH A 39 361 47 HOH HOH . E 5 HOH A 40 362 48 HOH HOH . E 5 HOH A 41 363 49 HOH HOH . E 5 HOH A 42 364 50 HOH HOH . E 5 HOH A 43 365 51 HOH HOH . E 5 HOH A 44 366 52 HOH HOH . E 5 HOH A 45 367 54 HOH HOH . E 5 HOH A 46 368 55 HOH HOH . E 5 HOH A 47 369 56 HOH HOH . E 5 HOH A 48 370 57 HOH HOH . E 5 HOH A 49 371 58 HOH HOH . E 5 HOH A 50 372 59 HOH HOH . E 5 HOH A 51 373 60 HOH HOH . E 5 HOH A 52 374 61 HOH HOH . E 5 HOH A 53 375 63 HOH HOH . E 5 HOH A 54 376 65 HOH HOH . E 5 HOH A 55 377 66 HOH HOH . E 5 HOH A 56 378 67 HOH HOH . E 5 HOH A 57 379 68 HOH HOH . E 5 HOH A 58 380 70 HOH HOH . E 5 HOH A 59 381 71 HOH HOH . E 5 HOH A 60 382 72 HOH HOH . E 5 HOH A 61 383 73 HOH HOH . E 5 HOH A 62 384 74 HOH HOH . E 5 HOH A 63 385 75 HOH HOH . E 5 HOH A 64 386 76 HOH HOH . E 5 HOH A 65 387 77 HOH HOH . E 5 HOH A 66 388 78 HOH HOH . E 5 HOH A 67 389 79 HOH HOH . E 5 HOH A 68 390 80 HOH HOH . E 5 HOH A 69 391 81 HOH HOH . E 5 HOH A 70 392 82 HOH HOH . E 5 HOH A 71 393 83 HOH HOH . E 5 HOH A 72 394 84 HOH HOH . E 5 HOH A 73 395 86 HOH HOH . E 5 HOH A 74 396 87 HOH HOH . E 5 HOH A 75 397 88 HOH HOH . E 5 HOH A 76 398 90 HOH HOH . E 5 HOH A 77 399 91 HOH HOH . E 5 HOH A 78 400 94 HOH HOH . E 5 HOH A 79 401 95 HOH HOH . E 5 HOH A 80 402 96 HOH HOH . E 5 HOH A 81 403 99 HOH HOH . E 5 HOH A 82 404 100 HOH HOH . E 5 HOH A 83 405 102 HOH HOH . E 5 HOH A 84 406 105 HOH HOH . E 5 HOH A 85 407 106 HOH HOH . E 5 HOH A 86 408 107 HOH HOH . E 5 HOH A 87 409 109 HOH HOH . E 5 HOH A 88 410 110 HOH HOH . E 5 HOH A 89 411 115 HOH HOH . E 5 HOH A 90 412 116 HOH HOH . E 5 HOH A 91 413 117 HOH HOH . E 5 HOH A 92 414 119 HOH HOH . E 5 HOH A 93 415 121 HOH HOH . E 5 HOH A 94 416 122 HOH HOH . E 5 HOH A 95 417 123 HOH HOH . E 5 HOH A 96 418 125 HOH HOH . E 5 HOH A 97 419 129 HOH HOH . E 5 HOH A 98 420 130 HOH HOH . E 5 HOH A 99 421 131 HOH HOH . E 5 HOH A 100 422 134 HOH HOH . E 5 HOH A 101 423 135 HOH HOH . E 5 HOH A 102 424 137 HOH HOH . E 5 HOH A 103 425 139 HOH HOH . E 5 HOH A 104 426 140 HOH HOH . E 5 HOH A 105 427 141 HOH HOH . E 5 HOH A 106 428 143 HOH HOH . E 5 HOH A 107 429 145 HOH HOH . E 5 HOH A 108 430 146 HOH HOH . E 5 HOH A 109 431 147 HOH HOH . E 5 HOH A 110 432 148 HOH HOH . E 5 HOH A 111 433 149 HOH HOH . E 5 HOH A 112 434 151 HOH HOH . E 5 HOH A 113 435 152 HOH HOH . E 5 HOH A 114 436 153 HOH HOH . E 5 HOH A 115 437 155 HOH HOH . E 5 HOH A 116 438 156 HOH HOH . E 5 HOH A 117 439 157 HOH HOH . E 5 HOH A 118 440 158 HOH HOH . E 5 HOH A 119 441 159 HOH HOH . E 5 HOH A 120 442 160 HOH HOH . E 5 HOH A 121 443 163 HOH HOH . E 5 HOH A 122 444 165 HOH HOH . E 5 HOH A 123 445 168 HOH HOH . E 5 HOH A 124 446 170 HOH HOH . E 5 HOH A 125 447 171 HOH HOH . E 5 HOH A 126 448 172 HOH HOH . E 5 HOH A 127 449 173 HOH HOH . E 5 HOH A 128 450 174 HOH HOH . E 5 HOH A 129 451 177 HOH HOH . E 5 HOH A 130 452 178 HOH HOH . E 5 HOH A 131 453 179 HOH HOH . E 5 HOH A 132 454 181 HOH HOH . E 5 HOH A 133 455 182 HOH HOH . E 5 HOH A 134 456 183 HOH HOH . E 5 HOH A 135 457 186 HOH HOH . E 5 HOH A 136 458 188 HOH HOH . E 5 HOH A 137 459 191 HOH HOH . E 5 HOH A 138 460 193 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . B 2 36.302 18.693 3.036 1 34.81 ? C1 GOL 701 A 1 HETATM 2 O O1 GOL . . . B 2 34.96 18.672 2.582 1 35.7 ? O1 GOL 701 A 1 HETATM 3 C C2 GOL . . . B 2 36.681 17.413 2.427 1 26.85 ? C2 GOL 701 A 1 HETATM 4 O O2 GOL . . . B 2 36.249 17.582 1.104 1 29.64 ? O2 GOL 701 A 1 HETATM 5 C C3 GOL . . . B 2 35.659 16.499 3.018 1 28.35 ? C3 GOL 701 A 1 HETATM 6 O O3 GOL . . . B 2 36.244 15.293 3.454 1 38.46 ? O3 GOL 701 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #