data_3O80
#
_model_server_result.job_id            8WJzv7B7onbhVilZvJdEXQ 
_model_server_result.datetime_utc      '2024-11-13 07:46:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3o80 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":487}' 
#
_entry.id    3O80 
#
_exptl.entry_id    3O80 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              506.196 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3O80 
_cell.length_a            118.346 
_cell.length_b            233.904 
_cell.length_c            49.744 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3O80 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
_chem_comp.formula           'C10 H17 N6 O12 P3' 
_chem_comp.formula_weight    506.196 
_chem_comp.id                ANP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ANP doub 13 n n 
PG O2G ANP sing 14 n n 
PG O3G ANP sing 15 n n 
PG N3B ANP sing 16 n n 
O2G HOG2 ANP sing 17 n n 
O3G HOG3 ANP sing 18 n n 
PB O1B ANP doub 19 n n 
PB O2B ANP sing 20 n n 
PB N3B ANP sing 21 n n 
PB O3A ANP sing 22 n n 
O2B HOB2 ANP sing 23 n n 
N3B HNB1 ANP sing 24 n n 
PA O1A ANP doub 25 n n 
PA O2A ANP sing 26 n n 
PA O3A ANP sing 27 n n 
PA O5' ANP sing 28 n n 
O2A HOA2 ANP sing 29 n n 
O5' C5' ANP sing 30 n n 
C5' C4' ANP sing 31 n n 
C5' "H5'1" ANP sing 32 n n 
C5' "H5'2" ANP sing 33 n n 
C4' O4' ANP sing 34 n n 
C4' C3' ANP sing 35 n n 
C4' H4' ANP sing 36 n n 
O4' C1' ANP sing 37 n n 
C3' O3' ANP sing 38 n n 
C3' C2' ANP sing 39 n n 
C3' H3' ANP sing 40 n n 
O3' HO3' ANP sing 41 n n 
C2' O2' ANP sing 42 n n 
C2' C1' ANP sing 43 n n 
C2' H2' ANP sing 44 n n 
O2' HO2' ANP sing 45 n n 
C1' N9 ANP sing 46 n n 
C1' H1' ANP sing 47 n n 
N9 C8 ANP sing 48 n y 
N9 C4 ANP sing 49 n y 
C8 N7 ANP doub 50 n y 
C8 H8 ANP sing 51 n n 
N7 C5 ANP sing 52 n y 
C5 C6 ANP sing 53 n y 
C5 C4 ANP doub 54 n y 
C6 N6 ANP sing 55 n n 
C6 N1 ANP doub 56 n y 
N6 HN61 ANP sing 57 n n 
N6 HN62 ANP sing 58 n n 
N1 C2 ANP sing 59 n y 
C2 N3 ANP doub 60 n y 
C2 H2 ANP sing 61 n n 
N3 C4 ANP sing 62 n y 
#
_atom_sites.entry_id                     3O80 
_atom_sites.fract_transf_matrix[1][1]    0.00845 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.004275 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020103 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ANP A 1 486 486 ANP ANP . 
C 2 ANP A 1 487 487 ANP ANP . 
D 3 HOH A 1 500 500 HOH HOH . 
D 3 HOH A 2 501 501 HOH HOH . 
D 3 HOH A 3 502 502 HOH HOH . 
D 3 HOH A 4 503 503 HOH HOH . 
D 3 HOH A 5 504 504 HOH HOH . 
D 3 HOH A 6 505 505 HOH HOH . 
D 3 HOH A 7 506 506 HOH HOH . 
D 3 HOH A 8 507 507 HOH HOH . 
D 3 HOH A 9 508 508 HOH HOH . 
D 3 HOH A 10 509 509 HOH HOH . 
D 3 HOH A 11 510 510 HOH HOH . 
D 3 HOH A 12 511 511 HOH HOH . 
D 3 HOH A 13 512 512 HOH HOH . 
D 3 HOH A 14 513 513 HOH HOH . 
D 3 HOH A 15 514 514 HOH HOH . 
D 3 HOH A 16 515 515 HOH HOH . 
D 3 HOH A 17 516 516 HOH HOH . 
D 3 HOH A 18 517 517 HOH HOH . 
D 3 HOH A 19 518 518 HOH HOH . 
D 3 HOH A 20 519 519 HOH HOH . 
D 3 HOH A 21 520 520 HOH HOH . 
D 3 HOH A 22 521 521 HOH HOH . 
D 3 HOH A 23 522 522 HOH HOH . 
D 3 HOH A 24 523 523 HOH HOH . 
D 3 HOH A 25 524 524 HOH HOH . 
D 3 HOH A 26 525 525 HOH HOH . 
D 3 HOH A 27 526 526 HOH HOH . 
D 3 HOH A 28 527 527 HOH HOH . 
D 3 HOH A 29 528 528 HOH HOH . 
D 3 HOH A 30 529 529 HOH HOH . 
D 3 HOH A 31 530 530 HOH HOH . 
D 3 HOH A 32 531 531 HOH HOH . 
D 3 HOH A 33 532 532 HOH HOH . 
D 3 HOH A 34 533 533 HOH HOH . 
D 3 HOH A 35 534 534 HOH HOH . 
D 3 HOH A 36 535 535 HOH HOH . 
D 3 HOH A 37 536 536 HOH HOH . 
D 3 HOH A 38 537 537 HOH HOH . 
D 3 HOH A 39 538 538 HOH HOH . 
D 3 HOH A 40 539 539 HOH HOH . 
D 3 HOH A 41 540 540 HOH HOH . 
D 3 HOH A 42 541 541 HOH HOH . 
D 3 HOH A 43 542 542 HOH HOH . 
D 3 HOH A 44 543 543 HOH HOH . 
D 3 HOH A 45 544 544 HOH HOH . 
D 3 HOH A 46 545 545 HOH HOH . 
D 3 HOH A 47 546 546 HOH HOH . 
D 3 HOH A 48 547 547 HOH HOH . 
D 3 HOH A 49 548 548 HOH HOH . 
D 3 HOH A 50 549 549 HOH HOH . 
D 3 HOH A 51 550 550 HOH HOH . 
D 3 HOH A 52 551 551 HOH HOH . 
D 3 HOH A 53 552 552 HOH HOH . 
D 3 HOH A 54 553 553 HOH HOH . 
D 3 HOH A 55 554 554 HOH HOH . 
D 3 HOH A 56 555 555 HOH HOH . 
D 3 HOH A 57 556 556 HOH HOH . 
D 3 HOH A 58 557 557 HOH HOH . 
D 3 HOH A 59 558 558 HOH HOH . 
D 3 HOH A 60 559 559 HOH HOH . 
D 3 HOH A 61 560 560 HOH HOH . 
D 3 HOH A 62 561 561 HOH HOH . 
D 3 HOH A 63 562 562 HOH HOH . 
D 3 HOH A 64 563 563 HOH HOH . 
D 3 HOH A 65 564 564 HOH HOH . 
D 3 HOH A 66 565 565 HOH HOH . 
D 3 HOH A 67 566 566 HOH HOH . 
D 3 HOH A 68 567 567 HOH HOH . 
D 3 HOH A 69 568 568 HOH HOH . 
D 3 HOH A 70 569 569 HOH HOH . 
D 3 HOH A 71 570 570 HOH HOH . 
D 3 HOH A 72 571 571 HOH HOH . 
D 3 HOH A 73 572 572 HOH HOH . 
D 3 HOH A 74 573 573 HOH HOH . 
D 3 HOH A 75 574 574 HOH HOH . 
D 3 HOH A 76 575 575 HOH HOH . 
D 3 HOH A 77 576 576 HOH HOH . 
D 3 HOH A 78 577 577 HOH HOH . 
D 3 HOH A 79 578 578 HOH HOH . 
D 3 HOH A 80 579 579 HOH HOH . 
D 3 HOH A 81 580 580 HOH HOH . 
D 3 HOH A 82 581 581 HOH HOH . 
D 3 HOH A 83 582 582 HOH HOH . 
D 3 HOH A 84 583 583 HOH HOH . 
D 3 HOH A 85 584 584 HOH HOH . 
D 3 HOH A 86 585 585 HOH HOH . 
D 3 HOH A 87 586 586 HOH HOH . 
D 3 HOH A 88 587 587 HOH HOH . 
D 3 HOH A 89 588 588 HOH HOH . 
D 3 HOH A 90 589 589 HOH HOH . 
D 3 HOH A 91 590 590 HOH HOH . 
D 3 HOH A 92 591 591 HOH HOH . 
D 3 HOH A 93 592 592 HOH HOH . 
D 3 HOH A 94 593 593 HOH HOH . 
D 3 HOH A 95 594 594 HOH HOH . 
D 3 HOH A 96 595 595 HOH HOH . 
D 3 HOH A 97 596 596 HOH HOH . 
D 3 HOH A 98 597 597 HOH HOH . 
D 3 HOH A 99 598 598 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA ANP . . . C 2 19.697 51.498 -11.358 1 54.94 ? PA ANP 487 A 1 
HETATM 2 O O1A ANP . . . C 2 18.719 50.333 -11.539 1 53.66 ? O1A ANP 487 A 1 
HETATM 3 O O2A ANP . . . C 2 19.484 52.877 -12.009 1 55.81 ? O2A ANP 487 A 1 
HETATM 4 O O3A ANP . . . C 2 21.068 50.893 -11.922 1 40.51 ? O3A ANP 487 A 1 
HETATM 5 O O5' ANP . . . C 2 20.109 51.786 -9.796 1 52.41 ? O5' ANP 487 A 1 
HETATM 6 C C5' ANP . . . C 2 19.702 52.966 -9.124 1 54.11 ? C5' ANP 487 A 1 
HETATM 7 C C4' ANP . . . C 2 18.221 52.729 -8.878 1 55.8 ? C4' ANP 487 A 1 
HETATM 8 O O4' ANP . . . C 2 17.958 51.495 -8.15 1 57.09 ? O4' ANP 487 A 1 
HETATM 9 C C3' ANP . . . C 2 17.708 53.898 -8.084 1 58.51 ? C3' ANP 487 A 1 
HETATM 10 O O3' ANP . . . C 2 16.655 54.522 -8.838 1 55.27 ? O3' ANP 487 A 1 
HETATM 11 C C2' ANP . . . C 2 17.219 53.272 -6.787 1 54.08 ? C2' ANP 487 A 1 
HETATM 12 O O2' ANP . . . C 2 15.853 53.664 -6.566 1 59.27 ? O2' ANP 487 A 1 
HETATM 13 C C1' ANP . . . C 2 17.443 51.751 -6.84 1 47.02 ? C1' ANP 487 A 1 
HETATM 14 N N9 ANP . . . C 2 18.438 51.402 -5.778 1 29.84 ? N9 ANP 487 A 1 
HETATM 15 C C8 ANP . . . C 2 19.695 50.857 -5.864 1 30.15 ? C8 ANP 487 A 1 
HETATM 16 N N7 ANP . . . C 2 20.258 50.725 -4.591 1 22.2 ? N7 ANP 487 A 1 
HETATM 17 C C5 ANP . . . C 2 19.341 51.198 -3.745 1 23.71 ? C5 ANP 487 A 1 
HETATM 18 C C6 ANP . . . C 2 19.31 51.336 -2.352 1 31.11 ? C6 ANP 487 A 1 
HETATM 19 N N6 ANP . . . C 2 20.388 50.98 -1.597 1 16.37 ? N6 ANP 487 A 1 
HETATM 20 N N1 ANP . . . C 2 18.189 51.873 -1.781 1 27.87 ? N1 ANP 487 A 1 
HETATM 21 C C2 ANP . . . C 2 17.11 52.274 -2.516 1 32.95 ? C2 ANP 487 A 1 
HETATM 22 N N3 ANP . . . C 2 17.101 52.137 -3.874 1 34.65 ? N3 ANP 487 A 1 
HETATM 23 C C4 ANP . . . C 2 18.203 51.616 -4.492 1 28.56 ? C4 ANP 487 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#