data_3O82 # _model_server_result.job_id iMApZC21NEF8B0l0IW_Hyw _model_server_result.datetime_utc '2024-10-19 10:23:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o82 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":544}' # _entry.id 3O82 # _exptl.entry_id 3O82 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O82 _cell.length_a 65.447 _cell.length_b 145.259 _cell.length_c 149.063 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O82 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 A,B,C,D,E,F,G,H,I,J 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLN 55 A GLN 53 1_555 D CA CA . A CA 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc2 A OE2 GLU 60 A GLU 58 1_555 D CA CA . A CA 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc3 A OE1 GLU 60 A GLU 58 1_555 D CA CA . A CA 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.59 ? metalc ? metalc4 A O GLN 307 A GLN 305 1_555 E CA CA . A CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? metalc ? metalc5 A O LEU 309 A LEU 307 1_555 E CA CA . A CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc6 A O ASN 332 A ASN 330 1_555 E CA CA . A CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc7 D CA CA . A CA 543 1_555 I O HOH . A HOH 547 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc8 D CA CA . A CA 543 1_555 I O HOH . A HOH 558 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc9 B O GLN 55 B GLN 53 1_555 G CA CA . B CA 543 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.847 ? metalc ? metalc10 B O GLN 307 B GLN 305 1_555 H CA CA . B CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc11 B O LEU 309 B LEU 307 1_555 H CA CA . B CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? metalc ? metalc12 B O ASN 332 B ASN 330 1_555 H CA CA . B CA 544 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.164 ? metalc ? metalc13 G CA CA . B CA 543 1_555 J O HOH . B HOH 565 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.97 ? metalc ? metalc14 G CA CA . B CA 543 1_555 J O HOH . B HOH 566 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc15 H CA CA . B CA 544 1_555 J O HOH . B HOH 568 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3O82 _atom_sites.fract_transf_matrix[1][1] 0.01528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006884 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006709 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HP8 A 1 601 601 HP8 HP8 . D 3 CA A 1 543 1 CA CA . E 3 CA A 1 544 4 CA CA . F 2 HP8 B 1 602 602 HP8 HP8 . G 3 CA B 1 543 2 CA CA . H 3 CA B 1 544 3 CA CA . I 4 HOH A 1 545 1 HOH HOH . I 4 HOH A 2 546 2 HOH HOH . I 4 HOH A 3 547 3 HOH HOH . I 4 HOH A 4 548 4 HOH HOH . I 4 HOH A 5 549 5 HOH HOH . I 4 HOH A 6 550 6 HOH HOH . I 4 HOH A 7 551 7 HOH HOH . I 4 HOH A 8 552 8 HOH HOH . I 4 HOH A 9 553 9 HOH HOH . I 4 HOH A 10 554 11 HOH HOH . I 4 HOH A 11 555 12 HOH HOH . I 4 HOH A 12 556 13 HOH HOH . I 4 HOH A 13 557 29 HOH HOH . I 4 HOH A 14 558 30 HOH HOH . I 4 HOH A 15 559 31 HOH HOH . I 4 HOH A 16 560 32 HOH HOH . I 4 HOH A 17 561 33 HOH HOH . I 4 HOH A 18 562 34 HOH HOH . I 4 HOH A 19 563 35 HOH HOH . I 4 HOH A 20 564 36 HOH HOH . I 4 HOH A 21 565 37 HOH HOH . I 4 HOH A 22 566 38 HOH HOH . I 4 HOH A 23 567 39 HOH HOH . I 4 HOH A 24 568 40 HOH HOH . I 4 HOH A 25 569 42 HOH HOH . J 4 HOH B 1 545 10 HOH HOH . J 4 HOH B 2 546 14 HOH HOH . J 4 HOH B 3 547 15 HOH HOH . J 4 HOH B 4 548 16 HOH HOH . J 4 HOH B 5 549 17 HOH HOH . J 4 HOH B 6 550 18 HOH HOH . J 4 HOH B 7 551 19 HOH HOH . J 4 HOH B 8 552 20 HOH HOH . J 4 HOH B 9 553 21 HOH HOH . J 4 HOH B 10 554 22 HOH HOH . J 4 HOH B 11 555 23 HOH HOH . J 4 HOH B 12 556 24 HOH HOH . J 4 HOH B 13 557 25 HOH HOH . J 4 HOH B 14 558 26 HOH HOH . J 4 HOH B 15 559 27 HOH HOH . J 4 HOH B 16 560 28 HOH HOH . J 4 HOH B 17 561 41 HOH HOH . J 4 HOH B 18 562 43 HOH HOH . J 4 HOH B 19 563 44 HOH HOH . J 4 HOH B 20 564 45 HOH HOH . J 4 HOH B 21 565 46 HOH HOH . J 4 HOH B 22 566 47 HOH HOH . J 4 HOH B 23 567 48 HOH HOH . J 4 HOH B 24 568 49 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -44.196 _atom_site.Cartn_y -17.294 _atom_site.Cartn_z 4.831 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.31 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 544 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #