data_3O97
#
_model_server_result.job_id            CxPtVbQL6t30mXW6YiBgkQ 
_model_server_result.datetime_utc      '2024-11-07 20:38:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3o97 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":690}' 
#
_entry.id    3O97 
#
_exptl.entry_id    3O97 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              55.845 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE (III) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          107.7 
_cell.angle_gamma         90 
_cell.entry_id            3O97 
_cell.length_a            63.234 
_cell.length_b            50.396 
_cell.length_c            65.893 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3O97 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      6 
_struct_asym.id                             H 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_pdbx_entity_branch.entity_id    2 
_pdbx_entity_branch.type         oligosaccharide 
#
_pdbx_entity_branch_link.link_id                     1 
_pdbx_entity_branch_link.details                     ? 
_pdbx_entity_branch_link.entity_id                   2 
_pdbx_entity_branch_link.entity_branch_list_num_1    2 
_pdbx_entity_branch_link.entity_branch_list_num_2    1 
_pdbx_entity_branch_link.comp_id_1                   NAG 
_pdbx_entity_branch_link.comp_id_2                   NAG 
_pdbx_entity_branch_link.atom_id_1                   C1 
_pdbx_entity_branch_link.leaving_atom_id_1           O1 
_pdbx_entity_branch_link.atom_stereo_config_1        . 
_pdbx_entity_branch_link.atom_id_2                   O4 
_pdbx_entity_branch_link.leaving_atom_id_2           HO4 
_pdbx_entity_branch_link.atom_stereo_config_2        . 
_pdbx_entity_branch_link.value_order                 sing 
#
loop_
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.hetero
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.auth_mon_id
2 n B NAG 1 B 1 NAG A 2 NAG 
2 n B NAG 2 B 2 NAG A 3 NAG 
2 n C NAG 1 C 1 NAG A 5 NAG 
2 n C NAG 2 C 2 NAG A 6 NAG 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 7 A CYS 348 1_555 A SG CYS 39 A CYS 380 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf2 A SG CYS 17 A CYS 358 1_555 A SG CYS 30 A CYS 371 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 A SG CYS 64 A CYS 405 1_555 A SG CYS 343 A CYS 684 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf4 A SG CYS 84 A CYS 425 1_555 A SG CYS 306 A CYS 647 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? 
disulf ? disulf5 A SG CYS 116 A CYS 457 1_555 A SG CYS 191 A CYS 532 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf6 A SG CYS 140 A CYS 481 1_555 A SG CYS 334 A CYS 675 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf7 A SG CYS 150 A CYS 491 1_555 A SG CYS 164 A CYS 505 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf8 A SG CYS 161 A CYS 502 1_555 A SG CYS 174 A CYS 515 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.01 ? 
disulf ? disulf9 A SG CYS 232 A CYS 573 1_555 A SG CYS 246 A CYS 587 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf10 A SG CYS 284 A CYS 625 1_555 A SG CYS 289 A CYS 630 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? 
covale ? covale1 A ND2 ASN 204 A ASN 545 1_555 C C1 NAG . C NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.435 ? 
covale ? covale2 B O4 NAG . B NAG 1 1_555 B C1 NAG . B NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.447 ? 
covale ? covale3 C O4 NAG . C NAG 1 1_555 C C1 NAG . C NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
metalc ? metalc1 F ZN ZN . A ZN 302 1_555 A OE2 GLU 318 A GLU 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
metalc ? metalc2 F ZN ZN . A ZN 302 1_555 A OE1 GLU 318 A GLU 659 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? 
metalc ? metalc3 G ZN ZN . A ZN 303 1_555 A NE2 HIS 247 A HIS 588 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? 
metalc ? metalc4 A OD1 ASP 54 A ASP 395 1_555 H FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? 
metalc ? metalc5 A OH TYR 92 A TYR 433 1_555 H FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
metalc ? metalc6 A OH TYR 185 A TYR 526 1_555 H FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.833 ? 
metalc ? metalc7 A NE2 HIS 254 A HIS 595 1_555 H FE FE . A FE 690 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? 
metalc ? metalc8 H FE FE . A FE 690 1_555 I O1 CO3 . A CO3 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? 
metalc ? metalc9 H FE FE . A FE 690 1_555 I O2 CO3 . A CO3 691 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
#
_chem_comp.formula           'Fe 3' 
_chem_comp.formula_weight    55.845 
_chem_comp.id                FE 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE (III) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3O97 
_atom_sites.fract_transf_matrix[1][1]    0.015814 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005047 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019843 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 3 NAG A 1 1 1 NAG NAG . 
E 4 IAC A 1 1001 1001 IAC IAC . 
F 5 ZN A 1 302 302 ZN ZN . 
G 5 ZN A 1 303 303 ZN ZN . 
H 6 FE A 1 690 690 FE FE . 
I 7 CO3 A 1 691 691 CO3 CO3 . 
J 8 SO4 A 1 301 301 SO4 SO4 . 
K 9 HOH A 1 701 701 HOH HOH . 
K 9 HOH A 2 702 702 HOH HOH . 
K 9 HOH A 3 703 703 HOH HOH . 
K 9 HOH A 4 704 704 HOH HOH . 
K 9 HOH A 5 705 705 HOH HOH . 
K 9 HOH A 6 706 706 HOH HOH . 
K 9 HOH A 7 707 707 HOH HOH . 
K 9 HOH A 8 708 708 HOH HOH . 
K 9 HOH A 9 709 709 HOH HOH . 
K 9 HOH A 10 710 710 HOH HOH . 
K 9 HOH A 11 711 711 HOH HOH . 
K 9 HOH A 12 712 712 HOH HOH . 
K 9 HOH A 13 713 713 HOH HOH . 
K 9 HOH A 14 714 714 HOH HOH . 
K 9 HOH A 15 715 715 HOH HOH . 
K 9 HOH A 16 716 716 HOH HOH . 
K 9 HOH A 17 717 717 HOH HOH . 
K 9 HOH A 18 718 718 HOH HOH . 
K 9 HOH A 19 719 719 HOH HOH . 
K 9 HOH A 20 720 720 HOH HOH . 
K 9 HOH A 21 721 721 HOH HOH . 
K 9 HOH A 22 722 722 HOH HOH . 
K 9 HOH A 23 723 723 HOH HOH . 
K 9 HOH A 24 724 724 HOH HOH . 
K 9 HOH A 25 725 725 HOH HOH . 
K 9 HOH A 26 726 726 HOH HOH . 
K 9 HOH A 27 727 727 HOH HOH . 
K 9 HOH A 28 728 728 HOH HOH . 
K 9 HOH A 29 729 729 HOH HOH . 
K 9 HOH A 30 730 730 HOH HOH . 
K 9 HOH A 31 731 731 HOH HOH . 
K 9 HOH A 32 732 732 HOH HOH . 
K 9 HOH A 33 733 733 HOH HOH . 
K 9 HOH A 34 734 734 HOH HOH . 
K 9 HOH A 35 735 735 HOH HOH . 
K 9 HOH A 36 736 736 HOH HOH . 
K 9 HOH A 37 737 737 HOH HOH . 
K 9 HOH A 38 738 738 HOH HOH . 
K 9 HOH A 39 739 739 HOH HOH . 
K 9 HOH A 40 740 740 HOH HOH . 
K 9 HOH A 41 741 741 HOH HOH . 
K 9 HOH A 42 742 742 HOH HOH . 
K 9 HOH A 43 743 743 HOH HOH . 
K 9 HOH A 44 744 744 HOH HOH . 
K 9 HOH A 45 745 745 HOH HOH . 
K 9 HOH A 46 746 746 HOH HOH . 
K 9 HOH A 47 747 747 HOH HOH . 
K 9 HOH A 48 748 748 HOH HOH . 
K 9 HOH A 49 749 749 HOH HOH . 
K 9 HOH A 50 750 750 HOH HOH . 
K 9 HOH A 51 751 751 HOH HOH . 
K 9 HOH A 52 752 752 HOH HOH . 
K 9 HOH A 53 753 753 HOH HOH . 
K 9 HOH A 54 754 754 HOH HOH . 
K 9 HOH A 55 755 755 HOH HOH . 
K 9 HOH A 56 756 756 HOH HOH . 
K 9 HOH A 57 757 757 HOH HOH . 
K 9 HOH A 58 758 758 HOH HOH . 
K 9 HOH A 59 759 759 HOH HOH . 
K 9 HOH A 60 760 760 HOH HOH . 
K 9 HOH A 61 761 761 HOH HOH . 
K 9 HOH A 62 762 762 HOH HOH . 
K 9 HOH A 63 763 763 HOH HOH . 
K 9 HOH A 64 764 764 HOH HOH . 
K 9 HOH A 65 765 765 HOH HOH . 
K 9 HOH A 66 766 766 HOH HOH . 
K 9 HOH A 67 767 767 HOH HOH . 
K 9 HOH A 68 768 768 HOH HOH . 
K 9 HOH A 69 769 769 HOH HOH . 
K 9 HOH A 70 770 770 HOH HOH . 
K 9 HOH A 71 771 771 HOH HOH . 
K 9 HOH A 72 772 772 HOH HOH . 
K 9 HOH A 73 773 773 HOH HOH . 
K 9 HOH A 74 774 774 HOH HOH . 
K 9 HOH A 75 776 776 HOH HOH . 
K 9 HOH A 76 778 778 HOH HOH . 
K 9 HOH A 77 779 779 HOH HOH . 
K 9 HOH A 78 780 780 HOH HOH . 
K 9 HOH A 79 781 781 HOH HOH . 
K 9 HOH A 80 782 782 HOH HOH . 
K 9 HOH A 81 784 784 HOH HOH . 
K 9 HOH A 82 785 785 HOH HOH . 
K 9 HOH A 83 787 787 HOH HOH . 
K 9 HOH A 84 788 788 HOH HOH . 
K 9 HOH A 85 789 789 HOH HOH . 
K 9 HOH A 86 790 790 HOH HOH . 
K 9 HOH A 87 791 791 HOH HOH . 
K 9 HOH A 88 792 792 HOH HOH . 
K 9 HOH A 89 793 793 HOH HOH . 
K 9 HOH A 90 794 794 HOH HOH . 
K 9 HOH A 91 795 795 HOH HOH . 
K 9 HOH A 92 796 796 HOH HOH . 
K 9 HOH A 93 797 797 HOH HOH . 
K 9 HOH A 94 798 798 HOH HOH . 
K 9 HOH A 95 799 799 HOH HOH . 
K 9 HOH A 96 800 800 HOH HOH . 
K 9 HOH A 97 801 801 HOH HOH . 
K 9 HOH A 98 802 802 HOH HOH . 
K 9 HOH A 99 803 803 HOH HOH . 
K 9 HOH A 100 804 804 HOH HOH . 
K 9 HOH A 101 805 805 HOH HOH . 
K 9 HOH A 102 807 807 HOH HOH . 
K 9 HOH A 103 808 808 HOH HOH . 
K 9 HOH A 104 809 809 HOH HOH . 
K 9 HOH A 105 810 810 HOH HOH . 
K 9 HOH A 106 811 811 HOH HOH . 
K 9 HOH A 107 812 812 HOH HOH . 
K 9 HOH A 108 813 813 HOH HOH . 
K 9 HOH A 109 814 814 HOH HOH . 
K 9 HOH A 110 816 816 HOH HOH . 
K 9 HOH A 111 817 817 HOH HOH . 
K 9 HOH A 112 818 818 HOH HOH . 
K 9 HOH A 113 820 820 HOH HOH . 
K 9 HOH A 114 821 821 HOH HOH . 
K 9 HOH A 115 823 823 HOH HOH . 
K 9 HOH A 116 824 824 HOH HOH . 
K 9 HOH A 117 825 825 HOH HOH . 
K 9 HOH A 118 826 826 HOH HOH . 
K 9 HOH A 119 828 828 HOH HOH . 
K 9 HOH A 120 829 829 HOH HOH . 
K 9 HOH A 121 830 830 HOH HOH . 
K 9 HOH A 122 831 831 HOH HOH . 
K 9 HOH A 123 832 832 HOH HOH . 
K 9 HOH A 124 833 833 HOH HOH . 
K 9 HOH A 125 834 834 HOH HOH . 
K 9 HOH A 126 835 835 HOH HOH . 
K 9 HOH A 127 836 836 HOH HOH . 
K 9 HOH A 128 837 837 HOH HOH . 
K 9 HOH A 129 838 838 HOH HOH . 
K 9 HOH A 130 840 840 HOH HOH . 
K 9 HOH A 131 841 841 HOH HOH . 
K 9 HOH A 132 842 842 HOH HOH . 
K 9 HOH A 133 843 843 HOH HOH . 
K 9 HOH A 134 844 844 HOH HOH . 
K 9 HOH A 135 845 845 HOH HOH . 
K 9 HOH A 136 846 846 HOH HOH . 
K 9 HOH A 137 847 847 HOH HOH . 
K 9 HOH A 138 849 849 HOH HOH . 
K 9 HOH A 139 850 850 HOH HOH . 
K 9 HOH A 140 851 851 HOH HOH . 
K 9 HOH A 141 852 852 HOH HOH . 
K 9 HOH A 142 854 854 HOH HOH . 
K 9 HOH A 143 855 855 HOH HOH . 
K 9 HOH A 144 856 856 HOH HOH . 
K 9 HOH A 145 857 857 HOH HOH . 
K 9 HOH A 146 858 858 HOH HOH . 
K 9 HOH A 147 859 859 HOH HOH . 
K 9 HOH A 148 860 860 HOH HOH . 
K 9 HOH A 149 861 861 HOH HOH . 
K 9 HOH A 150 862 862 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           FE 
_atom_site.label_atom_id         FE 
_atom_site.label_comp_id         FE 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         H 
_atom_site.label_entity_id       6 
_atom_site.Cartn_x               14.424 
_atom_site.Cartn_y               2.542 
_atom_site.Cartn_z               15.114 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        27.16 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          FE 
_atom_site.auth_comp_id          FE 
_atom_site.auth_seq_id           690 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              44 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           293 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           1 
#