data_3O9D # _model_server_result.job_id aUazXx4PcW1thERJIO_uuQ _model_server_result.datetime_utc '2025-02-17 14:27:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o9d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":200}' # _entry.id 3O9D # _exptl.entry_id 3O9D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 603.75 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{(1,3-benzothiazol-6-ylsulfonyl)[(2S)-2-methylbutyl]amino}-1-benzyl-2-hydroxypropyl]carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O9D _cell.length_a 50.708 _cell.length_b 57.6 _cell.length_c 61.718 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O9D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H37 N3 O7 S2' _chem_comp.formula_weight 603.75 _chem_comp.id K19 _chem_comp.mon_nstd_flag . _chem_comp.name '(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl [(1S,2R)-3-{(1,3-benzothiazol-6-ylsulfonyl)[(2S)-2-methylbutyl]amino}-1-benzyl-2-hydroxypropyl]carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 K19 doub 179 n y C1 S1 K19 sing 180 n y N1 C2 K19 sing 181 n y S1 C3 K19 sing 182 n y C2 C3 K19 doub 183 n y C2 C7 K19 sing 184 n y C3 C4 K19 sing 185 n y C4 C5 K19 doub 186 n y C5 C6 K19 sing 187 n y C5 S8 K19 sing 188 n n C6 C7 K19 doub 189 n y S8 O9 K19 doub 190 n n S8 O10 K19 doub 191 n n S8 N11 K19 sing 192 n n N11 C12 K19 sing 193 n n N11 C16 K19 sing 194 n n C12 C13 K19 sing 195 n n C13 C14 K19 sing 196 n n C13 C15 K19 sing 197 n n C15 C18 K19 sing 198 n n C16 C17 K19 sing 199 n n C17 O18 K19 sing 200 n n C17 C19 K19 sing 201 n n C19 N20 K19 sing 202 n n C19 C32 K19 sing 203 n n N20 C21 K19 sing 204 n n C21 O22 K19 doub 205 n n C21 O23 K19 sing 206 n n O23 C24 K19 sing 207 n n C24 C25 K19 sing 208 n n C24 C31 K19 sing 209 n n C25 O26 K19 sing 210 n n O26 C27 K19 sing 211 n n C27 O28 K19 sing 212 n n C27 C31 K19 sing 213 n n O28 C29 K19 sing 214 n n C29 C30 K19 sing 215 n n C30 C31 K19 sing 216 n n C32 C38 K19 sing 217 n n C33 C34 K19 doub 218 n y C33 C38 K19 sing 219 n y C34 C35 K19 sing 220 n y C35 C36 K19 doub 221 n y C36 C37 K19 sing 222 n y C37 C38 K19 doub 223 n y C1 H1 K19 sing 224 n n C4 H4 K19 sing 225 n n C6 H6 K19 sing 226 n n C7 H7 K19 sing 227 n n C12 H12 K19 sing 228 n n C12 H12A K19 sing 229 n n C13 H13 K19 sing 230 n n C14 H14 K19 sing 231 n n C14 H14A K19 sing 232 n n C14 H14B K19 sing 233 n n C15 H15 K19 sing 234 n n C15 H15A K19 sing 235 n n C16 H16 K19 sing 236 n n C16 H16A K19 sing 237 n n C17 H17 K19 sing 238 n n C18 H18 K19 sing 239 n n C18 H18A K19 sing 240 n n C18 H18B K19 sing 241 n n O18 HO18 K19 sing 242 n n C19 H19 K19 sing 243 n n N20 HN20 K19 sing 244 n n C24 H24 K19 sing 245 n n C25 H25 K19 sing 246 n n C25 H25A K19 sing 247 n n C27 H27 K19 sing 248 n n C29 H29 K19 sing 249 n n C29 H29A K19 sing 250 n n C30 H30 K19 sing 251 n n C30 H30A K19 sing 252 n n C31 H31 K19 sing 253 n n C32 H32 K19 sing 254 n n C32 H32A K19 sing 255 n n C33 H33 K19 sing 256 n n C34 H34 K19 sing 257 n n C35 H35 K19 sing 258 n n C36 H36 K19 sing 259 n n C37 H37 K19 sing 260 n n # _atom_sites.entry_id 3O9D _atom_sites.fract_transf_matrix[1][1] 0.019721 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017361 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 100 2 PO4 PO4 . D 3 ACT A 1 101 3 ACT ACT . E 3 ACT A 1 102 4 ACT ACT . F 4 K19 A 1 200 200 K19 K19 . G 2 PO4 B 1 100 1 PO4 PO4 . H 5 HOH A 1 103 1 HOH HOH . H 5 HOH A 2 104 3 HOH HOH . H 5 HOH A 3 105 4 HOH HOH . H 5 HOH A 4 106 5 HOH HOH . H 5 HOH A 5 107 7 HOH HOH . H 5 HOH A 6 108 12 HOH HOH . H 5 HOH A 7 109 13 HOH HOH . H 5 HOH A 8 110 15 HOH HOH . H 5 HOH A 9 111 16 HOH HOH . H 5 HOH A 10 112 17 HOH HOH . H 5 HOH A 11 113 20 HOH HOH . H 5 HOH A 12 114 22 HOH HOH . H 5 HOH A 13 115 23 HOH HOH . H 5 HOH A 14 116 28 HOH HOH . H 5 HOH A 15 117 31 HOH HOH . H 5 HOH A 16 118 36 HOH HOH . H 5 HOH A 17 119 45 HOH HOH . H 5 HOH A 18 120 47 HOH HOH . H 5 HOH A 19 121 48 HOH HOH . H 5 HOH A 20 122 49 HOH HOH . H 5 HOH A 21 123 50 HOH HOH . H 5 HOH A 22 124 51 HOH HOH . H 5 HOH A 23 125 52 HOH HOH . H 5 HOH A 24 126 53 HOH HOH . H 5 HOH A 25 127 54 HOH HOH . H 5 HOH A 26 128 71 HOH HOH . H 5 HOH A 27 129 72 HOH HOH . H 5 HOH A 28 130 73 HOH HOH . H 5 HOH A 29 131 74 HOH HOH . H 5 HOH A 30 132 75 HOH HOH . H 5 HOH A 31 133 76 HOH HOH . H 5 HOH A 32 134 77 HOH HOH . H 5 HOH A 33 135 78 HOH HOH . H 5 HOH A 34 136 79 HOH HOH . H 5 HOH A 35 137 80 HOH HOH . H 5 HOH A 36 138 81 HOH HOH . H 5 HOH A 37 139 82 HOH HOH . H 5 HOH A 38 140 83 HOH HOH . H 5 HOH A 39 141 86 HOH HOH . H 5 HOH A 40 142 87 HOH HOH . H 5 HOH A 41 143 88 HOH HOH . H 5 HOH A 42 144 89 HOH HOH . H 5 HOH A 43 145 90 HOH HOH . H 5 HOH A 44 146 91 HOH HOH . H 5 HOH A 45 147 92 HOH HOH . H 5 HOH A 46 148 93 HOH HOH . H 5 HOH A 47 149 94 HOH HOH . I 5 HOH B 1 101 2 HOH HOH . I 5 HOH B 2 102 6 HOH HOH . I 5 HOH B 3 103 8 HOH HOH . I 5 HOH B 4 104 9 HOH HOH . I 5 HOH B 5 105 10 HOH HOH . I 5 HOH B 6 106 11 HOH HOH . I 5 HOH B 7 107 14 HOH HOH . I 5 HOH B 8 108 18 HOH HOH . I 5 HOH B 9 109 19 HOH HOH . I 5 HOH B 10 110 21 HOH HOH . I 5 HOH B 11 111 24 HOH HOH . I 5 HOH B 12 112 25 HOH HOH . I 5 HOH B 13 113 26 HOH HOH . I 5 HOH B 14 114 27 HOH HOH . I 5 HOH B 15 115 29 HOH HOH . I 5 HOH B 16 116 30 HOH HOH . I 5 HOH B 17 117 32 HOH HOH . I 5 HOH B 18 118 33 HOH HOH . I 5 HOH B 19 119 34 HOH HOH . I 5 HOH B 20 120 35 HOH HOH . I 5 HOH B 21 121 37 HOH HOH . I 5 HOH B 22 122 38 HOH HOH . I 5 HOH B 23 123 39 HOH HOH . I 5 HOH B 24 124 40 HOH HOH . I 5 HOH B 25 125 41 HOH HOH . I 5 HOH B 26 126 42 HOH HOH . I 5 HOH B 27 127 43 HOH HOH . I 5 HOH B 28 128 44 HOH HOH . I 5 HOH B 29 129 46 HOH HOH . I 5 HOH B 30 130 55 HOH HOH . I 5 HOH B 31 131 56 HOH HOH . I 5 HOH B 32 132 57 HOH HOH . I 5 HOH B 33 133 58 HOH HOH . I 5 HOH B 34 134 59 HOH HOH . I 5 HOH B 35 135 60 HOH HOH . I 5 HOH B 36 136 61 HOH HOH . I 5 HOH B 37 137 62 HOH HOH . I 5 HOH B 38 138 63 HOH HOH . I 5 HOH B 39 139 64 HOH HOH . I 5 HOH B 40 140 65 HOH HOH . I 5 HOH B 41 141 66 HOH HOH . I 5 HOH B 42 142 67 HOH HOH . I 5 HOH B 43 143 68 HOH HOH . I 5 HOH B 44 144 69 HOH HOH . I 5 HOH B 45 145 70 HOH HOH . I 5 HOH B 46 146 84 HOH HOH . I 5 HOH B 47 147 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K19 . . . F 4 15.423 36.591 18.504 1 21.49 ? C1 K19 200 A 1 HETATM 2 N N1 K19 . . . F 4 14.965 35.325 18.593 1 21.28 ? N1 K19 200 A 1 HETATM 3 S S1 K19 . . . F 4 16.667 36.845 17.318 1 23.2 ? S1 K19 200 A 1 HETATM 4 C C2 K19 . . . F 4 15.586 34.477 17.709 1 21.01 ? C2 K19 200 A 1 HETATM 5 C C3 K19 . . . F 4 16.551 35.165 16.966 1 20.08 ? C3 K19 200 A 1 HETATM 6 C C4 K19 . . . F 4 17.301 34.447 15.998 1 19.27 ? C4 K19 200 A 1 HETATM 7 C C5 K19 . . . F 4 17.14 33.066 15.756 1 19.93 ? C5 K19 200 A 1 HETATM 8 C C6 K19 . . . F 4 16.158 32.421 16.52 1 19.56 ? C6 K19 200 A 1 HETATM 9 C C7 K19 . . . F 4 15.4 33.119 17.48 1 20.08 ? C7 K19 200 A 1 HETATM 10 S S8 K19 . . . F 4 18.045 32.176 14.71 1 20.4 ? S8 K19 200 A 1 HETATM 11 O O9 K19 . . . F 4 18.581 33.037 13.685 1 20.08 ? O9 K19 200 A 1 HETATM 12 O O10 K19 . . . F 4 17.275 31.092 14.197 1 17.91 ? O10 K19 200 A 1 HETATM 13 N N11 K19 . . . F 4 19.338 31.572 15.478 1 20.49 ? N11 K19 200 A 1 HETATM 14 C C12 K19 . . . F 4 20.085 32.599 16.253 1 22.16 ? C12 K19 200 A 1 HETATM 15 C C13 K19 . . . F 4 21.585 32.313 16.295 1 24.27 ? C13 K19 200 A 1 HETATM 16 C C14 K19 . . . F 4 22.252 32.224 14.921 1 22.33 ? C14 K19 200 A 1 HETATM 17 C C15 K19 . . . F 4 22.279 33.36 17.179 1 25.79 ? C15 K19 200 A 1 HETATM 18 C C16 K19 . . . F 4 19.048 30.353 16.25 1 18.56 ? C16 K19 200 A 1 HETATM 19 C C17 K19 . . . F 4 19.922 29.223 15.706 1 18.94 ? C17 K19 200 A 1 HETATM 20 C C18 K19 . . . F 4 22.148 34.768 16.662 1 26.73 ? C18 K19 200 A 1 HETATM 21 O O18 K19 . . . F 4 19.889 28.094 16.591 1 18.31 ? O18 K19 200 A 1 HETATM 22 C C19 K19 . . . F 4 19.54 28.764 14.306 1 18.37 ? C19 K19 200 A 1 HETATM 23 N N20 K19 . . . F 4 20.641 27.957 13.835 1 17.63 ? N20 K19 200 A 1 HETATM 24 C C21 K19 . . . F 4 21.487 28.309 12.878 1 19.6 ? C21 K19 200 A 1 HETATM 25 O O22 K19 . . . F 4 21.537 29.339 12.223 1 18.26 ? O22 K19 200 A 1 HETATM 26 O O23 K19 . . . F 4 22.443 27.271 12.63 1 21.05 ? O23 K19 200 A 1 HETATM 27 C C24 K19 . . . F 4 23.291 27.39 11.499 1 20.85 ? C24 K19 200 A 1 HETATM 28 C C25 K19 . . . F 4 24.606 26.787 11.96 1 22.48 ? C25 K19 200 A 1 HETATM 29 O O26 K19 . . . F 4 24.388 25.385 11.825 1 21.18 ? O26 K19 200 A 1 HETATM 30 C C27 K19 . . . F 4 23.502 25.141 10.744 1 22.11 ? C27 K19 200 A 1 HETATM 31 O O28 K19 . . . F 4 22.506 24.233 11.172 1 22.19 ? O28 K19 200 A 1 HETATM 32 C C29 K19 . . . F 4 21.221 24.864 11.22 1 21.19 ? C29 K19 200 A 1 HETATM 33 C C30 K19 . . . F 4 21.353 26.112 10.362 1 21.13 ? C30 K19 200 A 1 HETATM 34 C C31 K19 . . . F 4 22.83 26.457 10.399 1 19.94 ? C31 K19 200 A 1 HETATM 35 C C32 K19 . . . F 4 18.254 27.949 14.19 1 18.29 ? C32 K19 200 A 1 HETATM 36 C C33 K19 . . . F 4 17.674 28.544 11.803 1 19.22 ? C33 K19 200 A 1 HETATM 37 C C34 K19 . . . F 4 17.447 28.194 10.472 1 20.87 ? C34 K19 200 A 1 HETATM 38 C C35 K19 . . . F 4 17.527 26.878 10.075 1 20.99 ? C35 K19 200 A 1 HETATM 39 C C36 K19 . . . F 4 17.837 25.896 10.998 1 19.67 ? C36 K19 200 A 1 HETATM 40 C C37 K19 . . . F 4 18.07 26.247 12.317 1 18.2 ? C37 K19 200 A 1 HETATM 41 C C38 K19 . . . F 4 17.994 27.57 12.739 1 17.74 ? C38 K19 200 A 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 41 #