data_3O9H # _model_server_result.job_id r_1ZaKrQd0cHzHB--wg48g _model_server_result.datetime_utc '2024-11-21 22:51:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o9h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":200}' # _entry.id 3O9H # _exptl.entry_id 3O9H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 604.712 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-ethylbutyl)amino]-1-benzyl-2-hydroxypropyl}carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O9H _cell.length_a 50.735 _cell.length_b 57.634 _cell.length_c 61.795 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O9H _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H40 N2 O9 S' _chem_comp.formula_weight 604.712 _chem_comp.id K2E _chem_comp.mon_nstd_flag . _chem_comp.name '(3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-yl {(1S,2R)-3-[(1,3-benzodioxol-5-ylsulfonyl)(2-ethylbutyl)amino]-1-benzyl-2-hydroxypropyl}carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 K2E sing 179 n n C1 O2 K2E sing 180 n n O1 C2 K2E sing 181 n n C2 C3 K2E doub 182 n y C2 C7 K2E sing 183 n y O2 C3 K2E sing 184 n n C3 C4 K2E sing 185 n y C4 C5 K2E doub 186 n y C5 C6 K2E sing 187 n y C5 S8 K2E sing 188 n n C6 C7 K2E doub 189 n y S8 O9 K2E doub 190 n n S8 O10 K2E doub 191 n n S8 N11 K2E sing 192 n n N11 C12 K2E sing 193 n n N11 C16 K2E sing 194 n n C12 C13 K2E sing 195 n n C13 C14 K2E sing 196 n n C13 C15 K2E sing 197 n n C14 C20 K2E sing 198 n n C15 C18 K2E sing 199 n n C16 C17 K2E sing 200 n n C17 O18 K2E sing 201 n n C17 C19 K2E sing 202 n n C19 N20 K2E sing 203 n n C19 C32 K2E sing 204 n n N20 C21 K2E sing 205 n n C21 O22 K2E doub 206 n n C21 O23 K2E sing 207 n n O23 C24 K2E sing 208 n n C24 C25 K2E sing 209 n n C24 C31 K2E sing 210 n n C25 O26 K2E sing 211 n n O26 C27 K2E sing 212 n n C27 O28 K2E sing 213 n n C27 C31 K2E sing 214 n n O28 C29 K2E sing 215 n n C29 C30 K2E sing 216 n n C30 C31 K2E sing 217 n n C32 C38 K2E sing 218 n n C33 C34 K2E doub 219 n y C33 C38 K2E sing 220 n y C34 C35 K2E sing 221 n y C35 C36 K2E doub 222 n y C36 C37 K2E sing 223 n y C37 C38 K2E doub 224 n y C1 H1 K2E sing 225 n n C1 H1A K2E sing 226 n n C4 H4 K2E sing 227 n n C6 H6 K2E sing 228 n n C7 H7 K2E sing 229 n n C12 H12 K2E sing 230 n n C12 H12A K2E sing 231 n n C13 H13 K2E sing 232 n n C14 H14 K2E sing 233 n n C14 H14A K2E sing 234 n n C15 H15 K2E sing 235 n n C15 H15A K2E sing 236 n n C16 H16 K2E sing 237 n n C16 H16A K2E sing 238 n n C17 H17 K2E sing 239 n n C18 H18 K2E sing 240 n n C18 H18A K2E sing 241 n n C18 H18B K2E sing 242 n n O18 HO18 K2E sing 243 n n C19 H19 K2E sing 244 n n C20 H20 K2E sing 245 n n C20 H20A K2E sing 246 n n C20 H20B K2E sing 247 n n N20 HN20 K2E sing 248 n n C24 H24 K2E sing 249 n n C25 H25 K2E sing 250 n n C25 H25A K2E sing 251 n n C27 H27 K2E sing 252 n n C29 H29 K2E sing 253 n n C29 H29A K2E sing 254 n n C30 H30 K2E sing 255 n n C30 H30A K2E sing 256 n n C31 H31 K2E sing 257 n n C32 H32 K2E sing 258 n n C32 H32A K2E sing 259 n n C33 H33 K2E sing 260 n n C34 H34 K2E sing 261 n n C35 H35 K2E sing 262 n n C36 H36 K2E sing 263 n n C37 H37 K2E sing 264 n n # _atom_sites.entry_id 3O9H _atom_sites.fract_transf_matrix[1][1] 0.01971 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017351 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016183 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 100 1 PO4 PO4 . D 2 PO4 A 1 101 2 PO4 PO4 . E 2 PO4 A 1 102 3 PO4 PO4 . F 2 PO4 A 1 103 4 PO4 PO4 . G 3 ACT A 1 104 5 ACT ACT . H 4 K2E B 1 200 200 K2E K2E . I 5 HOH A 1 105 105 HOH HOH . I 5 HOH A 2 106 1 HOH HOH . I 5 HOH A 3 107 3 HOH HOH . I 5 HOH A 4 108 5 HOH HOH . I 5 HOH A 5 109 8 HOH HOH . I 5 HOH A 6 110 11 HOH HOH . I 5 HOH A 7 111 12 HOH HOH . I 5 HOH A 8 112 13 HOH HOH . I 5 HOH A 9 113 14 HOH HOH . I 5 HOH A 10 114 16 HOH HOH . I 5 HOH A 11 115 18 HOH HOH . I 5 HOH A 12 116 116 HOH HOH . I 5 HOH A 13 117 117 HOH HOH . I 5 HOH A 14 118 118 HOH HOH . I 5 HOH A 15 119 119 HOH HOH . I 5 HOH A 16 120 120 HOH HOH . I 5 HOH A 17 121 121 HOH HOH . I 5 HOH A 18 122 122 HOH HOH . I 5 HOH A 19 123 123 HOH HOH . I 5 HOH A 20 124 124 HOH HOH . I 5 HOH A 21 125 125 HOH HOH . I 5 HOH A 22 126 126 HOH HOH . I 5 HOH A 23 127 127 HOH HOH . I 5 HOH A 24 128 128 HOH HOH . I 5 HOH A 25 129 129 HOH HOH . I 5 HOH A 26 130 130 HOH HOH . I 5 HOH A 27 131 131 HOH HOH . I 5 HOH A 28 132 132 HOH HOH . I 5 HOH A 29 133 19 HOH HOH . I 5 HOH A 30 134 134 HOH HOH . I 5 HOH A 31 135 135 HOH HOH . I 5 HOH A 32 136 25 HOH HOH . I 5 HOH A 33 137 137 HOH HOH . I 5 HOH A 34 138 27 HOH HOH . I 5 HOH A 35 139 28 HOH HOH . I 5 HOH A 36 140 140 HOH HOH . I 5 HOH A 37 141 141 HOH HOH . I 5 HOH A 38 142 142 HOH HOH . I 5 HOH A 39 143 143 HOH HOH . I 5 HOH A 40 144 144 HOH HOH . I 5 HOH A 41 145 145 HOH HOH . I 5 HOH A 42 146 146 HOH HOH . I 5 HOH A 43 147 147 HOH HOH . I 5 HOH A 44 148 30 HOH HOH . I 5 HOH A 45 149 31 HOH HOH . I 5 HOH A 46 150 32 HOH HOH . I 5 HOH A 47 151 33 HOH HOH . I 5 HOH A 48 152 36 HOH HOH . I 5 HOH A 49 153 39 HOH HOH . I 5 HOH A 50 154 40 HOH HOH . I 5 HOH A 51 155 155 HOH HOH . I 5 HOH A 52 156 46 HOH HOH . I 5 HOH A 53 157 49 HOH HOH . I 5 HOH A 54 158 50 HOH HOH . I 5 HOH A 55 159 51 HOH HOH . I 5 HOH A 56 160 52 HOH HOH . I 5 HOH A 57 161 53 HOH HOH . I 5 HOH A 58 162 57 HOH HOH . I 5 HOH A 59 163 58 HOH HOH . I 5 HOH A 60 164 59 HOH HOH . I 5 HOH A 61 165 60 HOH HOH . I 5 HOH A 62 166 62 HOH HOH . I 5 HOH A 63 167 63 HOH HOH . I 5 HOH A 64 168 68 HOH HOH . I 5 HOH A 65 169 69 HOH HOH . I 5 HOH A 66 170 70 HOH HOH . I 5 HOH A 67 171 72 HOH HOH . I 5 HOH A 68 172 75 HOH HOH . I 5 HOH A 69 173 76 HOH HOH . I 5 HOH A 70 174 85 HOH HOH . I 5 HOH A 71 175 89 HOH HOH . I 5 HOH A 72 176 90 HOH HOH . I 5 HOH A 73 177 91 HOH HOH . I 5 HOH A 74 178 92 HOH HOH . I 5 HOH A 75 179 93 HOH HOH . I 5 HOH A 76 180 94 HOH HOH . I 5 HOH A 77 181 95 HOH HOH . I 5 HOH A 78 182 96 HOH HOH . I 5 HOH A 79 183 97 HOH HOH . I 5 HOH A 80 184 98 HOH HOH . I 5 HOH A 81 185 99 HOH HOH . I 5 HOH A 82 186 100 HOH HOH . I 5 HOH A 83 187 101 HOH HOH . I 5 HOH A 84 188 102 HOH HOH . I 5 HOH A 85 189 103 HOH HOH . I 5 HOH A 86 190 104 HOH HOH . J 5 HOH B 1 100 2 HOH HOH . J 5 HOH B 2 101 4 HOH HOH . J 5 HOH B 3 102 6 HOH HOH . J 5 HOH B 4 103 7 HOH HOH . J 5 HOH B 5 104 9 HOH HOH . J 5 HOH B 6 105 10 HOH HOH . J 5 HOH B 7 106 106 HOH HOH . J 5 HOH B 8 107 107 HOH HOH . J 5 HOH B 9 108 108 HOH HOH . J 5 HOH B 10 109 109 HOH HOH . J 5 HOH B 11 110 110 HOH HOH . J 5 HOH B 12 111 111 HOH HOH . J 5 HOH B 13 112 112 HOH HOH . J 5 HOH B 14 113 113 HOH HOH . J 5 HOH B 15 114 114 HOH HOH . J 5 HOH B 16 115 115 HOH HOH . J 5 HOH B 17 116 15 HOH HOH . J 5 HOH B 18 117 17 HOH HOH . J 5 HOH B 19 118 20 HOH HOH . J 5 HOH B 20 119 21 HOH HOH . J 5 HOH B 21 120 22 HOH HOH . J 5 HOH B 22 121 23 HOH HOH . J 5 HOH B 23 122 24 HOH HOH . J 5 HOH B 24 123 26 HOH HOH . J 5 HOH B 25 124 29 HOH HOH . J 5 HOH B 26 125 34 HOH HOH . J 5 HOH B 27 126 35 HOH HOH . J 5 HOH B 28 127 37 HOH HOH . J 5 HOH B 29 128 38 HOH HOH . J 5 HOH B 30 129 41 HOH HOH . J 5 HOH B 31 130 42 HOH HOH . J 5 HOH B 32 131 43 HOH HOH . J 5 HOH B 33 132 44 HOH HOH . J 5 HOH B 34 133 133 HOH HOH . J 5 HOH B 35 134 45 HOH HOH . J 5 HOH B 36 135 47 HOH HOH . J 5 HOH B 37 136 136 HOH HOH . J 5 HOH B 38 137 48 HOH HOH . J 5 HOH B 39 138 138 HOH HOH . J 5 HOH B 40 139 139 HOH HOH . J 5 HOH B 41 140 54 HOH HOH . J 5 HOH B 42 141 55 HOH HOH . J 5 HOH B 43 142 56 HOH HOH . J 5 HOH B 44 143 61 HOH HOH . J 5 HOH B 45 144 64 HOH HOH . J 5 HOH B 46 145 65 HOH HOH . J 5 HOH B 47 146 66 HOH HOH . J 5 HOH B 48 147 67 HOH HOH . J 5 HOH B 49 148 148 HOH HOH . J 5 HOH B 50 149 149 HOH HOH . J 5 HOH B 51 150 150 HOH HOH . J 5 HOH B 52 151 151 HOH HOH . J 5 HOH B 53 152 152 HOH HOH . J 5 HOH B 54 153 153 HOH HOH . J 5 HOH B 55 154 154 HOH HOH . J 5 HOH B 56 155 71 HOH HOH . J 5 HOH B 57 156 73 HOH HOH . J 5 HOH B 58 157 74 HOH HOH . J 5 HOH B 59 158 77 HOH HOH . J 5 HOH B 60 159 78 HOH HOH . J 5 HOH B 61 160 79 HOH HOH . J 5 HOH B 62 161 80 HOH HOH . J 5 HOH B 63 162 81 HOH HOH . J 5 HOH B 64 163 82 HOH HOH . J 5 HOH B 65 164 83 HOH HOH . J 5 HOH B 66 165 84 HOH HOH . J 5 HOH B 67 166 86 HOH HOH . J 5 HOH B 68 167 87 HOH HOH . J 5 HOH B 69 168 88 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K2E . . . H 4 15.62 36.717 18.363 1 23.51 ? C1 K2E 200 B 1 HETATM 2 O O1 K2E . . . H 4 14.918 35.457 18.533 1 22.38 ? O1 K2E 200 B 1 HETATM 3 C C2 K2E . . . H 4 15.521 34.55 17.69 1 19.64 ? C2 K2E 200 B 1 HETATM 4 O O2 K2E . . . H 4 16.505 36.526 17.244 1 21.3 ? O2 K2E 200 B 1 HETATM 5 C C3 K2E . . . H 4 16.457 35.19 16.908 1 19.13 ? C3 K2E 200 B 1 HETATM 6 C C4 K2E . . . H 4 17.195 34.502 15.953 1 16.53 ? C4 K2E 200 B 1 HETATM 7 C C5 K2E . . . H 4 17.029 33.116 15.776 1 18.82 ? C5 K2E 200 B 1 HETATM 8 C C6 K2E . . . H 4 16.042 32.488 16.56 1 18.8 ? C6 K2E 200 B 1 HETATM 9 C C7 K2E . . . H 4 15.284 33.198 17.518 1 18.09 ? C7 K2E 200 B 1 HETATM 10 S S8 K2E . . . H 4 17.96 32.297 14.707 1 18.21 ? S8 K2E 200 B 1 HETATM 11 O O9 K2E . . . H 4 17.23 31.165 14.199 1 17.75 ? O9 K2E 200 B 1 HETATM 12 O O10 K2E . . . H 4 18.489 33.168 13.683 1 21.51 ? O10 K2E 200 B 1 HETATM 13 N N11 K2E . . . H 4 19.23 31.689 15.532 1 19.73 ? N11 K2E 200 B 1 HETATM 14 C C12 K2E . . . H 4 19.951 32.691 16.351 1 21.62 ? C12 K2E 200 B 1 HETATM 15 C C13 K2E . . . H 4 21.467 32.475 16.343 1 21.68 ? C13 K2E 200 B 1 HETATM 16 C C14 K2E . . . H 4 22.061 32.617 14.931 1 21.19 ? C14 K2E 200 B 1 HETATM 17 C C15 K2E . . . H 4 22.136 33.437 17.338 1 23.1 ? C15 K2E 200 B 1 HETATM 18 C C16 K2E . . . H 4 18.919 30.461 16.288 1 18.1 ? C16 K2E 200 B 1 HETATM 19 C C17 K2E . . . H 4 19.847 29.373 15.74 1 18.67 ? C17 K2E 200 B 1 HETATM 20 C C18 K2E . . . H 4 21.991 34.9 17.001 1 22.85 ? C18 K2E 200 B 1 HETATM 21 O O18 K2E . . . H 4 19.923 28.271 16.643 1 19.3 ? O18 K2E 200 B 1 HETATM 22 C C19 K2E . . . H 4 19.486 28.902 14.334 1 19.37 ? C19 K2E 200 B 1 HETATM 23 C C20 K2E . . . H 4 23.46 32.06 14.837 1 22.24 ? C20 K2E 200 B 1 HETATM 24 N N20 K2E . . . H 4 20.583 28.105 13.845 1 18.71 ? N20 K2E 200 B 1 HETATM 25 C C21 K2E . . . H 4 21.477 28.446 12.931 1 19.21 ? C21 K2E 200 B 1 HETATM 26 O O22 K2E . . . H 4 21.627 29.493 12.33 1 17.94 ? O22 K2E 200 B 1 HETATM 27 O O23 K2E . . . H 4 22.393 27.374 12.644 1 19.63 ? O23 K2E 200 B 1 HETATM 28 C C24 K2E . . . H 4 23.265 27.521 11.528 1 19.19 ? C24 K2E 200 B 1 HETATM 29 C C25 K2E . . . H 4 24.585 26.928 12 1 19.07 ? C25 K2E 200 B 1 HETATM 30 O O26 K2E . . . H 4 24.395 25.522 11.87 1 20.45 ? O26 K2E 200 B 1 HETATM 31 C C27 K2E . . . H 4 23.509 25.25 10.789 1 23.34 ? C27 K2E 200 B 1 HETATM 32 O O28 K2E . . . H 4 22.512 24.305 11.198 1 22.86 ? O28 K2E 200 B 1 HETATM 33 C C29 K2E . . . H 4 21.26 24.976 11.335 1 21.56 ? C29 K2E 200 B 1 HETATM 34 C C30 K2E . . . H 4 21.356 26.19 10.41 1 21.49 ? C30 K2E 200 B 1 HETATM 35 C C31 K2E . . . H 4 22.833 26.564 10.44 1 21.37 ? C31 K2E 200 B 1 HETATM 36 C C32 K2E . . . H 4 18.202 28.061 14.243 1 19.78 ? C32 K2E 200 B 1 HETATM 37 C C33 K2E . . . H 4 18.134 26.353 12.38 1 18.77 ? C33 K2E 200 B 1 HETATM 38 C C34 K2E . . . H 4 17.931 25.986 11.053 1 21.09 ? C34 K2E 200 B 1 HETATM 39 C C35 K2E . . . H 4 17.528 26.938 10.129 1 21.39 ? C35 K2E 200 B 1 HETATM 40 C C36 K2E . . . H 4 17.333 28.248 10.526 1 22.24 ? C36 K2E 200 B 1 HETATM 41 C C37 K2E . . . H 4 17.541 28.617 11.858 1 20.23 ? C37 K2E 200 B 1 HETATM 42 C C38 K2E . . . H 4 17.953 27.673 12.794 1 20.38 ? C38 K2E 200 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 42 #