data_3O9T # _model_server_result.job_id 1BgXl9XIjC0HRybjcS4Qew _model_server_result.datetime_utc '2024-12-21 18:33:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3o9t # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":5928}' # _entry.id 3O9T # _exptl.entry_id 3O9T _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.331 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'HEXAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3O9T _cell.length_a 72.396 _cell.length_b 114.874 _cell.length_c 106.417 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3O9T _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H26 O7' _chem_comp.formula_weight 282.331 _chem_comp.id P6G _chem_comp.mon_nstd_flag . _chem_comp.name 'HEXAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'POLYETHYLENE GLYCOL PEG400' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 P6G sing 237 n n O1 H1 P6G sing 238 n n C2 C3 P6G sing 239 n n C2 H21 P6G sing 240 n n C2 H22 P6G sing 241 n n C3 O4 P6G sing 242 n n C3 H31 P6G sing 243 n n C3 H32 P6G sing 244 n n O4 C5 P6G sing 245 n n C5 C6 P6G sing 246 n n C5 H51 P6G sing 247 n n C5 H52 P6G sing 248 n n C6 O7 P6G sing 249 n n C6 H61 P6G sing 250 n n C6 H62 P6G sing 251 n n O7 C8 P6G sing 252 n n C8 C9 P6G sing 253 n n C8 H81 P6G sing 254 n n C8 H82 P6G sing 255 n n C9 O10 P6G sing 256 n n C9 H91 P6G sing 257 n n C9 H92 P6G sing 258 n n O10 C11 P6G sing 259 n n C11 C12 P6G sing 260 n n C11 H111 P6G sing 261 n n C11 H112 P6G sing 262 n n C12 O13 P6G sing 263 n n C12 H121 P6G sing 264 n n C12 H122 P6G sing 265 n n O13 C14 P6G sing 266 n n C14 C15 P6G sing 267 n n C14 H141 P6G sing 268 n n C14 H142 P6G sing 269 n n C15 O16 P6G sing 270 n n C15 H151 P6G sing 271 n n C15 H152 P6G sing 272 n n O16 C17 P6G sing 273 n n C17 C18 P6G sing 274 n n C17 H171 P6G sing 275 n n C17 H172 P6G sing 276 n n C18 O19 P6G sing 277 n n C18 H181 P6G sing 278 n n C18 H182 P6G sing 279 n n O19 H19 P6G sing 280 n n # _atom_sites.entry_id 3O9T _atom_sites.fract_transf_matrix[1][1] 0.013813 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008705 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 P6G A 1 5928 5928 P6G P2K . D 3 HOH A 1 3 3 HOH HOH . D 3 HOH A 2 4 4 HOH HOH . D 3 HOH A 3 5 5 HOH HOH . D 3 HOH A 4 6 6 HOH HOH . D 3 HOH A 5 7 7 HOH HOH . D 3 HOH A 6 8 8 HOH HOH . D 3 HOH A 7 10 10 HOH HOH . D 3 HOH A 8 12 12 HOH HOH . D 3 HOH A 9 15 15 HOH HOH . D 3 HOH A 10 17 17 HOH HOH . D 3 HOH A 11 18 18 HOH HOH . D 3 HOH A 12 19 19 HOH HOH . D 3 HOH A 13 20 20 HOH HOH . D 3 HOH A 14 21 21 HOH HOH . D 3 HOH A 15 22 22 HOH HOH . D 3 HOH A 16 23 23 HOH HOH . D 3 HOH A 17 24 24 HOH HOH . D 3 HOH A 18 25 25 HOH HOH . D 3 HOH A 19 27 27 HOH HOH . D 3 HOH A 20 28 28 HOH HOH . D 3 HOH A 21 29 29 HOH HOH . D 3 HOH A 22 32 32 HOH HOH . D 3 HOH A 23 33 33 HOH HOH . D 3 HOH A 24 34 34 HOH HOH . D 3 HOH A 25 35 35 HOH HOH . D 3 HOH A 26 38 38 HOH HOH . D 3 HOH A 27 39 39 HOH HOH . D 3 HOH A 28 41 41 HOH HOH . D 3 HOH A 29 42 42 HOH HOH . D 3 HOH A 30 43 43 HOH HOH . D 3 HOH A 31 44 44 HOH HOH . D 3 HOH A 32 45 45 HOH HOH . D 3 HOH A 33 54 54 HOH HOH . D 3 HOH A 34 55 55 HOH HOH . D 3 HOH A 35 57 57 HOH HOH . D 3 HOH A 36 58 58 HOH HOH . D 3 HOH A 37 59 59 HOH HOH . D 3 HOH A 38 61 61 HOH HOH . D 3 HOH A 39 62 62 HOH HOH . D 3 HOH A 40 64 64 HOH HOH . D 3 HOH A 41 65 65 HOH HOH . D 3 HOH A 42 67 67 HOH HOH . D 3 HOH A 43 69 69 HOH HOH . D 3 HOH A 44 70 70 HOH HOH . D 3 HOH A 45 72 72 HOH HOH . D 3 HOH A 46 73 73 HOH HOH . D 3 HOH A 47 74 74 HOH HOH . D 3 HOH A 48 78 78 HOH HOH . D 3 HOH A 49 231 80 HOH HOH . D 3 HOH A 50 232 81 HOH HOH . D 3 HOH A 51 233 82 HOH HOH . D 3 HOH A 52 234 83 HOH HOH . D 3 HOH A 53 235 85 HOH HOH . D 3 HOH A 54 236 86 HOH HOH . D 3 HOH A 55 237 88 HOH HOH . D 3 HOH A 56 238 89 HOH HOH . D 3 HOH A 57 239 90 HOH HOH . D 3 HOH A 58 240 91 HOH HOH . D 3 HOH A 59 241 93 HOH HOH . D 3 HOH A 60 242 94 HOH HOH . D 3 HOH A 61 243 95 HOH HOH . D 3 HOH A 62 244 99 HOH HOH . D 3 HOH A 63 245 100 HOH HOH . D 3 HOH A 64 246 105 HOH HOH . D 3 HOH A 65 247 107 HOH HOH . D 3 HOH A 66 248 109 HOH HOH . D 3 HOH A 67 249 110 HOH HOH . D 3 HOH A 68 250 113 HOH HOH . D 3 HOH A 69 251 115 HOH HOH . D 3 HOH A 70 252 117 HOH HOH . D 3 HOH A 71 253 118 HOH HOH . D 3 HOH A 72 254 119 HOH HOH . D 3 HOH A 73 255 120 HOH HOH . D 3 HOH A 74 256 121 HOH HOH . D 3 HOH A 75 257 122 HOH HOH . D 3 HOH A 76 258 124 HOH HOH . D 3 HOH A 77 259 125 HOH HOH . D 3 HOH A 78 260 130 HOH HOH . D 3 HOH A 79 261 131 HOH HOH . D 3 HOH A 80 262 132 HOH HOH . D 3 HOH A 81 263 133 HOH HOH . D 3 HOH A 82 264 134 HOH HOH . D 3 HOH A 83 265 135 HOH HOH . D 3 HOH A 84 266 136 HOH HOH . D 3 HOH A 85 267 137 HOH HOH . D 3 HOH A 86 268 139 HOH HOH . E 3 HOH B 1 1 1 HOH HOH . E 3 HOH B 2 9 9 HOH HOH . E 3 HOH B 3 11 11 HOH HOH . E 3 HOH B 4 13 13 HOH HOH . E 3 HOH B 5 14 14 HOH HOH . E 3 HOH B 6 36 36 HOH HOH . E 3 HOH B 7 37 37 HOH HOH . E 3 HOH B 8 40 40 HOH HOH . E 3 HOH B 9 47 47 HOH HOH . E 3 HOH B 10 48 48 HOH HOH . E 3 HOH B 11 49 49 HOH HOH . E 3 HOH B 12 51 51 HOH HOH . E 3 HOH B 13 52 52 HOH HOH . E 3 HOH B 14 53 53 HOH HOH . E 3 HOH B 15 56 56 HOH HOH . E 3 HOH B 16 60 60 HOH HOH . E 3 HOH B 17 63 63 HOH HOH . E 3 HOH B 18 66 66 HOH HOH . E 3 HOH B 19 68 68 HOH HOH . E 3 HOH B 20 71 71 HOH HOH . E 3 HOH B 21 76 76 HOH HOH . E 3 HOH B 22 77 77 HOH HOH . E 3 HOH B 23 231 79 HOH HOH . E 3 HOH B 24 232 84 HOH HOH . E 3 HOH B 25 233 87 HOH HOH . E 3 HOH B 26 234 96 HOH HOH . E 3 HOH B 27 235 97 HOH HOH . E 3 HOH B 28 236 98 HOH HOH . E 3 HOH B 29 237 102 HOH HOH . E 3 HOH B 30 238 103 HOH HOH . E 3 HOH B 31 239 104 HOH HOH . E 3 HOH B 32 240 106 HOH HOH . E 3 HOH B 33 241 108 HOH HOH . E 3 HOH B 34 242 111 HOH HOH . E 3 HOH B 35 243 112 HOH HOH . E 3 HOH B 36 244 114 HOH HOH . E 3 HOH B 37 245 116 HOH HOH . E 3 HOH B 38 246 123 HOH HOH . E 3 HOH B 39 247 126 HOH HOH . E 3 HOH B 40 248 127 HOH HOH . E 3 HOH B 41 249 128 HOH HOH . E 3 HOH B 42 250 129 HOH HOH . E 3 HOH B 43 251 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O4 P6G . . . C 2 2.458 -11.219 -27.383 0.5 42.87 ? O4 P6G 5928 A 1 HETATM 2 C C5 P6G . . . C 2 2.589 -10.504 -28.624 0.5 39.62 ? C5 P6G 5928 A 1 HETATM 3 C C6 P6G . . . C 2 3.066 -9.114 -28.308 0.5 38.23 ? C6 P6G 5928 A 1 HETATM 4 O O7 P6G . . . C 2 1.956 -8.169 -28.361 0.5 37.95 ? O7 P6G 5928 A 1 HETATM 5 C C8 P6G . . . C 2 1.87 -7.467 -27.136 0.5 31.84 ? C8 P6G 5928 A 1 HETATM 6 C C9 P6G . . . C 2 0.709 -6.543 -27.086 0.5 32.99 ? C9 P6G 5928 A 1 HETATM 7 O O10 P6G . . . C 2 -0.464 -7.266 -26.854 0.5 35.31 ? O10 P6G 5928 A 1 HETATM 8 C C11 P6G . . . C 2 -1.228 -6.653 -25.887 0.5 36.02 ? C11 P6G 5928 A 1 HETATM 9 C C12 P6G . . . C 2 -1.778 -7.739 -25.07 0.5 39.51 ? C12 P6G 5928 A 1 HETATM 10 O O13 P6G . . . C 2 -2.954 -8.319 -25.631 0.5 44.14 ? O13 P6G 5928 A 1 HETATM 11 C C14 P6G . . . C 2 -2.901 -9.741 -25.301 0.5 43.97 ? C14 P6G 5928 A 1 HETATM 12 C C15 P6G . . . C 2 -1.725 -9.967 -24.341 0.5 46 ? C15 P6G 5928 A 1 HETATM 13 O O16 P6G . . . C 2 -1.675 -11.297 -23.735 0.5 47.53 ? O16 P6G 5928 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #