data_3OA4
#
_model_server_result.job_id            KFqImG-PAzyLgCmPbJyIRA 
_model_server_result.datetime_utc      '2024-12-27 01:00:14' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oa4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    3OA4 
#
_exptl.entry_id    3OA4 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OA4 
_cell.length_a            63.264 
_cell.length_b            63.264 
_cell.length_c            90.855 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OA4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -45.4275 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 11 A HIS 11 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.999 ? 
metalc ? metalc2 A OE1 GLU 58 A GLU 58 1_555 B ZN ZN . A ZN 300 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.422 ? 
metalc ? metalc3 A NE2 HIS 82 A HIS 82 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc4 A OE2 GLU 132 A GLU 132 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
metalc ? metalc5 E O HOH . A HOH 192 1_555 B ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.592 ? 
metalc ? metalc6 B ZN ZN . A ZN 300 1_555 D O1 GOL . A GOL 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     3OA4 
_atom_sites.fract_transf_matrix[1][1]    0.015807 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015807 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011007 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 300 300 ZN ZN . 
C 3 SO4 A 1 301 301 SO4 SO4 . 
D 4 GOL A 1 302 302 GOL GOL . 
E 5 HOH A 1 162 1 HOH HOH . 
E 5 HOH A 2 163 2 HOH HOH . 
E 5 HOH A 3 164 4 HOH HOH . 
E 5 HOH A 4 165 5 HOH HOH . 
E 5 HOH A 5 166 6 HOH HOH . 
E 5 HOH A 6 167 7 HOH HOH . 
E 5 HOH A 7 168 10 HOH HOH . 
E 5 HOH A 8 169 11 HOH HOH . 
E 5 HOH A 9 170 12 HOH HOH . 
E 5 HOH A 10 171 13 HOH HOH . 
E 5 HOH A 11 172 14 HOH HOH . 
E 5 HOH A 12 173 15 HOH HOH . 
E 5 HOH A 13 174 16 HOH HOH . 
E 5 HOH A 14 175 17 HOH HOH . 
E 5 HOH A 15 176 22 HOH HOH . 
E 5 HOH A 16 177 25 HOH HOH . 
E 5 HOH A 17 178 27 HOH HOH . 
E 5 HOH A 18 179 29 HOH HOH . 
E 5 HOH A 19 180 30 HOH HOH . 
E 5 HOH A 20 181 31 HOH HOH . 
E 5 HOH A 21 182 32 HOH HOH . 
E 5 HOH A 22 183 33 HOH HOH . 
E 5 HOH A 23 184 34 HOH HOH . 
E 5 HOH A 24 185 35 HOH HOH . 
E 5 HOH A 25 186 36 HOH HOH . 
E 5 HOH A 26 187 38 HOH HOH . 
E 5 HOH A 27 188 40 HOH HOH . 
E 5 HOH A 28 189 45 HOH HOH . 
E 5 HOH A 29 190 46 HOH HOH . 
E 5 HOH A 30 191 49 HOH HOH . 
E 5 HOH A 31 192 54 HOH HOH . 
E 5 HOH A 32 193 55 HOH HOH . 
E 5 HOH A 33 194 56 HOH HOH . 
E 5 HOH A 34 195 57 HOH HOH . 
E 5 HOH A 35 196 59 HOH HOH . 
E 5 HOH A 36 197 61 HOH HOH . 
E 5 HOH A 37 198 62 HOH HOH . 
E 5 HOH A 38 199 63 HOH HOH . 
E 5 HOH A 39 200 64 HOH HOH . 
E 5 HOH A 40 201 65 HOH HOH . 
E 5 HOH A 41 202 66 HOH HOH . 
E 5 HOH A 42 203 67 HOH HOH . 
E 5 HOH A 43 204 71 HOH HOH . 
E 5 HOH A 44 205 72 HOH HOH . 
E 5 HOH A 45 206 74 HOH HOH . 
E 5 HOH A 46 207 75 HOH HOH . 
E 5 HOH A 47 208 80 HOH HOH . 
E 5 HOH A 48 209 81 HOH HOH . 
E 5 HOH A 49 210 85 HOH HOH . 
E 5 HOH A 50 211 87 HOH HOH . 
E 5 HOH A 51 212 88 HOH HOH . 
E 5 HOH A 52 213 89 HOH HOH . 
E 5 HOH A 53 214 90 HOH HOH . 
E 5 HOH A 54 215 91 HOH HOH . 
E 5 HOH A 55 216 92 HOH HOH . 
E 5 HOH A 56 217 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 4 20.455 -7.732 -13.168 0.7 63.93 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . D 4 19.184 -7.753 -12.56 0.7 53.9 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . D 4 21.506 -8.333 -12.238 0.7 55.45 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . D 4 21.174 -8.001 -10.911 0.7 65.34 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . D 4 21.542 -9.848 -12.394 0.7 64.39 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . D 4 22.792 -10.331 -11.963 0.7 56.57 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           430 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           6 
#