data_3OAD
#
_model_server_result.job_id            91e3E1QVpAMce1J9PKuLYg 
_model_server_result.datetime_utc      '2024-12-21 16:16:58' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oad 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":166}' 
#
_entry.id    3OAD 
#
_exptl.entry_id    3OAD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OAD 
_cell.length_a            66.666 
_cell.length_b            93.405 
_cell.length_c            118.271 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OAD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,I,J 1 1 
C,D,G,H,K,L 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 51 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf2 B SG CYS 47 B CYS 217 1_555 B SG CYS 51 B CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf3 B SG CYS 89 B CYS 259 1_555 B SG CYS 126 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf4 C SG CYS 51 C CYS 51 1_555 C SG CYS 58 C CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf5 D SG CYS 47 D CYS 217 1_555 D SG CYS 51 D CYS 221 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf6 D SG CYS 89 D CYS 259 1_555 D SG CYS 126 D CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
covale ? covale1 A ND2 ASN 75 A ASN 75 1_555 E C1 NAG . A NAG 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? 
covale ? covale2 C ND2 ASN 5 C ASN 5 1_555 G C1 NAG . C NAG 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.45 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 323 n n 
C1 O1 NAG sing 324 n n 
C1 O5 NAG sing 325 n n 
C1 H1 NAG sing 326 n n 
C2 C3 NAG sing 327 n n 
C2 N2 NAG sing 328 n n 
C2 H2 NAG sing 329 n n 
C3 C4 NAG sing 330 n n 
C3 O3 NAG sing 331 n n 
C3 H3 NAG sing 332 n n 
C4 C5 NAG sing 333 n n 
C4 O4 NAG sing 334 n n 
C4 H4 NAG sing 335 n n 
C5 C6 NAG sing 336 n n 
C5 O5 NAG sing 337 n n 
C5 H5 NAG sing 338 n n 
C6 O6 NAG sing 339 n n 
C6 H61 NAG sing 340 n n 
C6 H62 NAG sing 341 n n 
C7 C8 NAG sing 342 n n 
C7 N2 NAG sing 343 n n 
C7 O7 NAG doub 344 n n 
C8 H81 NAG sing 345 n n 
C8 H82 NAG sing 346 n n 
C8 H83 NAG sing 347 n n 
N2 HN2 NAG sing 348 n n 
O1 HO1 NAG sing 349 n n 
O3 HO3 NAG sing 350 n n 
O4 HO4 NAG sing 351 n n 
O6 HO6 NAG sing 352 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3OAD 
_atom_sites.fract_transf_matrix[1][1]    0.015 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010706 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008455 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 NAG A 1 166 2 NAG NAG . 
F 4 LPO A 1 167 1 LPO LPO . 
G 3 NAG C 1 166 2 NAG NAG . 
H 4 LPO C 1 167 1 LPO LPO . 
I 5 HOH A 1 168 2 HOH HOH . 
I 5 HOH A 2 169 3 HOH HOH . 
I 5 HOH A 3 170 4 HOH HOH . 
I 5 HOH A 4 171 9 HOH HOH . 
I 5 HOH A 5 172 11 HOH HOH . 
I 5 HOH A 6 173 12 HOH HOH . 
I 5 HOH A 7 174 16 HOH HOH . 
I 5 HOH A 8 175 18 HOH HOH . 
I 5 HOH A 9 176 20 HOH HOH . 
I 5 HOH A 10 177 23 HOH HOH . 
I 5 HOH A 11 178 24 HOH HOH . 
I 5 HOH A 12 179 26 HOH HOH . 
I 5 HOH A 13 180 33 HOH HOH . 
I 5 HOH A 14 181 36 HOH HOH . 
I 5 HOH A 15 182 40 HOH HOH . 
I 5 HOH A 16 183 46 HOH HOH . 
I 5 HOH A 17 184 51 HOH HOH . 
I 5 HOH A 18 185 52 HOH HOH . 
I 5 HOH A 19 186 56 HOH HOH . 
I 5 HOH A 20 187 70 HOH HOH . 
I 5 HOH A 21 188 71 HOH HOH . 
I 5 HOH A 22 189 77 HOH HOH . 
I 5 HOH A 23 190 81 HOH HOH . 
I 5 HOH A 24 191 85 HOH HOH . 
I 5 HOH A 25 192 89 HOH HOH . 
I 5 HOH A 26 193 91 HOH HOH . 
I 5 HOH A 27 194 98 HOH HOH . 
I 5 HOH A 28 195 105 HOH HOH . 
I 5 HOH A 29 196 108 HOH HOH . 
I 5 HOH A 30 197 118 HOH HOH . 
I 5 HOH A 31 198 123 HOH HOH . 
I 5 HOH A 32 199 129 HOH HOH . 
I 5 HOH A 33 200 133 HOH HOH . 
I 5 HOH A 34 201 143 HOH HOH . 
I 5 HOH A 35 202 147 HOH HOH . 
J 5 HOH B 1 6 6 HOH HOH . 
J 5 HOH B 2 10 10 HOH HOH . 
J 5 HOH B 3 21 21 HOH HOH . 
J 5 HOH B 4 27 27 HOH HOH . 
J 5 HOH B 5 28 28 HOH HOH . 
J 5 HOH B 6 31 31 HOH HOH . 
J 5 HOH B 7 39 39 HOH HOH . 
J 5 HOH B 8 44 44 HOH HOH . 
J 5 HOH B 9 45 45 HOH HOH . 
J 5 HOH B 10 49 49 HOH HOH . 
J 5 HOH B 11 57 57 HOH HOH . 
J 5 HOH B 12 73 73 HOH HOH . 
J 5 HOH B 13 74 74 HOH HOH . 
J 5 HOH B 14 76 76 HOH HOH . 
J 5 HOH B 15 80 80 HOH HOH . 
J 5 HOH B 16 82 82 HOH HOH . 
J 5 HOH B 17 83 83 HOH HOH . 
J 5 HOH B 18 84 84 HOH HOH . 
J 5 HOH B 19 87 87 HOH HOH . 
J 5 HOH B 20 92 92 HOH HOH . 
J 5 HOH B 21 94 94 HOH HOH . 
J 5 HOH B 22 97 97 HOH HOH . 
J 5 HOH B 23 102 102 HOH HOH . 
J 5 HOH B 24 115 115 HOH HOH . 
J 5 HOH B 25 116 116 HOH HOH . 
J 5 HOH B 26 119 119 HOH HOH . 
J 5 HOH B 27 120 120 HOH HOH . 
J 5 HOH B 28 121 121 HOH HOH . 
J 5 HOH B 29 122 122 HOH HOH . 
J 5 HOH B 30 124 124 HOH HOH . 
J 5 HOH B 31 126 126 HOH HOH . 
J 5 HOH B 32 132 132 HOH HOH . 
J 5 HOH B 33 136 136 HOH HOH . 
J 5 HOH B 34 137 137 HOH HOH . 
J 5 HOH B 35 140 140 HOH HOH . 
J 5 HOH B 36 141 141 HOH HOH . 
J 5 HOH B 37 149 149 HOH HOH . 
K 5 HOH C 1 168 1 HOH HOH . 
K 5 HOH C 2 169 7 HOH HOH . 
K 5 HOH C 3 170 8 HOH HOH . 
K 5 HOH C 4 171 17 HOH HOH . 
K 5 HOH C 5 172 19 HOH HOH . 
K 5 HOH C 6 173 22 HOH HOH . 
K 5 HOH C 7 174 30 HOH HOH . 
K 5 HOH C 8 175 32 HOH HOH . 
K 5 HOH C 9 176 35 HOH HOH . 
K 5 HOH C 10 177 37 HOH HOH . 
K 5 HOH C 11 178 38 HOH HOH . 
K 5 HOH C 12 179 41 HOH HOH . 
K 5 HOH C 13 180 42 HOH HOH . 
K 5 HOH C 14 181 48 HOH HOH . 
K 5 HOH C 15 182 54 HOH HOH . 
K 5 HOH C 16 183 58 HOH HOH . 
K 5 HOH C 17 184 60 HOH HOH . 
K 5 HOH C 18 185 64 HOH HOH . 
K 5 HOH C 19 186 65 HOH HOH . 
K 5 HOH C 20 187 78 HOH HOH . 
K 5 HOH C 21 188 79 HOH HOH . 
K 5 HOH C 22 189 93 HOH HOH . 
K 5 HOH C 23 190 99 HOH HOH . 
K 5 HOH C 24 191 101 HOH HOH . 
K 5 HOH C 25 192 103 HOH HOH . 
K 5 HOH C 26 193 106 HOH HOH . 
K 5 HOH C 27 194 110 HOH HOH . 
K 5 HOH C 28 195 112 HOH HOH . 
K 5 HOH C 29 196 117 HOH HOH . 
K 5 HOH C 30 197 127 HOH HOH . 
K 5 HOH C 31 198 128 HOH HOH . 
K 5 HOH C 32 199 131 HOH HOH . 
K 5 HOH C 33 200 135 HOH HOH . 
K 5 HOH C 34 201 142 HOH HOH . 
K 5 HOH C 35 202 144 HOH HOH . 
K 5 HOH C 36 203 151 HOH HOH . 
K 5 HOH C 37 204 155 HOH HOH . 
L 5 HOH D 1 5 5 HOH HOH . 
L 5 HOH D 2 13 13 HOH HOH . 
L 5 HOH D 3 14 14 HOH HOH . 
L 5 HOH D 4 15 15 HOH HOH . 
L 5 HOH D 5 25 25 HOH HOH . 
L 5 HOH D 6 29 29 HOH HOH . 
L 5 HOH D 7 43 43 HOH HOH . 
L 5 HOH D 8 47 47 HOH HOH . 
L 5 HOH D 9 50 50 HOH HOH . 
L 5 HOH D 10 53 53 HOH HOH . 
L 5 HOH D 11 55 55 HOH HOH . 
L 5 HOH D 12 59 59 HOH HOH . 
L 5 HOH D 13 61 61 HOH HOH . 
L 5 HOH D 14 62 62 HOH HOH . 
L 5 HOH D 15 63 63 HOH HOH . 
L 5 HOH D 16 66 66 HOH HOH . 
L 5 HOH D 17 67 67 HOH HOH . 
L 5 HOH D 18 68 68 HOH HOH . 
L 5 HOH D 19 69 69 HOH HOH . 
L 5 HOH D 20 88 88 HOH HOH . 
L 5 HOH D 21 90 90 HOH HOH . 
L 5 HOH D 22 96 96 HOH HOH . 
L 5 HOH D 23 100 100 HOH HOH . 
L 5 HOH D 24 104 104 HOH HOH . 
L 5 HOH D 25 109 109 HOH HOH . 
L 5 HOH D 26 111 111 HOH HOH . 
L 5 HOH D 27 113 113 HOH HOH . 
L 5 HOH D 28 114 114 HOH HOH . 
L 5 HOH D 29 130 130 HOH HOH . 
L 5 HOH D 30 134 134 HOH HOH . 
L 5 HOH D 31 139 139 HOH HOH . 
L 5 HOH D 32 148 148 HOH HOH . 
L 5 HOH D 33 150 150 HOH HOH . 
L 5 HOH D 34 152 152 HOH HOH . 
L 5 HOH D 35 153 153 HOH HOH . 
L 5 HOH D 36 154 154 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . G 3 47.152 7.78 -42.718 1 76.53 ? C1 NAG 166 C 1 
HETATM 2 C C2 NAG . . . G 3 46.837 7.728 -44.213 1 81.13 ? C2 NAG 166 C 1 
HETATM 3 C C3 NAG . . . G 3 45.439 7.171 -44.473 1 82.43 ? C3 NAG 166 C 1 
HETATM 4 C C4 NAG . . . G 3 45.335 5.79 -43.824 1 82.22 ? C4 NAG 166 C 1 
HETATM 5 C C5 NAG . . . G 3 45.602 5.981 -42.326 1 81.35 ? C5 NAG 166 C 1 
HETATM 6 C C6 NAG . . . G 3 45.432 4.687 -41.537 1 82.18 ? C6 NAG 166 C 1 
HETATM 7 C C7 NAG . . . G 3 47.783 9.223 -45.851 1 85.06 ? C7 NAG 166 C 1 
HETATM 8 C C8 NAG . . . G 3 47.747 10.588 -46.486 1 86.05 ? C8 NAG 166 C 1 
HETATM 9 N N2 NAG . . . G 3 46.972 9.042 -44.808 1 82.85 ? N2 NAG 166 C 1 
HETATM 10 O O3 NAG . . . G 3 45.178 7.132 -45.864 1 83.97 ? O3 NAG 166 C 1 
HETATM 11 O O4 NAG . . . G 3 44.061 5.217 -44.046 1 82.8 ? O4 NAG 166 C 1 
HETATM 12 O O5 NAG . . . G 3 46.903 6.519 -42.103 1 79.1 ? O5 NAG 166 C 1 
HETATM 13 O O6 NAG . . . G 3 44.805 4.992 -40.307 1 83.34 ? O6 NAG 166 C 1 
HETATM 14 O O7 NAG . . . G 3 48.526 8.331 -46.292 1 85.22 ? O7 NAG 166 C 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           296 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#