data_3OB7 # _model_server_result.job_id BJiB04Zbpw578hLe54ILWA _model_server_result.datetime_utc '2024-11-23 21:37:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ob7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":365}' # _entry.id 3OB7 # _exptl.entry_id 3OB7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.75 _cell.angle_gamma 90 _cell.entry_id 3OB7 _cell.length_a 201.798 _cell.length_b 123.106 _cell.length_c 99.928 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OB7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,K,L 1 1 C,H,M 2 1,2 D,E,I,J,N,O 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -43.413246 0 90.004974 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 J N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 195 _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 195 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id SG2 _struct_conn.ptnr2_label_comp_id GSH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id GSH _struct_conn.ptnr2_auth_seq_id 314 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.96 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 296 n n P O2 PO4 sing 297 n n P O3 PO4 sing 298 n n P O4 PO4 sing 299 n n # _atom_sites.entry_id 3OB7 _atom_sites.fract_transf_matrix[1][1] 0.004955 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00239 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 GSH A 1 581 581 GSH GSH . G 3 PO4 A 1 365 365 PO4 PO4 . H 3 PO4 C 1 365 365 PO4 PO4 . I 2 GSH D 1 314 195 GSH GSH . J 3 PO4 E 1 366 366 PO4 PO4 . K 4 HOH A 1 314 3 HOH HOH . K 4 HOH A 2 315 4 HOH HOH . K 4 HOH A 3 316 8 HOH HOH . K 4 HOH A 4 317 14 HOH HOH . K 4 HOH A 5 318 15 HOH HOH . K 4 HOH A 6 319 25 HOH HOH . K 4 HOH A 7 320 27 HOH HOH . K 4 HOH A 8 321 29 HOH HOH . K 4 HOH A 9 322 30 HOH HOH . K 4 HOH A 10 323 35 HOH HOH . K 4 HOH A 11 324 51 HOH HOH . K 4 HOH A 12 325 57 HOH HOH . K 4 HOH A 13 326 63 HOH HOH . K 4 HOH A 14 327 69 HOH HOH . K 4 HOH A 15 328 72 HOH HOH . K 4 HOH A 16 329 77 HOH HOH . L 4 HOH B 1 314 1 HOH HOH . L 4 HOH B 2 315 2 HOH HOH . L 4 HOH B 3 316 6 HOH HOH . L 4 HOH B 4 317 7 HOH HOH . L 4 HOH B 5 318 9 HOH HOH . L 4 HOH B 6 319 13 HOH HOH . L 4 HOH B 7 320 28 HOH HOH . L 4 HOH B 8 321 33 HOH HOH . L 4 HOH B 9 322 34 HOH HOH . L 4 HOH B 10 323 38 HOH HOH . L 4 HOH B 11 324 53 HOH HOH . L 4 HOH B 12 326 81 HOH HOH . M 4 HOH C 1 314 10 HOH HOH . M 4 HOH C 2 315 11 HOH HOH . M 4 HOH C 3 316 17 HOH HOH . M 4 HOH C 4 317 20 HOH HOH . M 4 HOH C 5 318 23 HOH HOH . M 4 HOH C 6 319 24 HOH HOH . M 4 HOH C 7 320 32 HOH HOH . M 4 HOH C 8 321 36 HOH HOH . M 4 HOH C 9 322 52 HOH HOH . M 4 HOH C 10 323 55 HOH HOH . M 4 HOH C 11 324 56 HOH HOH . M 4 HOH C 12 325 79 HOH HOH . N 4 HOH D 1 315 37 HOH HOH . N 4 HOH D 2 316 41 HOH HOH . N 4 HOH D 3 317 42 HOH HOH . N 4 HOH D 4 318 43 HOH HOH . N 4 HOH D 5 319 46 HOH HOH . N 4 HOH D 6 320 54 HOH HOH . N 4 HOH D 7 321 73 HOH HOH . N 4 HOH D 8 322 74 HOH HOH . O 4 HOH E 1 314 18 HOH HOH . O 4 HOH E 2 315 19 HOH HOH . O 4 HOH E 3 316 21 HOH HOH . O 4 HOH E 4 317 22 HOH HOH . O 4 HOH E 5 318 26 HOH HOH . O 4 HOH E 6 319 31 HOH HOH . O 4 HOH E 7 320 39 HOH HOH . O 4 HOH E 8 321 44 HOH HOH . O 4 HOH E 9 322 48 HOH HOH . O 4 HOH E 10 323 50 HOH HOH . O 4 HOH E 11 324 64 HOH HOH . O 4 HOH E 12 325 65 HOH HOH . O 4 HOH E 13 326 71 HOH HOH . O 4 HOH E 14 327 75 HOH HOH . O 4 HOH E 15 328 82 HOH HOH . O 4 HOH E 16 329 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . H 3 -13.405 -74.318 31.24 1 119.39 ? P PO4 365 C 1 HETATM 2 O O1 PO4 . . . H 3 -12.9 -73.916 29.897 1 120.63 ? O1 PO4 365 C 1 HETATM 3 O O2 PO4 . . . H 3 -14.697 -75.023 31.088 1 122.7 ? O2 PO4 365 C 1 HETATM 4 O O3 PO4 . . . H 3 -13.601 -73.108 32.075 1 120.66 ? O3 PO4 365 C 1 HETATM 5 O O4 PO4 . . . H 3 -12.423 -75.223 31.896 1 118.78 ? O4 PO4 365 C 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 291 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #