data_3OB7 # _model_server_result.job_id YnUBhoPm_SmduPJapP6wMg _model_server_result.datetime_utc '2024-11-23 21:53:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ob7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":581}' # _entry.id 3OB7 # _exptl.entry_id 3OB7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 307.323 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLUTATHIONE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.75 _cell.angle_gamma 90 _cell.entry_id 3OB7 _cell.length_a 201.798 _cell.length_b 123.106 _cell.length_c 99.928 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OB7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,K,L 1 1 C,H,M 2 1,2 D,E,I,J,N,O 3 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_556 -x,y,-z+1 -1 0 0 0 1 0 0 0 -1 -43.413246 0 90.004974 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 I N N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id D _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 195 _struct_conn.ptnr1_auth_asym_id D _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 195 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id I _struct_conn.ptnr2_label_atom_id SG2 _struct_conn.ptnr2_label_comp_id GSH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id D _struct_conn.ptnr2_auth_comp_id GSH _struct_conn.ptnr2_auth_seq_id 314 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.96 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C10 H17 N3 O6 S' _chem_comp.formula_weight 307.323 _chem_comp.id GSH _chem_comp.mon_nstd_flag . _chem_comp.name GLUTATHIONE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 CA1 GSH sing 129 n n N1 HN11 GSH sing 130 n n N1 HN12 GSH sing 131 n n CA1 C1 GSH sing 132 n n CA1 CB1 GSH sing 133 n n CA1 HA1 GSH sing 134 n n C1 O11 GSH doub 135 n n C1 O12 GSH sing 136 n n O12 H12 GSH sing 137 n n CB1 CG1 GSH sing 138 n n CB1 HB12 GSH sing 139 n n CB1 HB13 GSH sing 140 n n CG1 CD1 GSH sing 141 n n CG1 HG12 GSH sing 142 n n CG1 HG13 GSH sing 143 n n CD1 OE1 GSH doub 144 n n CD1 N2 GSH sing 145 n n N2 CA2 GSH sing 146 n n N2 HN2 GSH sing 147 n n CA2 C2 GSH sing 148 n n CA2 CB2 GSH sing 149 n n CA2 HA2 GSH sing 150 n n C2 O2 GSH doub 151 n n C2 N3 GSH sing 152 n n CB2 SG2 GSH sing 153 n n CB2 HB22 GSH sing 154 n n CB2 HB23 GSH sing 155 n n SG2 HSG GSH sing 156 n n N3 CA3 GSH sing 157 n n N3 HN3 GSH sing 158 n n CA3 C3 GSH sing 159 n n CA3 HA31 GSH sing 160 n n CA3 HA32 GSH sing 161 n n C3 O31 GSH doub 162 n n C3 O32 GSH sing 163 n n O32 H32 GSH sing 164 n n # _atom_sites.entry_id 3OB7 _atom_sites.fract_transf_matrix[1][1] 0.004955 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00239 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008123 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 GSH A 1 581 581 GSH GSH . G 3 PO4 A 1 365 365 PO4 PO4 . H 3 PO4 C 1 365 365 PO4 PO4 . I 2 GSH D 1 314 195 GSH GSH . J 3 PO4 E 1 366 366 PO4 PO4 . K 4 HOH A 1 314 3 HOH HOH . K 4 HOH A 2 315 4 HOH HOH . K 4 HOH A 3 316 8 HOH HOH . K 4 HOH A 4 317 14 HOH HOH . K 4 HOH A 5 318 15 HOH HOH . K 4 HOH A 6 319 25 HOH HOH . K 4 HOH A 7 320 27 HOH HOH . K 4 HOH A 8 321 29 HOH HOH . K 4 HOH A 9 322 30 HOH HOH . K 4 HOH A 10 323 35 HOH HOH . K 4 HOH A 11 324 51 HOH HOH . K 4 HOH A 12 325 57 HOH HOH . K 4 HOH A 13 326 63 HOH HOH . K 4 HOH A 14 327 69 HOH HOH . K 4 HOH A 15 328 72 HOH HOH . K 4 HOH A 16 329 77 HOH HOH . L 4 HOH B 1 314 1 HOH HOH . L 4 HOH B 2 315 2 HOH HOH . L 4 HOH B 3 316 6 HOH HOH . L 4 HOH B 4 317 7 HOH HOH . L 4 HOH B 5 318 9 HOH HOH . L 4 HOH B 6 319 13 HOH HOH . L 4 HOH B 7 320 28 HOH HOH . L 4 HOH B 8 321 33 HOH HOH . L 4 HOH B 9 322 34 HOH HOH . L 4 HOH B 10 323 38 HOH HOH . L 4 HOH B 11 324 53 HOH HOH . L 4 HOH B 12 326 81 HOH HOH . M 4 HOH C 1 314 10 HOH HOH . M 4 HOH C 2 315 11 HOH HOH . M 4 HOH C 3 316 17 HOH HOH . M 4 HOH C 4 317 20 HOH HOH . M 4 HOH C 5 318 23 HOH HOH . M 4 HOH C 6 319 24 HOH HOH . M 4 HOH C 7 320 32 HOH HOH . M 4 HOH C 8 321 36 HOH HOH . M 4 HOH C 9 322 52 HOH HOH . M 4 HOH C 10 323 55 HOH HOH . M 4 HOH C 11 324 56 HOH HOH . M 4 HOH C 12 325 79 HOH HOH . N 4 HOH D 1 315 37 HOH HOH . N 4 HOH D 2 316 41 HOH HOH . N 4 HOH D 3 317 42 HOH HOH . N 4 HOH D 4 318 43 HOH HOH . N 4 HOH D 5 319 46 HOH HOH . N 4 HOH D 6 320 54 HOH HOH . N 4 HOH D 7 321 73 HOH HOH . N 4 HOH D 8 322 74 HOH HOH . O 4 HOH E 1 314 18 HOH HOH . O 4 HOH E 2 315 19 HOH HOH . O 4 HOH E 3 316 21 HOH HOH . O 4 HOH E 4 317 22 HOH HOH . O 4 HOH E 5 318 26 HOH HOH . O 4 HOH E 6 319 31 HOH HOH . O 4 HOH E 7 320 39 HOH HOH . O 4 HOH E 8 321 44 HOH HOH . O 4 HOH E 9 322 48 HOH HOH . O 4 HOH E 10 323 50 HOH HOH . O 4 HOH E 11 324 64 HOH HOH . O 4 HOH E 12 325 65 HOH HOH . O 4 HOH E 13 326 71 HOH HOH . O 4 HOH E 14 327 75 HOH HOH . O 4 HOH E 15 328 82 HOH HOH . O 4 HOH E 16 329 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 GSH . . . F 2 20.168 -6.748 103.81 1 57.63 ? N1 GSH 581 A 1 HETATM 2 C CA1 GSH . . . F 2 21.032 -5.701 104.361 1 56.42 ? CA1 GSH 581 A 1 HETATM 3 C C1 GSH . . . F 2 20.156 -4.54 104.565 1 46.49 ? C1 GSH 581 A 1 HETATM 4 O O11 GSH . . . F 2 19.838 -4.233 105.662 1 48.33 ? O11 GSH 581 A 1 HETATM 5 O O12 GSH . . . F 2 19.704 -3.899 103.508 1 47.69 ? O12 GSH 581 A 1 HETATM 6 C CB1 GSH . . . F 2 22.139 -5.38 103.352 1 74.86 ? CB1 GSH 581 A 1 HETATM 7 C CG1 GSH . . . F 2 22.989 -6.642 103.15 1 93.54 ? CG1 GSH 581 A 1 HETATM 8 C CD1 GSH . . . F 2 24.064 -6.5 102.074 1 106.3 ? CD1 GSH 581 A 1 HETATM 9 O OE1 GSH . . . F 2 24.23 -5.454 101.438 1 106.39 ? OE1 GSH 581 A 1 HETATM 10 N N2 GSH . . . F 2 24.733 -7.643 101.854 1 118.54 ? N2 GSH 581 A 1 HETATM 11 C CA2 GSH . . . F 2 25.746 -7.859 100.789 1 129.45 ? CA2 GSH 581 A 1 HETATM 12 C C2 GSH . . . F 2 24.917 -8.552 99.692 1 133.95 ? C2 GSH 581 A 1 HETATM 13 O O2 GSH . . . F 2 23.733 -8.752 99.907 1 135.06 ? O2 GSH 581 A 1 HETATM 14 C CB2 GSH . . . F 2 26.805 -8.845 101.333 1 131.53 ? CB2 GSH 581 A 1 HETATM 15 S SG2 GSH . . . F 2 27.849 -8.099 102.628 1 127.96 ? SG2 GSH 581 A 1 HETATM 16 N N3 GSH . . . F 2 25.403 -8.973 98.505 1 139.64 ? N3 GSH 581 A 1 HETATM 17 C CA3 GSH . . . F 2 24.553 -9.65 97.488 1 147.89 ? CA3 GSH 581 A 1 HETATM 18 C C3 GSH . . . F 2 25.308 -10.055 96.252 1 152.07 ? C3 GSH 581 A 1 HETATM 19 O O31 GSH . . . F 2 26.529 -9.806 96.178 1 154.94 ? O31 GSH 581 A 1 HETATM 20 O O32 GSH . . . F 2 24.673 -10.637 95.339 1 153.76 ? O32 GSH 581 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 351 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #