data_3OC0
#
_model_server_result.job_id            dAkS_YKWbhL9W3cMMd4ZNQ 
_model_server_result.datetime_utc      '2024-11-15 11:42:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oc0 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":793}' 
#
_entry.id    3OC0 
#
_exptl.entry_id    3OC0 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OC0 
_cell.length_a            65.561 
_cell.length_b            68.487 
_cell.length_c            421.411 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OC0 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 290 A CYS 328 1_555 A SG CYS 301 A CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? 
disulf ? disulf2 A SG CYS 347 A CYS 385 1_555 A SG CYS 356 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
disulf ? disulf3 A SG CYS 406 A CYS 444 1_555 A SG CYS 409 A CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 A SG CYS 416 A CYS 454 1_555 A SG CYS 434 A CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
disulf ? disulf5 A SG CYS 611 A CYS 649 1_555 A SG CYS 724 A CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf6 B SG CYS 290 B CYS 328 1_555 B SG CYS 301 B CYS 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? 
disulf ? disulf7 B SG CYS 347 B CYS 385 1_555 B SG CYS 356 B CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf8 B SG CYS 406 B CYS 444 1_555 B SG CYS 409 B CYS 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? 
disulf ? disulf9 B SG CYS 416 B CYS 454 1_555 B SG CYS 434 B CYS 472 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf10 B SG CYS 611 B CYS 649 1_555 B SG CYS 724 B CYS 762 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? 
covale ? covale1 A ND2 ASN 47 A ASN 85 1_555 D C1 NAG . A NAG 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.426 ? 
covale ? covale2 A ND2 ASN 112 A ASN 150 1_555 C C1 NAG . A NAG 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
covale ? covale3 A ND2 ASN 191 A ASN 229 1_555 F C1 NAG . A NAG 796 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.429 ? 
covale ? covale4 A ND2 ASN 243 A ASN 281 1_555 E C1 NAG . A NAG 795 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.432 ? 
covale ? covale5 B ND2 ASN 47 B ASN 85 1_555 I C1 NAG . B NAG 794 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.434 ? 
covale ? covale6 B ND2 ASN 54 B ASN 92 1_555 K C1 NAG . B NAG 797 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? 
covale ? covale7 B ND2 ASN 112 B ASN 150 1_555 H C1 NAG . B NAG 793 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.443 ? 
covale ? covale8 B ND2 ASN 191 B ASN 229 1_555 J C1 NAG . B NAG 796 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3OC0 
_atom_sites.fract_transf_matrix[1][1]    0.015253 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002373 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAG A 1 793 793 NAG NAG . 
D 2 NAG A 1 794 794 NAG NAG . 
E 2 NAG A 1 795 795 NAG NAG . 
F 2 NAG A 1 796 796 NAG NAG . 
G 3 B2Q A 1 900 900 B2Q B2Q . 
H 2 NAG B 1 793 793 NAG NAG . 
I 2 NAG B 1 794 794 NAG NAG . 
J 2 NAG B 1 796 796 NAG NAG . 
K 2 NAG B 1 797 797 NAG NAG . 
L 3 B2Q B 1 900 900 B2Q B2Q . 
M 4 HOH A 1 12 12 HOH HOH . 
M 4 HOH A 2 13 13 HOH HOH . 
M 4 HOH A 3 14 14 HOH HOH . 
M 4 HOH A 4 15 15 HOH HOH . 
M 4 HOH A 5 16 16 HOH HOH . 
M 4 HOH A 6 17 17 HOH HOH . 
M 4 HOH A 7 18 18 HOH HOH . 
M 4 HOH A 8 19 19 HOH HOH . 
M 4 HOH A 9 20 20 HOH HOH . 
M 4 HOH A 10 21 21 HOH HOH . 
M 4 HOH A 11 22 22 HOH HOH . 
M 4 HOH A 12 34 34 HOH HOH . 
M 4 HOH A 13 36 36 HOH HOH . 
M 4 HOH A 14 37 37 HOH HOH . 
M 4 HOH A 15 38 38 HOH HOH . 
M 4 HOH A 16 767 767 HOH HOH . 
M 4 HOH A 17 768 768 HOH HOH . 
M 4 HOH A 18 769 769 HOH HOH . 
M 4 HOH A 19 770 770 HOH HOH . 
M 4 HOH A 20 771 771 HOH HOH . 
M 4 HOH A 21 772 772 HOH HOH . 
M 4 HOH A 22 773 773 HOH HOH . 
M 4 HOH A 23 774 774 HOH HOH . 
M 4 HOH A 24 775 775 HOH HOH . 
M 4 HOH A 25 776 776 HOH HOH . 
M 4 HOH A 26 777 777 HOH HOH . 
M 4 HOH A 27 778 778 HOH HOH . 
M 4 HOH A 28 779 779 HOH HOH . 
M 4 HOH A 29 780 780 HOH HOH . 
M 4 HOH A 30 781 781 HOH HOH . 
M 4 HOH A 31 782 782 HOH HOH . 
M 4 HOH A 32 783 783 HOH HOH . 
M 4 HOH A 33 784 784 HOH HOH . 
M 4 HOH A 34 785 785 HOH HOH . 
M 4 HOH A 35 786 786 HOH HOH . 
M 4 HOH A 36 787 787 HOH HOH . 
M 4 HOH A 37 788 788 HOH HOH . 
M 4 HOH A 38 789 789 HOH HOH . 
M 4 HOH A 39 790 790 HOH HOH . 
M 4 HOH A 40 791 791 HOH HOH . 
M 4 HOH A 41 792 792 HOH HOH . 
N 4 HOH B 1 1 1 HOH HOH . 
N 4 HOH B 2 2 2 HOH HOH . 
N 4 HOH B 3 3 3 HOH HOH . 
N 4 HOH B 4 4 4 HOH HOH . 
N 4 HOH B 5 5 5 HOH HOH . 
N 4 HOH B 6 6 6 HOH HOH . 
N 4 HOH B 7 7 7 HOH HOH . 
N 4 HOH B 8 8 8 HOH HOH . 
N 4 HOH B 9 9 9 HOH HOH . 
N 4 HOH B 10 10 10 HOH HOH . 
N 4 HOH B 11 11 11 HOH HOH . 
N 4 HOH B 12 23 23 HOH HOH . 
N 4 HOH B 13 24 24 HOH HOH . 
N 4 HOH B 14 25 25 HOH HOH . 
N 4 HOH B 15 26 26 HOH HOH . 
N 4 HOH B 16 27 27 HOH HOH . 
N 4 HOH B 17 28 28 HOH HOH . 
N 4 HOH B 18 29 29 HOH HOH . 
N 4 HOH B 19 30 30 HOH HOH . 
N 4 HOH B 20 31 31 HOH HOH . 
N 4 HOH B 21 32 32 HOH HOH . 
N 4 HOH B 22 33 33 HOH HOH . 
N 4 HOH B 23 35 35 HOH HOH . 
N 4 HOH B 24 767 767 HOH HOH . 
N 4 HOH B 25 768 768 HOH HOH . 
N 4 HOH B 26 769 769 HOH HOH . 
N 4 HOH B 27 770 770 HOH HOH . 
N 4 HOH B 28 771 771 HOH HOH . 
N 4 HOH B 29 772 772 HOH HOH . 
N 4 HOH B 30 773 773 HOH HOH . 
N 4 HOH B 31 774 774 HOH HOH . 
N 4 HOH B 32 775 775 HOH HOH . 
N 4 HOH B 33 776 776 HOH HOH . 
N 4 HOH B 34 777 777 HOH HOH . 
N 4 HOH B 35 778 778 HOH HOH . 
N 4 HOH B 36 779 779 HOH HOH . 
N 4 HOH B 37 780 780 HOH HOH . 
N 4 HOH B 38 781 781 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . C 2 52.275 84.607 26.753 1 71.07 ? C1 NAG 793 A 1 
HETATM 2 C C2 NAG . . . C 2 51.685 85.926 26.256 1 73.52 ? C2 NAG 793 A 1 
HETATM 3 C C3 NAG . . . C 2 52.656 86.629 25.305 1 73.77 ? C3 NAG 793 A 1 
HETATM 4 C C4 NAG . . . C 2 53.983 86.802 26.015 1 73.82 ? C4 NAG 793 A 1 
HETATM 5 C C5 NAG . . . C 2 54.457 85.567 26.784 1 72.87 ? C5 NAG 793 A 1 
HETATM 6 C C6 NAG . . . C 2 55.367 86.012 27.913 1 72.77 ? C6 NAG 793 A 1 
HETATM 7 C C7 NAG . . . C 2 49.993 85.033 24.749 1 75.7 ? C7 NAG 793 A 1 
HETATM 8 C C8 NAG . . . C 2 51.091 84.493 23.864 1 76.7 ? C8 NAG 793 A 1 
HETATM 9 N N2 NAG . . . C 2 50.311 85.779 25.799 1 73.86 ? N2 NAG 793 A 1 
HETATM 10 O O3 NAG . . . C 2 52.204 87.901 24.887 1 75.45 ? O3 NAG 793 A 1 
HETATM 11 O O4 NAG . . . C 2 54.933 87.17 25.037 1 74.02 ? O4 NAG 793 A 1 
HETATM 12 O O5 NAG . . . C 2 53.445 84.881 27.47 1 71.91 ? O5 NAG 793 A 1 
HETATM 13 O O6 NAG . . . C 2 54.522 86.303 29 1 71.91 ? O6 NAG 793 A 1 
HETATM 14 O O7 NAG . . . C 2 48.825 84.778 24.491 1 76.65 ? O7 NAG 793 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           281 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#