data_3OCV # _model_server_result.job_id Xw8K4DUjNJzmbf1BA-_7mg _model_server_result.datetime_utc '2024-11-28 14:39:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ocv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":264}' # _entry.id 3OCV # _exptl.entry_id 3OCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3OCV _cell.length_a 97.885 _cell.length_b 97.885 _cell.length_c 107.084 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 x-y,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 64 A ASP 64 1_555 C MG MG . A MG 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? metalc ? metalc2 A O ASN 66 A ASN 66 1_555 C MG MG . A MG 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.149 ? metalc ? metalc3 A OD1 ASP 181 A ASP 181 1_555 C MG MG . A MG 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc4 B O2P AMP . A AMP 263 1_555 C MG MG . A MG 264 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc5 C MG MG . A MG 264 1_555 D O HOH . A HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? metalc ? metalc6 C MG MG . A MG 264 1_555 D O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OCV _atom_sites.fract_transf_matrix[1][1] 0.010216 _atom_sites.fract_transf_matrix[1][2] 0.005898 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011797 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009338 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 AMP A 1 263 1 AMP AMP . C 3 MG A 1 264 1 MG MG . D 4 HOH A 1 265 265 HOH HOH . D 4 HOH A 2 266 266 HOH HOH . D 4 HOH A 3 267 267 HOH HOH . D 4 HOH A 4 268 268 HOH HOH . D 4 HOH A 5 269 269 HOH HOH . D 4 HOH A 6 270 270 HOH HOH . D 4 HOH A 7 271 271 HOH HOH . D 4 HOH A 8 272 272 HOH HOH . D 4 HOH A 9 273 273 HOH HOH . D 4 HOH A 10 274 274 HOH HOH . D 4 HOH A 11 275 275 HOH HOH . D 4 HOH A 12 276 276 HOH HOH . D 4 HOH A 13 277 277 HOH HOH . D 4 HOH A 14 278 278 HOH HOH . D 4 HOH A 15 279 279 HOH HOH . D 4 HOH A 16 280 280 HOH HOH . D 4 HOH A 17 281 1 HOH HOH . D 4 HOH A 18 282 2 HOH HOH . D 4 HOH A 19 283 3 HOH HOH . D 4 HOH A 20 284 4 HOH HOH . D 4 HOH A 21 285 5 HOH HOH . D 4 HOH A 22 286 6 HOH HOH . D 4 HOH A 23 287 7 HOH HOH . D 4 HOH A 24 288 8 HOH HOH . D 4 HOH A 25 289 9 HOH HOH . D 4 HOH A 26 290 10 HOH HOH . D 4 HOH A 27 291 11 HOH HOH . D 4 HOH A 28 292 12 HOH HOH . D 4 HOH A 29 293 13 HOH HOH . D 4 HOH A 30 294 14 HOH HOH . D 4 HOH A 31 295 15 HOH HOH . D 4 HOH A 32 296 16 HOH HOH . D 4 HOH A 33 297 17 HOH HOH . D 4 HOH A 34 298 18 HOH HOH . D 4 HOH A 35 299 19 HOH HOH . D 4 HOH A 36 300 20 HOH HOH . D 4 HOH A 37 301 21 HOH HOH . D 4 HOH A 38 302 22 HOH HOH . D 4 HOH A 39 303 23 HOH HOH . D 4 HOH A 40 304 24 HOH HOH . D 4 HOH A 41 305 25 HOH HOH . D 4 HOH A 42 306 26 HOH HOH . D 4 HOH A 43 307 27 HOH HOH . D 4 HOH A 44 308 28 HOH HOH . D 4 HOH A 45 309 29 HOH HOH . D 4 HOH A 46 310 30 HOH HOH . D 4 HOH A 47 311 31 HOH HOH . D 4 HOH A 48 312 32 HOH HOH . D 4 HOH A 49 313 33 HOH HOH . D 4 HOH A 50 314 34 HOH HOH . D 4 HOH A 51 315 35 HOH HOH . D 4 HOH A 52 316 36 HOH HOH . D 4 HOH A 53 317 37 HOH HOH . D 4 HOH A 54 318 38 HOH HOH . D 4 HOH A 55 319 39 HOH HOH . D 4 HOH A 56 320 40 HOH HOH . D 4 HOH A 57 321 41 HOH HOH . D 4 HOH A 58 322 42 HOH HOH . D 4 HOH A 59 323 43 HOH HOH . D 4 HOH A 60 324 44 HOH HOH . D 4 HOH A 61 325 45 HOH HOH . D 4 HOH A 62 326 46 HOH HOH . D 4 HOH A 63 327 47 HOH HOH . D 4 HOH A 64 328 48 HOH HOH . D 4 HOH A 65 329 49 HOH HOH . D 4 HOH A 66 330 50 HOH HOH . D 4 HOH A 67 331 51 HOH HOH . D 4 HOH A 68 332 52 HOH HOH . D 4 HOH A 69 333 53 HOH HOH . D 4 HOH A 70 334 54 HOH HOH . D 4 HOH A 71 335 55 HOH HOH . D 4 HOH A 72 336 56 HOH HOH . D 4 HOH A 73 337 57 HOH HOH . D 4 HOH A 74 338 58 HOH HOH . D 4 HOH A 75 339 59 HOH HOH . D 4 HOH A 76 340 60 HOH HOH . D 4 HOH A 77 341 61 HOH HOH . D 4 HOH A 78 342 62 HOH HOH . D 4 HOH A 79 343 63 HOH HOH . D 4 HOH A 80 344 64 HOH HOH . D 4 HOH A 81 345 65 HOH HOH . D 4 HOH A 82 346 66 HOH HOH . D 4 HOH A 83 347 67 HOH HOH . D 4 HOH A 84 348 68 HOH HOH . D 4 HOH A 85 349 69 HOH HOH . D 4 HOH A 86 350 70 HOH HOH . D 4 HOH A 87 351 71 HOH HOH . D 4 HOH A 88 352 72 HOH HOH . D 4 HOH A 89 353 73 HOH HOH . D 4 HOH A 90 354 74 HOH HOH . D 4 HOH A 91 355 75 HOH HOH . D 4 HOH A 92 356 76 HOH HOH . D 4 HOH A 93 357 77 HOH HOH . D 4 HOH A 94 358 78 HOH HOH . D 4 HOH A 95 359 79 HOH HOH . D 4 HOH A 96 360 80 HOH HOH . D 4 HOH A 97 361 81 HOH HOH . D 4 HOH A 98 362 82 HOH HOH . D 4 HOH A 99 363 83 HOH HOH . D 4 HOH A 100 364 84 HOH HOH . D 4 HOH A 101 365 85 HOH HOH . D 4 HOH A 102 366 86 HOH HOH . D 4 HOH A 103 367 87 HOH HOH . D 4 HOH A 104 368 88 HOH HOH . D 4 HOH A 105 369 89 HOH HOH . D 4 HOH A 106 370 90 HOH HOH . D 4 HOH A 107 371 91 HOH HOH . D 4 HOH A 108 372 92 HOH HOH . D 4 HOH A 109 373 93 HOH HOH . D 4 HOH A 110 374 94 HOH HOH . D 4 HOH A 111 375 95 HOH HOH . D 4 HOH A 112 376 96 HOH HOH . D 4 HOH A 113 377 97 HOH HOH . D 4 HOH A 114 378 98 HOH HOH . D 4 HOH A 115 379 99 HOH HOH . D 4 HOH A 116 380 100 HOH HOH . D 4 HOH A 117 381 101 HOH HOH . D 4 HOH A 118 382 102 HOH HOH . D 4 HOH A 119 383 103 HOH HOH . D 4 HOH A 120 384 104 HOH HOH . D 4 HOH A 121 385 105 HOH HOH . D 4 HOH A 122 386 106 HOH HOH . D 4 HOH A 123 387 107 HOH HOH . D 4 HOH A 124 388 108 HOH HOH . D 4 HOH A 125 389 109 HOH HOH . D 4 HOH A 126 390 110 HOH HOH . D 4 HOH A 127 391 111 HOH HOH . D 4 HOH A 128 392 112 HOH HOH . D 4 HOH A 129 393 113 HOH HOH . D 4 HOH A 130 394 114 HOH HOH . D 4 HOH A 131 395 115 HOH HOH . D 4 HOH A 132 396 116 HOH HOH . D 4 HOH A 133 397 117 HOH HOH . D 4 HOH A 134 398 118 HOH HOH . D 4 HOH A 135 399 119 HOH HOH . D 4 HOH A 136 400 120 HOH HOH . D 4 HOH A 137 401 121 HOH HOH . D 4 HOH A 138 402 122 HOH HOH . D 4 HOH A 139 403 123 HOH HOH . D 4 HOH A 140 404 124 HOH HOH . D 4 HOH A 141 405 125 HOH HOH . D 4 HOH A 142 406 126 HOH HOH . D 4 HOH A 143 407 127 HOH HOH . D 4 HOH A 144 408 128 HOH HOH . D 4 HOH A 145 409 129 HOH HOH . D 4 HOH A 146 410 130 HOH HOH . D 4 HOH A 147 411 131 HOH HOH . D 4 HOH A 148 412 132 HOH HOH . D 4 HOH A 149 413 133 HOH HOH . D 4 HOH A 150 414 134 HOH HOH . D 4 HOH A 151 415 135 HOH HOH . D 4 HOH A 152 416 136 HOH HOH . D 4 HOH A 153 417 137 HOH HOH . D 4 HOH A 154 418 138 HOH HOH . D 4 HOH A 155 419 139 HOH HOH . D 4 HOH A 156 420 140 HOH HOH . D 4 HOH A 157 421 141 HOH HOH . D 4 HOH A 158 422 142 HOH HOH . D 4 HOH A 159 423 143 HOH HOH . D 4 HOH A 160 424 144 HOH HOH . D 4 HOH A 161 425 145 HOH HOH . D 4 HOH A 162 426 146 HOH HOH . D 4 HOH A 163 427 147 HOH HOH . D 4 HOH A 164 428 148 HOH HOH . D 4 HOH A 165 429 149 HOH HOH . D 4 HOH A 166 430 150 HOH HOH . D 4 HOH A 167 431 151 HOH HOH . D 4 HOH A 168 432 152 HOH HOH . D 4 HOH A 169 433 153 HOH HOH . D 4 HOH A 170 434 154 HOH HOH . D 4 HOH A 171 435 155 HOH HOH . D 4 HOH A 172 436 156 HOH HOH . D 4 HOH A 173 437 157 HOH HOH . D 4 HOH A 174 438 158 HOH HOH . D 4 HOH A 175 439 159 HOH HOH . D 4 HOH A 176 440 160 HOH HOH . D 4 HOH A 177 441 161 HOH HOH . D 4 HOH A 178 442 162 HOH HOH . D 4 HOH A 179 443 163 HOH HOH . D 4 HOH A 180 444 164 HOH HOH . D 4 HOH A 181 445 165 HOH HOH . D 4 HOH A 182 446 166 HOH HOH . D 4 HOH A 183 447 167 HOH HOH . D 4 HOH A 184 448 168 HOH HOH . D 4 HOH A 185 449 169 HOH HOH . D 4 HOH A 186 450 170 HOH HOH . D 4 HOH A 187 451 171 HOH HOH . D 4 HOH A 188 452 172 HOH HOH . D 4 HOH A 189 453 173 HOH HOH . D 4 HOH A 190 454 174 HOH HOH . D 4 HOH A 191 455 175 HOH HOH . D 4 HOH A 192 456 176 HOH HOH . D 4 HOH A 193 457 177 HOH HOH . D 4 HOH A 194 458 178 HOH HOH . D 4 HOH A 195 459 179 HOH HOH . D 4 HOH A 196 460 180 HOH HOH . D 4 HOH A 197 461 181 HOH HOH . D 4 HOH A 198 462 182 HOH HOH . D 4 HOH A 199 463 183 HOH HOH . D 4 HOH A 200 464 184 HOH HOH . D 4 HOH A 201 465 185 HOH HOH . D 4 HOH A 202 466 186 HOH HOH . D 4 HOH A 203 467 187 HOH HOH . D 4 HOH A 204 468 188 HOH HOH . D 4 HOH A 205 469 189 HOH HOH . D 4 HOH A 206 470 190 HOH HOH . D 4 HOH A 207 471 191 HOH HOH . D 4 HOH A 208 472 192 HOH HOH . D 4 HOH A 209 473 193 HOH HOH . D 4 HOH A 210 474 194 HOH HOH . D 4 HOH A 211 475 195 HOH HOH . D 4 HOH A 212 476 196 HOH HOH . D 4 HOH A 213 477 197 HOH HOH . D 4 HOH A 214 478 198 HOH HOH . D 4 HOH A 215 479 199 HOH HOH . D 4 HOH A 216 480 200 HOH HOH . D 4 HOH A 217 481 201 HOH HOH . D 4 HOH A 218 482 202 HOH HOH . D 4 HOH A 219 483 203 HOH HOH . D 4 HOH A 220 484 204 HOH HOH . D 4 HOH A 221 485 205 HOH HOH . D 4 HOH A 222 486 206 HOH HOH . D 4 HOH A 223 487 207 HOH HOH . D 4 HOH A 224 488 208 HOH HOH . D 4 HOH A 225 489 209 HOH HOH . D 4 HOH A 226 490 210 HOH HOH . D 4 HOH A 227 491 211 HOH HOH . D 4 HOH A 228 492 212 HOH HOH . D 4 HOH A 229 493 213 HOH HOH . D 4 HOH A 230 494 214 HOH HOH . D 4 HOH A 231 495 215 HOH HOH . D 4 HOH A 232 496 216 HOH HOH . D 4 HOH A 233 497 217 HOH HOH . D 4 HOH A 234 498 218 HOH HOH . D 4 HOH A 235 499 219 HOH HOH . D 4 HOH A 236 500 220 HOH HOH . D 4 HOH A 237 501 221 HOH HOH . D 4 HOH A 238 502 222 HOH HOH . D 4 HOH A 239 503 223 HOH HOH . D 4 HOH A 240 504 224 HOH HOH . D 4 HOH A 241 505 225 HOH HOH . D 4 HOH A 242 506 226 HOH HOH . D 4 HOH A 243 507 227 HOH HOH . D 4 HOH A 244 508 228 HOH HOH . D 4 HOH A 245 509 229 HOH HOH . D 4 HOH A 246 510 230 HOH HOH . D 4 HOH A 247 511 231 HOH HOH . D 4 HOH A 248 512 232 HOH HOH . D 4 HOH A 249 513 233 HOH HOH . D 4 HOH A 250 514 234 HOH HOH . D 4 HOH A 251 515 235 HOH HOH . D 4 HOH A 252 516 236 HOH HOH . D 4 HOH A 253 517 237 HOH HOH . D 4 HOH A 254 518 238 HOH HOH . D 4 HOH A 255 519 239 HOH HOH . D 4 HOH A 256 520 240 HOH HOH . D 4 HOH A 257 521 241 HOH HOH . D 4 HOH A 258 522 242 HOH HOH . D 4 HOH A 259 523 243 HOH HOH . D 4 HOH A 260 524 244 HOH HOH . D 4 HOH A 261 525 245 HOH HOH . D 4 HOH A 262 526 246 HOH HOH . D 4 HOH A 263 527 247 HOH HOH . D 4 HOH A 264 528 248 HOH HOH . D 4 HOH A 265 529 249 HOH HOH . D 4 HOH A 266 530 250 HOH HOH . D 4 HOH A 267 531 251 HOH HOH . D 4 HOH A 268 532 252 HOH HOH . D 4 HOH A 269 533 253 HOH HOH . D 4 HOH A 270 534 254 HOH HOH . D 4 HOH A 271 535 255 HOH HOH . D 4 HOH A 272 536 256 HOH HOH . D 4 HOH A 273 537 257 HOH HOH . D 4 HOH A 274 538 258 HOH HOH . D 4 HOH A 275 539 259 HOH HOH . D 4 HOH A 276 540 260 HOH HOH . D 4 HOH A 277 541 261 HOH HOH . D 4 HOH A 278 542 262 HOH HOH . D 4 HOH A 279 543 263 HOH HOH . D 4 HOH A 280 544 264 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 40.592 _atom_site.Cartn_y -11.361 _atom_site.Cartn_z -6.988 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 9.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 264 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #