data_3ODU # _model_server_result.job_id l4sr1pD-ynZQjzu371w7PQ _model_server_result.datetime_utc '2024-11-23 13:38:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3odu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1605}' # _entry.id 3ODU # _exptl.entry_id 3ODU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 282.461 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OLEIC ACID' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.17 _cell.angle_gamma 90 _cell.entry_id 3ODU _cell.length_a 64.54 _cell.length_b 83.692 _cell.length_c 119.995 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3ODU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 38 A CYS 28 1_555 A SG CYS 448 A CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 119 A CYS 109 1_555 A SG CYS 196 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf3 B SG CYS 38 B CYS 28 1_555 B SG CYS 448 B CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf4 B SG CYS 119 B CYS 109 1_555 B SG CYS 196 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'C18 H34 O2' _chem_comp.formula_weight 282.461 _chem_comp.id OLA _chem_comp.mon_nstd_flag . _chem_comp.name 'OLEIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 OLA doub 301 n n C1 O2 OLA sing 302 n n C1 C2 OLA sing 303 n n O2 HO2 OLA sing 304 n n C2 C3 OLA sing 305 n n C2 H21 OLA sing 306 n n C2 H22 OLA sing 307 n n C3 C4 OLA sing 308 n n C3 H31 OLA sing 309 n n C3 H32 OLA sing 310 n n C4 C5 OLA sing 311 n n C4 H41 OLA sing 312 n n C4 H42 OLA sing 313 n n C5 C6 OLA sing 314 n n C5 H51 OLA sing 315 n n C5 H52 OLA sing 316 n n C6 C7 OLA sing 317 n n C6 H61 OLA sing 318 n n C6 H62 OLA sing 319 n n C7 C8 OLA sing 320 n n C7 H71 OLA sing 321 n n C7 H72 OLA sing 322 n n C8 C9 OLA sing 323 n n C8 H81 OLA sing 324 n n C8 H82 OLA sing 325 n n C9 C10 OLA doub 326 z n C9 H9 OLA sing 327 n n C10 C11 OLA sing 328 n n C10 H10 OLA sing 329 n n C11 C12 OLA sing 330 n n C11 H111 OLA sing 331 n n C11 H112 OLA sing 332 n n C12 C13 OLA sing 333 n n C12 H121 OLA sing 334 n n C12 H122 OLA sing 335 n n C13 C14 OLA sing 336 n n C13 H131 OLA sing 337 n n C13 H132 OLA sing 338 n n C14 C15 OLA sing 339 n n C14 H141 OLA sing 340 n n C14 H142 OLA sing 341 n n C15 C16 OLA sing 342 n n C15 H151 OLA sing 343 n n C15 H152 OLA sing 344 n n C16 C17 OLA sing 345 n n C16 H161 OLA sing 346 n n C16 H162 OLA sing 347 n n C17 C18 OLA sing 348 n n C17 H171 OLA sing 349 n n C17 H172 OLA sing 350 n n C18 H181 OLA sing 351 n n C18 H182 OLA sing 352 n n C18 H183 OLA sing 353 n n # _atom_sites.entry_id 3ODU _atom_sites.fract_transf_matrix[1][1] 0.015494 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003341 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011949 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008525 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ITD A 1 1500 1500 ITD ITD . D 3 OLC A 1 1600 1600 OLC OLC . E 3 OLC A 1 1603 1603 OLC OLC . F 3 OLC A 1 1604 1604 OLC OLC . G 4 OLA A 1 1610 1610 OLA OLA . H 2 ITD B 1 1500 1500 ITD ITD . I 3 OLC B 1 1601 1601 OLC OLC . J 3 OLC B 1 1602 1602 OLC OLC . K 4 OLA B 1 1605 1605 OLA OLA . L 4 OLA B 1 1606 1606 OLA OLA . M 4 OLA B 1 1607 1607 OLA OLA . N 4 OLA B 1 1608 1608 OLA OLA . O 4 OLA B 1 1609 1609 OLA OLA . P 5 HOH A 1 1612 1612 HOH HOH . P 5 HOH A 2 1613 1613 HOH HOH . P 5 HOH A 3 1614 1614 HOH HOH . P 5 HOH A 4 1615 1615 HOH HOH . P 5 HOH A 5 1622 1622 HOH HOH . P 5 HOH A 6 1625 1625 HOH HOH . P 5 HOH A 7 1626 1626 HOH HOH . P 5 HOH A 8 1628 1628 HOH HOH . P 5 HOH A 9 1629 1629 HOH HOH . P 5 HOH A 10 1630 1630 HOH HOH . P 5 HOH A 11 1631 1631 HOH HOH . P 5 HOH A 12 1632 1632 HOH HOH . P 5 HOH A 13 1633 1633 HOH HOH . P 5 HOH A 14 1638 1638 HOH HOH . P 5 HOH A 15 1639 1639 HOH HOH . P 5 HOH A 16 1640 1640 HOH HOH . P 5 HOH A 17 1644 1644 HOH HOH . P 5 HOH A 18 1645 1645 HOH HOH . P 5 HOH A 19 1650 1650 HOH HOH . P 5 HOH A 20 1651 1651 HOH HOH . P 5 HOH A 21 1653 1653 HOH HOH . P 5 HOH A 22 1654 1654 HOH HOH . P 5 HOH A 23 1655 1655 HOH HOH . P 5 HOH A 24 1656 1656 HOH HOH . P 5 HOH A 25 1664 1664 HOH HOH . P 5 HOH A 26 1668 1668 HOH HOH . P 5 HOH A 27 1669 1669 HOH HOH . P 5 HOH A 28 1670 1670 HOH HOH . P 5 HOH A 29 1671 1671 HOH HOH . P 5 HOH A 30 1672 1672 HOH HOH . P 5 HOH A 31 1674 1674 HOH HOH . P 5 HOH A 32 1675 1675 HOH HOH . P 5 HOH A 33 1676 1676 HOH HOH . P 5 HOH A 34 1677 1677 HOH HOH . P 5 HOH A 35 1679 1679 HOH HOH . P 5 HOH A 36 1680 1680 HOH HOH . P 5 HOH A 37 1681 1681 HOH HOH . P 5 HOH A 38 1682 1682 HOH HOH . P 5 HOH A 39 1693 1693 HOH HOH . P 5 HOH A 40 1694 1694 HOH HOH . P 5 HOH A 41 1695 1695 HOH HOH . P 5 HOH A 42 1701 1701 HOH HOH . P 5 HOH A 43 1704 1704 HOH HOH . P 5 HOH A 44 1705 1705 HOH HOH . P 5 HOH A 45 1710 1710 HOH HOH . P 5 HOH A 46 1712 1712 HOH HOH . P 5 HOH A 47 1713 1713 HOH HOH . P 5 HOH A 48 1715 1715 HOH HOH . P 5 HOH A 49 1716 1716 HOH HOH . P 5 HOH A 50 1717 1717 HOH HOH . P 5 HOH A 51 1718 1718 HOH HOH . P 5 HOH A 52 1719 1719 HOH HOH . P 5 HOH A 53 1720 1720 HOH HOH . P 5 HOH A 54 1723 1723 HOH HOH . P 5 HOH A 55 1725 1725 HOH HOH . P 5 HOH A 56 1727 1727 HOH HOH . P 5 HOH A 57 1729 1729 HOH HOH . P 5 HOH A 58 1734 1734 HOH HOH . P 5 HOH A 59 1735 1735 HOH HOH . P 5 HOH A 60 1736 1736 HOH HOH . P 5 HOH A 61 1739 1739 HOH HOH . P 5 HOH A 62 1742 1742 HOH HOH . P 5 HOH A 63 1743 1743 HOH HOH . P 5 HOH A 64 1744 1744 HOH HOH . P 5 HOH A 65 1747 1747 HOH HOH . P 5 HOH A 66 1748 1748 HOH HOH . P 5 HOH A 67 1749 1749 HOH HOH . P 5 HOH A 68 1752 1752 HOH HOH . P 5 HOH A 69 1753 1753 HOH HOH . P 5 HOH A 70 1754 1754 HOH HOH . P 5 HOH A 71 1755 1755 HOH HOH . P 5 HOH A 72 1756 1756 HOH HOH . P 5 HOH A 73 1758 1758 HOH HOH . Q 5 HOH B 1 1611 1611 HOH HOH . Q 5 HOH B 2 1616 1616 HOH HOH . Q 5 HOH B 3 1617 1617 HOH HOH . Q 5 HOH B 4 1618 1618 HOH HOH . Q 5 HOH B 5 1619 1619 HOH HOH . Q 5 HOH B 6 1620 1620 HOH HOH . Q 5 HOH B 7 1621 1621 HOH HOH . Q 5 HOH B 8 1623 1623 HOH HOH . Q 5 HOH B 9 1624 1624 HOH HOH . Q 5 HOH B 10 1627 1627 HOH HOH . Q 5 HOH B 11 1634 1634 HOH HOH . Q 5 HOH B 12 1635 1635 HOH HOH . Q 5 HOH B 13 1636 1636 HOH HOH . Q 5 HOH B 14 1637 1637 HOH HOH . Q 5 HOH B 15 1641 1641 HOH HOH . Q 5 HOH B 16 1642 1642 HOH HOH . Q 5 HOH B 17 1643 1643 HOH HOH . Q 5 HOH B 18 1646 1646 HOH HOH . Q 5 HOH B 19 1648 1648 HOH HOH . Q 5 HOH B 20 1649 1649 HOH HOH . Q 5 HOH B 21 1652 1652 HOH HOH . Q 5 HOH B 22 1657 1657 HOH HOH . Q 5 HOH B 23 1658 1658 HOH HOH . Q 5 HOH B 24 1659 1659 HOH HOH . Q 5 HOH B 25 1660 1660 HOH HOH . Q 5 HOH B 26 1661 1661 HOH HOH . Q 5 HOH B 27 1662 1662 HOH HOH . Q 5 HOH B 28 1663 1663 HOH HOH . Q 5 HOH B 29 1665 1665 HOH HOH . Q 5 HOH B 30 1666 1666 HOH HOH . Q 5 HOH B 31 1667 1667 HOH HOH . Q 5 HOH B 32 1673 1673 HOH HOH . Q 5 HOH B 33 1683 1683 HOH HOH . Q 5 HOH B 34 1684 1684 HOH HOH . Q 5 HOH B 35 1685 1685 HOH HOH . Q 5 HOH B 36 1686 1686 HOH HOH . Q 5 HOH B 37 1687 1687 HOH HOH . Q 5 HOH B 38 1688 1688 HOH HOH . Q 5 HOH B 39 1689 1689 HOH HOH . Q 5 HOH B 40 1690 1690 HOH HOH . Q 5 HOH B 41 1691 1691 HOH HOH . Q 5 HOH B 42 1692 1692 HOH HOH . Q 5 HOH B 43 1696 1696 HOH HOH . Q 5 HOH B 44 1697 1697 HOH HOH . Q 5 HOH B 45 1698 1698 HOH HOH . Q 5 HOH B 46 1699 1699 HOH HOH . Q 5 HOH B 47 1700 1700 HOH HOH . Q 5 HOH B 48 1702 1702 HOH HOH . Q 5 HOH B 49 1703 1703 HOH HOH . Q 5 HOH B 50 1706 1706 HOH HOH . Q 5 HOH B 51 1707 1707 HOH HOH . Q 5 HOH B 52 1708 1708 HOH HOH . Q 5 HOH B 53 1711 1711 HOH HOH . Q 5 HOH B 54 1721 1721 HOH HOH . Q 5 HOH B 55 1722 1722 HOH HOH . Q 5 HOH B 56 1724 1724 HOH HOH . Q 5 HOH B 57 1726 1726 HOH HOH . Q 5 HOH B 58 1728 1728 HOH HOH . Q 5 HOH B 59 1730 1730 HOH HOH . Q 5 HOH B 60 1731 1731 HOH HOH . Q 5 HOH B 61 1737 1737 HOH HOH . Q 5 HOH B 62 1738 1738 HOH HOH . Q 5 HOH B 63 1740 1740 HOH HOH . Q 5 HOH B 64 1741 1741 HOH HOH . Q 5 HOH B 65 1745 1745 HOH HOH . Q 5 HOH B 66 1746 1746 HOH HOH . Q 5 HOH B 67 1750 1750 HOH HOH . Q 5 HOH B 68 1751 1751 HOH HOH . Q 5 HOH B 69 1757 1757 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 OLA . . . K 4 -29.448 21.832 76.893 1 83.13 ? C1 OLA 1605 B 1 HETATM 2 O O1 OLA . . . K 4 -29.422 22.218 78.082 1 59.03 ? O1 OLA 1605 B 1 HETATM 3 O O2 OLA . . . K 4 -30.295 20.973 76.559 1 69.93 ? O2 OLA 1605 B 1 HETATM 4 C C2 OLA . . . K 4 -28.479 22.412 75.885 1 49.29 ? C2 OLA 1605 B 1 HETATM 5 C C3 OLA . . . K 4 -28.035 21.359 74.874 1 62 ? C3 OLA 1605 B 1 HETATM 6 C C4 OLA . . . K 4 -28.25 21.844 73.445 1 39.29 ? C4 OLA 1605 B 1 HETATM 7 C C5 OLA . . . K 4 -26.925 22.189 72.774 1 38.73 ? C5 OLA 1605 B 1 HETATM 8 C C6 OLA . . . K 4 -27.108 23.282 71.726 1 32.88 ? C6 OLA 1605 B 1 HETATM 9 C C7 OLA . . . K 4 -26.253 23.022 70.492 1 54.14 ? C7 OLA 1605 B 1 HETATM 10 C C8 OLA . . . K 4 -25.766 24.324 69.867 1 59.39 ? C8 OLA 1605 B 1 HETATM 11 C C9 OLA . . . K 4 -24.685 24.018 68.855 1 38.48 ? C9 OLA 1605 B 1 HETATM 12 C C10 OLA . . . K 4 -23.961 24.977 68.27 1 150.46 ? C10 OLA 1605 B 1 HETATM 13 C C11 OLA . . . K 4 -24.163 26.449 68.56 1 34.81 ? C11 OLA 1605 B 1 HETATM 14 C C12 OLA . . . K 4 -23.308 26.868 69.755 1 37.87 ? C12 OLA 1605 B 1 HETATM 15 C C13 OLA . . . K 4 -22.79 28.295 69.597 1 38.93 ? C13 OLA 1605 B 1 HETATM 16 C C14 OLA . . . K 4 -22.039 28.739 70.848 1 48.07 ? C14 OLA 1605 B 1 HETATM 17 C C15 OLA . . . K 4 -22.273 30.217 71.14 1 49.45 ? C15 OLA 1605 B 1 HETATM 18 C C16 OLA . . . K 4 -21.209 31.078 70.468 1 61.15 ? C16 OLA 1605 B 1 HETATM 19 C C17 OLA . . . K 4 -21.597 32.555 70.455 1 41.76 ? C17 OLA 1605 B 1 HETATM 20 C C18 OLA . . . K 4 -20.51 33.397 69.79 1 36.05 ? C18 OLA 1605 B 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 20 #