data_3OE8
#
_model_server_result.job_id            Pq1vk9pPcjcrXt1AHwGW2A 
_model_server_result.datetime_utc      '2024-11-27 08:19:37' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oe8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1500}' 
#
_entry.id    3OE8 
#
_exptl.entry_id    3OE8 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              406.651 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         96 
_cell.angle_beta          97.78 
_cell.angle_gamma         97.38 
_cell.entry_id            3OE8 
_cell.length_a            69.369 
_cell.length_b            76.602 
_cell.length_c            91.719 
_cell.Z_PDB               3 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OE8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA trimeric 3 software_defined_assembly 2 
PISA monomeric 1 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
B,C,E,F 1 1 
A,B,C,D,E,F 2 1 
A,D 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 38 A CYS 28 1_555 A SG CYS 448 A CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
disulf ? disulf2 A SG CYS 119 A CYS 109 1_555 A SG CYS 196 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 38 B CYS 28 1_555 B SG CYS 448 B CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf4 B SG CYS 119 B CYS 109 1_555 B SG CYS 196 B CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
disulf ? disulf5 C SG CYS 38 C CYS 28 1_555 C SG CYS 448 C CYS 274 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf6 C SG CYS 119 C CYS 109 1_555 C SG CYS 196 C CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
covale ? covale1 A C SER 239 A SER 229 1_555 A N GLY 240 A GLY 900 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.282 ? 
covale ? covale2 A C SER 241 A SER 901 1_555 A N ASN 242 A ASN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale3 B N LYS 404 B LYS 230 1_555 B C SER 403 B SER 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale4 B C TYR 401 B TYR 1161 1_555 B N GLY 402 B GLY 1200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.375 ? 
covale ? covale5 C N LYS 404 C LYS 230 1_555 C C SER 403 C SER 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.399 ? 
covale ? covale6 C C TYR 401 C TYR 1161 1_555 C N GLY 402 C GLY 1200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? 
#
_chem_comp.formula           'C21 H34 N4 S2' 
_chem_comp.formula_weight    406.651 
_chem_comp.id                ITD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 ITD sing 171 n n 
N1 C2 ITD sing 172 n n 
N1 C4 ITD doub 173 n n 
S1 C5 ITD sing 174 n n 
C2 C6 ITD sing 175 n n 
N2 C7 ITD sing 176 n n 
S2 C9 ITD sing 177 n n 
C3 C2 ITD sing 178 n n 
N3 C10 ITD sing 179 n n 
C4 S1 ITD sing 180 n n 
C4 N2 ITD sing 181 n n 
N4 C9 ITD doub 182 n n 
C6 N2 ITD sing 183 n n 
C7 C5 ITD doub 184 n n 
C7 C8 ITD sing 185 n n 
C8 S2 ITD sing 186 n n 
C9 N3 ITD sing 187 n n 
C10 C11 ITD sing 188 n n 
C11 C12 ITD sing 189 n n 
C13 C12 ITD sing 190 n n 
C14 C13 ITD sing 191 n n 
C15 C10 ITD sing 192 n n 
C15 C14 ITD sing 193 n n 
C16 N4 ITD sing 194 n n 
C17 C16 ITD sing 195 n n 
C18 C17 ITD sing 196 n n 
C19 C18 ITD sing 197 n n 
C19 C20 ITD sing 198 n n 
C20 C21 ITD sing 199 n n 
C21 C16 ITD sing 200 n n 
C1 H1 ITD sing 201 n n 
C1 H1A ITD sing 202 n n 
C1 H1B ITD sing 203 n n 
C3 H3 ITD sing 204 n n 
C3 H3A ITD sing 205 n n 
C3 H3B ITD sing 206 n n 
N3 HN3 ITD sing 207 n n 
C5 H5 ITD sing 208 n n 
C6 H6 ITD sing 209 n n 
C6 H6A ITD sing 210 n n 
C8 H8 ITD sing 211 n n 
C8 H8A ITD sing 212 n n 
C10 H10 ITD sing 213 n n 
C11 H11 ITD sing 214 n n 
C11 H11A ITD sing 215 n n 
C12 H12 ITD sing 216 n n 
C12 H12A ITD sing 217 n n 
C13 H13 ITD sing 218 n n 
C13 H13A ITD sing 219 n n 
C14 H14 ITD sing 220 n n 
C14 H14A ITD sing 221 n n 
C15 H15 ITD sing 222 n n 
C15 H15A ITD sing 223 n n 
C16 H16 ITD sing 224 n n 
C17 H17 ITD sing 225 n n 
C17 H17A ITD sing 226 n n 
C18 H18 ITD sing 227 n n 
C18 H18A ITD sing 228 n n 
C19 H19 ITD sing 229 n n 
C19 H19A ITD sing 230 n n 
C20 H20 ITD sing 231 n n 
C20 H20A ITD sing 232 n n 
C21 H21 ITD sing 233 n n 
C21 H21A ITD sing 234 n n 
#
_atom_sites.entry_id                     3OE8 
_atom_sites.fract_transf_matrix[1][1]    0.014416 
_atom_sites.fract_transf_matrix[1][2]    0.001867 
_atom_sites.fract_transf_matrix[1][3]    0.002218 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013164 
_atom_sites.fract_transf_matrix[2][3]    0.001646 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01109 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 ITD A 1 1500 1500 ITD ITD . 
E 2 ITD B 1 1500 1500 ITD ITD . 
F 2 ITD C 1 1500 1500 ITD ITD . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 ITD . . . D 2 -28.403 -0.08 23.035 1 72.83 ? C1 ITD 1500 A 1 
HETATM 2 N N1 ITD . . . D 2 -30.641 0.818 22.781 1 188.81 ? N1 ITD 1500 A 1 
HETATM 3 S S1 ITD . . . D 2 -32.903 0.534 21.16 1 106.59 ? S1 ITD 1500 A 1 
HETATM 4 C C2 ITD . . . D 2 -29.229 1.1 22.545 1 101.24 ? C2 ITD 1500 A 1 
HETATM 5 N N2 ITD . . . D 2 -30.455 1.01 20.609 1 94.22 ? N2 ITD 1500 A 1 
HETATM 6 S S2 ITD . . . D 2 -30.272 2.983 17.927 1 95.23 ? S2 ITD 1500 A 1 
HETATM 7 C C3 ITD . . . D 2 -28.859 2.396 23.265 1 54.88 ? C3 ITD 1500 A 1 
HETATM 8 N N3 ITD . . . D 2 -32.532 2.822 16.783 1 81.09 ? N3 ITD 1500 A 1 
HETATM 9 C C4 ITD . . . D 2 -31.268 0.778 21.601 1 129.54 ? C4 ITD 1500 A 1 
HETATM 10 N N4 ITD . . . D 2 -32.135 4.833 17.98 1 124.06 ? N4 ITD 1500 A 1 
HETATM 11 C C5 ITD . . . D 2 -32.47 0.723 19.486 1 113.39 ? C5 ITD 1500 A 1 
HETATM 12 C C6 ITD . . . D 2 -29.079 1.241 21.02 1 131.96 ? C6 ITD 1500 A 1 
HETATM 13 C C7 ITD . . . D 2 -31.081 0.971 19.404 1 191.69 ? C7 ITD 1500 A 1 
HETATM 14 C C8 ITD . . . D 2 -30.368 1.233 18.104 1 168.4 ? C8 ITD 1500 A 1 
HETATM 15 C C9 ITD . . . D 2 -31.773 3.609 17.558 1 117.72 ? C9 ITD 1500 A 1 
HETATM 16 C C10 ITD . . . D 2 -33.854 3.008 16.205 1 133.38 ? C10 ITD 1500 A 1 
HETATM 17 C C11 ITD . . . D 2 -33.818 3.75 14.876 1 107.43 ? C11 ITD 1500 A 1 
HETATM 18 C C12 ITD . . . D 2 -35.148 3.572 14.149 1 90.75 ? C12 ITD 1500 A 1 
HETATM 19 C C13 ITD . . . D 2 -36.31 4.064 15.009 1 117.5 ? C13 ITD 1500 A 1 
HETATM 20 C C14 ITD . . . D 2 -36.33 3.38 16.376 1 45.18 ? C14 ITD 1500 A 1 
HETATM 21 C C15 ITD . . . D 2 -34.986 3.489 17.106 1 187.01 ? C15 ITD 1500 A 1 
HETATM 22 C C16 ITD . . . D 2 -32.216 5.324 19.363 1 75.22 ? C16 ITD 1500 A 1 
HETATM 23 C C17 ITD . . . D 2 -31.26 4.683 20.371 1 99.53 ? C17 ITD 1500 A 1 
HETATM 24 C C18 ITD . . . D 2 -31.481 5.214 21.79 1 164.68 ? C18 ITD 1500 A 1 
HETATM 25 C C19 ITD . . . D 2 -31.377 6.738 21.877 1 37.69 ? C19 ITD 1500 A 1 
HETATM 26 C C20 ITD . . . D 2 -32.245 7.409 20.812 1 95.34 ? C20 ITD 1500 A 1 
HETATM 27 C C21 ITD . . . D 2 -32.01 6.838 19.411 1 105.79 ? C21 ITD 1500 A 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    37 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           27 
#