data_3OEK # _model_server_result.job_id smMldZi4MOvXwcsEwpShag _model_server_result.datetime_utc '2024-11-15 12:31:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oek # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 3OEK # _exptl.entry_id 3OEK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 133.103 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ASPARTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OEK _cell.length_a 59.728 _cell.length_b 114.062 _cell.length_c 94.928 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OEK _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 30 A CYS 30 1_555 A SG CYS 58 A CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? disulf ? disulf2 A SG CYS 37 A CYS 37 1_555 A SG CYS 59 A CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf3 A SG CYS 229 A CYS 229 1_555 A SG CYS 284 A CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? # _chem_comp.formula 'C4 H7 N O4' _chem_comp.formula_weight 133.103 _chem_comp.id ASP _chem_comp.mon_nstd_flag y _chem_comp.name 'ASPARTIC ACID' _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA ASP sing 55 n n N H ASP sing 56 n n N H2 ASP sing 57 n n CA C ASP sing 58 n n CA CB ASP sing 59 n n CA HA ASP sing 60 n n C O ASP doub 61 n n C OXT ASP sing 62 n n CB CG ASP sing 63 n n CB HB2 ASP sing 64 n n CB HB3 ASP sing 65 n n CG OD1 ASP doub 66 n n CG OD2 ASP sing 67 n n OD2 HD2 ASP sing 68 n n OXT HXT ASP sing 69 n n # _atom_sites.entry_id 3OEK _atom_sites.fract_transf_matrix[1][1] 0.016743 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008767 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010534 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ASP A 1 1001 1001 ASP ASP . C 3 HOH A 1 287 1 HOH HOH . C 3 HOH A 2 288 2 HOH HOH . C 3 HOH A 3 289 3 HOH HOH . C 3 HOH A 4 290 4 HOH HOH . C 3 HOH A 5 291 5 HOH HOH . C 3 HOH A 6 292 6 HOH HOH . C 3 HOH A 7 293 7 HOH HOH . C 3 HOH A 8 294 8 HOH HOH . C 3 HOH A 9 295 9 HOH HOH . C 3 HOH A 10 296 10 HOH HOH . C 3 HOH A 11 297 11 HOH HOH . C 3 HOH A 12 298 12 HOH HOH . C 3 HOH A 13 299 13 HOH HOH . C 3 HOH A 14 300 14 HOH HOH . C 3 HOH A 15 301 15 HOH HOH . C 3 HOH A 16 302 16 HOH HOH . C 3 HOH A 17 303 17 HOH HOH . C 3 HOH A 18 304 18 HOH HOH . C 3 HOH A 19 305 19 HOH HOH . C 3 HOH A 20 306 20 HOH HOH . C 3 HOH A 21 307 21 HOH HOH . C 3 HOH A 22 308 22 HOH HOH . C 3 HOH A 23 309 23 HOH HOH . C 3 HOH A 24 310 24 HOH HOH . C 3 HOH A 25 311 25 HOH HOH . C 3 HOH A 26 312 26 HOH HOH . C 3 HOH A 27 313 27 HOH HOH . C 3 HOH A 28 314 28 HOH HOH . C 3 HOH A 29 315 29 HOH HOH . C 3 HOH A 30 316 30 HOH HOH . C 3 HOH A 31 317 31 HOH HOH . C 3 HOH A 32 318 32 HOH HOH . C 3 HOH A 33 319 33 HOH HOH . C 3 HOH A 34 320 34 HOH HOH . C 3 HOH A 35 321 35 HOH HOH . C 3 HOH A 36 322 36 HOH HOH . C 3 HOH A 37 323 37 HOH HOH . C 3 HOH A 38 324 38 HOH HOH . C 3 HOH A 39 325 39 HOH HOH . C 3 HOH A 40 326 40 HOH HOH . C 3 HOH A 41 327 41 HOH HOH . C 3 HOH A 42 328 42 HOH HOH . C 3 HOH A 43 329 43 HOH HOH . C 3 HOH A 44 330 44 HOH HOH . C 3 HOH A 45 331 45 HOH HOH . C 3 HOH A 46 332 46 HOH HOH . C 3 HOH A 47 333 47 HOH HOH . C 3 HOH A 48 334 48 HOH HOH . C 3 HOH A 49 335 49 HOH HOH . C 3 HOH A 50 336 50 HOH HOH . C 3 HOH A 51 337 51 HOH HOH . C 3 HOH A 52 338 52 HOH HOH . C 3 HOH A 53 339 53 HOH HOH . C 3 HOH A 54 340 54 HOH HOH . C 3 HOH A 55 341 55 HOH HOH . C 3 HOH A 56 342 56 HOH HOH . C 3 HOH A 57 343 57 HOH HOH . C 3 HOH A 58 344 58 HOH HOH . C 3 HOH A 59 345 59 HOH HOH . C 3 HOH A 60 346 60 HOH HOH . C 3 HOH A 61 347 61 HOH HOH . C 3 HOH A 62 348 62 HOH HOH . C 3 HOH A 63 349 63 HOH HOH . C 3 HOH A 64 350 64 HOH HOH . C 3 HOH A 65 351 65 HOH HOH . C 3 HOH A 66 352 66 HOH HOH . C 3 HOH A 67 353 67 HOH HOH . C 3 HOH A 68 354 68 HOH HOH . C 3 HOH A 69 355 69 HOH HOH . C 3 HOH A 70 356 70 HOH HOH . C 3 HOH A 71 357 71 HOH HOH . C 3 HOH A 72 358 72 HOH HOH . C 3 HOH A 73 359 73 HOH HOH . C 3 HOH A 74 360 74 HOH HOH . C 3 HOH A 75 361 75 HOH HOH . C 3 HOH A 76 362 76 HOH HOH . C 3 HOH A 77 363 77 HOH HOH . C 3 HOH A 78 364 78 HOH HOH . C 3 HOH A 79 365 79 HOH HOH . C 3 HOH A 80 366 80 HOH HOH . C 3 HOH A 81 367 81 HOH HOH . C 3 HOH A 82 368 82 HOH HOH . C 3 HOH A 83 369 83 HOH HOH . C 3 HOH A 84 370 84 HOH HOH . C 3 HOH A 85 371 85 HOH HOH . C 3 HOH A 86 372 86 HOH HOH . C 3 HOH A 87 373 87 HOH HOH . C 3 HOH A 88 374 88 HOH HOH . C 3 HOH A 89 375 89 HOH HOH . C 3 HOH A 90 376 90 HOH HOH . C 3 HOH A 91 377 91 HOH HOH . C 3 HOH A 92 378 92 HOH HOH . C 3 HOH A 93 379 93 HOH HOH . C 3 HOH A 94 380 94 HOH HOH . C 3 HOH A 95 381 95 HOH HOH . C 3 HOH A 96 382 96 HOH HOH . C 3 HOH A 97 383 97 HOH HOH . C 3 HOH A 98 384 98 HOH HOH . C 3 HOH A 99 385 99 HOH HOH . C 3 HOH A 100 386 100 HOH HOH . C 3 HOH A 101 387 101 HOH HOH . C 3 HOH A 102 388 102 HOH HOH . C 3 HOH A 103 389 103 HOH HOH . C 3 HOH A 104 390 104 HOH HOH . C 3 HOH A 105 391 105 HOH HOH . C 3 HOH A 106 392 106 HOH HOH . C 3 HOH A 107 393 107 HOH HOH . C 3 HOH A 108 394 108 HOH HOH . C 3 HOH A 109 395 109 HOH HOH . C 3 HOH A 110 396 110 HOH HOH . C 3 HOH A 111 397 111 HOH HOH . C 3 HOH A 112 398 112 HOH HOH . C 3 HOH A 113 399 113 HOH HOH . C 3 HOH A 114 400 114 HOH HOH . C 3 HOH A 115 401 115 HOH HOH . C 3 HOH A 116 402 116 HOH HOH . C 3 HOH A 117 403 117 HOH HOH . C 3 HOH A 118 404 118 HOH HOH . C 3 HOH A 119 405 119 HOH HOH . C 3 HOH A 120 406 120 HOH HOH . C 3 HOH A 121 407 121 HOH HOH . C 3 HOH A 122 408 122 HOH HOH . C 3 HOH A 123 409 123 HOH HOH . C 3 HOH A 124 410 124 HOH HOH . C 3 HOH A 125 411 125 HOH HOH . C 3 HOH A 126 412 126 HOH HOH . C 3 HOH A 127 413 127 HOH HOH . C 3 HOH A 128 414 128 HOH HOH . C 3 HOH A 129 415 129 HOH HOH . C 3 HOH A 130 416 130 HOH HOH . C 3 HOH A 131 417 131 HOH HOH . C 3 HOH A 132 418 132 HOH HOH . C 3 HOH A 133 419 133 HOH HOH . C 3 HOH A 134 420 134 HOH HOH . C 3 HOH A 135 421 135 HOH HOH . C 3 HOH A 136 422 136 HOH HOH . C 3 HOH A 137 423 137 HOH HOH . C 3 HOH A 138 424 138 HOH HOH . C 3 HOH A 139 425 139 HOH HOH . C 3 HOH A 140 426 140 HOH HOH . C 3 HOH A 141 427 141 HOH HOH . C 3 HOH A 142 428 142 HOH HOH . C 3 HOH A 143 429 143 HOH HOH . C 3 HOH A 144 430 144 HOH HOH . C 3 HOH A 145 431 145 HOH HOH . C 3 HOH A 146 432 146 HOH HOH . C 3 HOH A 147 433 147 HOH HOH . C 3 HOH A 148 434 148 HOH HOH . C 3 HOH A 149 435 149 HOH HOH . C 3 HOH A 150 436 150 HOH HOH . C 3 HOH A 151 437 151 HOH HOH . C 3 HOH A 152 438 152 HOH HOH . C 3 HOH A 153 439 153 HOH HOH . C 3 HOH A 154 440 154 HOH HOH . C 3 HOH A 155 441 155 HOH HOH . C 3 HOH A 156 442 156 HOH HOH . C 3 HOH A 157 443 157 HOH HOH . C 3 HOH A 158 444 158 HOH HOH . C 3 HOH A 159 445 159 HOH HOH . C 3 HOH A 160 446 160 HOH HOH . C 3 HOH A 161 447 161 HOH HOH . C 3 HOH A 162 448 162 HOH HOH . C 3 HOH A 163 449 163 HOH HOH . C 3 HOH A 164 450 164 HOH HOH . C 3 HOH A 165 451 165 HOH HOH . C 3 HOH A 166 452 166 HOH HOH . C 3 HOH A 167 453 167 HOH HOH . C 3 HOH A 168 454 168 HOH HOH . C 3 HOH A 169 455 169 HOH HOH . C 3 HOH A 170 456 170 HOH HOH . C 3 HOH A 171 457 171 HOH HOH . C 3 HOH A 172 458 172 HOH HOH . C 3 HOH A 173 459 173 HOH HOH . C 3 HOH A 174 460 174 HOH HOH . C 3 HOH A 175 461 175 HOH HOH . C 3 HOH A 176 462 176 HOH HOH . C 3 HOH A 177 463 177 HOH HOH . C 3 HOH A 178 464 178 HOH HOH . C 3 HOH A 179 465 179 HOH HOH . C 3 HOH A 180 466 180 HOH HOH . C 3 HOH A 181 467 181 HOH HOH . C 3 HOH A 182 468 182 HOH HOH . C 3 HOH A 183 469 183 HOH HOH . C 3 HOH A 184 470 184 HOH HOH . C 3 HOH A 185 471 185 HOH HOH . C 3 HOH A 186 472 186 HOH HOH . C 3 HOH A 187 473 187 HOH HOH . C 3 HOH A 188 474 188 HOH HOH . C 3 HOH A 189 475 189 HOH HOH . C 3 HOH A 190 476 190 HOH HOH . C 3 HOH A 191 477 191 HOH HOH . C 3 HOH A 192 478 192 HOH HOH . C 3 HOH A 193 479 193 HOH HOH . C 3 HOH A 194 480 194 HOH HOH . C 3 HOH A 195 481 195 HOH HOH . C 3 HOH A 196 482 196 HOH HOH . C 3 HOH A 197 483 197 HOH HOH . C 3 HOH A 198 484 198 HOH HOH . C 3 HOH A 199 485 199 HOH HOH . C 3 HOH A 200 486 200 HOH HOH . C 3 HOH A 201 487 201 HOH HOH . C 3 HOH A 202 488 202 HOH HOH . C 3 HOH A 203 489 203 HOH HOH . C 3 HOH A 204 490 204 HOH HOH . C 3 HOH A 205 491 205 HOH HOH . C 3 HOH A 206 492 206 HOH HOH . C 3 HOH A 207 493 207 HOH HOH . C 3 HOH A 208 494 208 HOH HOH . C 3 HOH A 209 495 209 HOH HOH . C 3 HOH A 210 496 210 HOH HOH . C 3 HOH A 211 497 211 HOH HOH . C 3 HOH A 212 498 212 HOH HOH . C 3 HOH A 213 499 213 HOH HOH . C 3 HOH A 214 500 214 HOH HOH . C 3 HOH A 215 501 215 HOH HOH . C 3 HOH A 216 502 216 HOH HOH . C 3 HOH A 217 503 217 HOH HOH . C 3 HOH A 218 504 218 HOH HOH . C 3 HOH A 219 505 219 HOH HOH . C 3 HOH A 220 506 220 HOH HOH . C 3 HOH A 221 507 221 HOH HOH . C 3 HOH A 222 508 222 HOH HOH . C 3 HOH A 223 509 223 HOH HOH . C 3 HOH A 224 510 224 HOH HOH . C 3 HOH A 225 511 225 HOH HOH . C 3 HOH A 226 512 226 HOH HOH . C 3 HOH A 227 513 227 HOH HOH . C 3 HOH A 228 514 228 HOH HOH . C 3 HOH A 229 515 229 HOH HOH . C 3 HOH A 230 516 230 HOH HOH . C 3 HOH A 231 517 231 HOH HOH . C 3 HOH A 232 518 232 HOH HOH . C 3 HOH A 233 519 233 HOH HOH . C 3 HOH A 234 520 234 HOH HOH . C 3 HOH A 235 521 235 HOH HOH . C 3 HOH A 236 522 236 HOH HOH . C 3 HOH A 237 523 237 HOH HOH . C 3 HOH A 238 524 238 HOH HOH . C 3 HOH A 239 525 239 HOH HOH . C 3 HOH A 240 526 240 HOH HOH . C 3 HOH A 241 527 241 HOH HOH . C 3 HOH A 242 528 242 HOH HOH . C 3 HOH A 243 529 243 HOH HOH . C 3 HOH A 244 530 244 HOH HOH . C 3 HOH A 245 531 245 HOH HOH . C 3 HOH A 246 532 246 HOH HOH . C 3 HOH A 247 533 247 HOH HOH . C 3 HOH A 248 534 248 HOH HOH . C 3 HOH A 249 535 249 HOH HOH . C 3 HOH A 250 536 250 HOH HOH . C 3 HOH A 251 537 251 HOH HOH . C 3 HOH A 252 538 252 HOH HOH . C 3 HOH A 253 539 253 HOH HOH . C 3 HOH A 254 540 254 HOH HOH . C 3 HOH A 255 541 255 HOH HOH . C 3 HOH A 256 542 256 HOH HOH . C 3 HOH A 257 543 257 HOH HOH . C 3 HOH A 258 544 258 HOH HOH . C 3 HOH A 259 545 259 HOH HOH . C 3 HOH A 260 546 260 HOH HOH . C 3 HOH A 261 547 261 HOH HOH . C 3 HOH A 262 548 262 HOH HOH . C 3 HOH A 263 549 263 HOH HOH . C 3 HOH A 264 550 264 HOH HOH . C 3 HOH A 265 551 265 HOH HOH . C 3 HOH A 266 552 266 HOH HOH . C 3 HOH A 267 553 267 HOH HOH . C 3 HOH A 268 554 268 HOH HOH . C 3 HOH A 269 555 269 HOH HOH . C 3 HOH A 270 556 270 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N ASP . . . B 2 9.381 38.446 9.205 1 15.2 ? N ASP 1001 A 1 HETATM 2 C CA ASP . . . B 2 8.914 37.757 10.399 1 14.98 ? CA ASP 1001 A 1 HETATM 3 C C ASP . . . B 2 8.037 36.593 9.986 1 14.3 ? C ASP 1001 A 1 HETATM 4 O O ASP . . . B 2 7.282 36.074 10.814 1 14.88 ? O ASP 1001 A 1 HETATM 5 C CB ASP . . . B 2 8.119 38.705 11.303 1 15.47 ? CB ASP 1001 A 1 HETATM 6 C CG ASP . . . B 2 8.298 38.384 12.789 1 16.63 ? CG ASP 1001 A 1 HETATM 7 O OD1 ASP . . . B 2 9.437 38.118 13.211 1 18.14 ? OD1 ASP 1001 A 1 HETATM 8 O OD2 ASP . . . B 2 7.309 38.418 13.536 1 19.34 ? OD2 ASP 1001 A 1 HETATM 9 O OXT ASP . . . B 2 8.067 36.175 8.817 1 13.72 ? OXT ASP 1001 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 9 #