data_3OEZ # _model_server_result.job_id 1292wzpSk9MKpBJUiCFC8Q _model_server_result.datetime_utc '2024-11-24 11:25:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oez # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":534}' # _entry.id 3OEZ # _exptl.entry_id 3OEZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 79.16 _cell.angle_beta 90.02 _cell.angle_gamma 90.19 _cell.entry_id 3OEZ _cell.length_a 41.895 _cell.length_b 63.426 _cell.length_c 74.145 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OEZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 135 n n C1 C2 GOL sing 136 n n C1 H11 GOL sing 137 n n C1 H12 GOL sing 138 n n O1 HO1 GOL sing 139 n n C2 O2 GOL sing 140 n n C2 C3 GOL sing 141 n n C2 H2 GOL sing 142 n n O2 HO2 GOL sing 143 n n C3 O3 GOL sing 144 n n C3 H31 GOL sing 145 n n C3 H32 GOL sing 146 n n O3 HO3 GOL sing 147 n n # _atom_sites.entry_id 3OEZ _atom_sites.fract_transf_matrix[1][1] 0.023869 _atom_sites.fract_transf_matrix[1][2] 0.000079 _atom_sites.fract_transf_matrix[1][3] -0.000007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015766 _atom_sites.fract_transf_matrix[2][3] -0.003019 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013732 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 STI A 1 601 601 STI STI . D 3 ACT A 1 1 1 ACT ACT . E 4 GOL A 1 534 1 GOL CRY . F 2 STI B 1 601 601 STI STI . G 5 HOH A 1 2 2 HOH HOH . G 5 HOH A 2 3 3 HOH HOH . G 5 HOH A 3 8 8 HOH HOH . G 5 HOH A 4 9 9 HOH HOH . G 5 HOH A 5 11 11 HOH HOH . G 5 HOH A 6 14 14 HOH HOH . G 5 HOH A 7 15 15 HOH HOH . G 5 HOH A 8 20 20 HOH HOH . G 5 HOH A 9 21 21 HOH HOH . G 5 HOH A 10 23 23 HOH HOH . G 5 HOH A 11 26 26 HOH HOH . G 5 HOH A 12 27 27 HOH HOH . G 5 HOH A 13 28 28 HOH HOH . G 5 HOH A 14 32 32 HOH HOH . G 5 HOH A 15 33 33 HOH HOH . G 5 HOH A 16 35 35 HOH HOH . G 5 HOH A 17 36 36 HOH HOH . G 5 HOH A 18 37 37 HOH HOH . G 5 HOH A 19 38 38 HOH HOH . G 5 HOH A 20 39 39 HOH HOH . G 5 HOH A 21 40 40 HOH HOH . G 5 HOH A 22 42 42 HOH HOH . G 5 HOH A 23 44 44 HOH HOH . G 5 HOH A 24 48 48 HOH HOH . G 5 HOH A 25 50 50 HOH HOH . G 5 HOH A 26 52 52 HOH HOH . G 5 HOH A 27 53 53 HOH HOH . G 5 HOH A 28 54 54 HOH HOH . G 5 HOH A 29 55 55 HOH HOH . G 5 HOH A 30 57 57 HOH HOH . G 5 HOH A 31 58 58 HOH HOH . G 5 HOH A 32 59 59 HOH HOH . G 5 HOH A 33 61 61 HOH HOH . G 5 HOH A 34 62 62 HOH HOH . G 5 HOH A 35 64 64 HOH HOH . G 5 HOH A 36 65 65 HOH HOH . G 5 HOH A 37 70 70 HOH HOH . G 5 HOH A 38 73 73 HOH HOH . G 5 HOH A 39 78 78 HOH HOH . G 5 HOH A 40 79 79 HOH HOH . G 5 HOH A 41 81 81 HOH HOH . G 5 HOH A 42 83 83 HOH HOH . G 5 HOH A 43 84 84 HOH HOH . G 5 HOH A 44 85 85 HOH HOH . G 5 HOH A 45 91 91 HOH HOH . G 5 HOH A 46 92 92 HOH HOH . G 5 HOH A 47 94 94 HOH HOH . G 5 HOH A 48 95 95 HOH HOH . G 5 HOH A 49 96 96 HOH HOH . G 5 HOH A 50 98 98 HOH HOH . G 5 HOH A 51 104 104 HOH HOH . G 5 HOH A 52 106 106 HOH HOH . G 5 HOH A 53 107 107 HOH HOH . G 5 HOH A 54 108 108 HOH HOH . G 5 HOH A 55 111 111 HOH HOH . G 5 HOH A 56 113 113 HOH HOH . G 5 HOH A 57 114 114 HOH HOH . G 5 HOH A 58 117 117 HOH HOH . G 5 HOH A 59 124 124 HOH HOH . G 5 HOH A 60 125 125 HOH HOH . G 5 HOH A 61 127 127 HOH HOH . G 5 HOH A 62 129 129 HOH HOH . G 5 HOH A 63 131 131 HOH HOH . G 5 HOH A 64 133 133 HOH HOH . G 5 HOH A 65 135 135 HOH HOH . G 5 HOH A 66 136 136 HOH HOH . G 5 HOH A 67 137 137 HOH HOH . G 5 HOH A 68 138 138 HOH HOH . G 5 HOH A 69 139 139 HOH HOH . G 5 HOH A 70 140 140 HOH HOH . G 5 HOH A 71 142 142 HOH HOH . G 5 HOH A 72 144 144 HOH HOH . G 5 HOH A 73 145 145 HOH HOH . G 5 HOH A 74 147 147 HOH HOH . G 5 HOH A 75 148 148 HOH HOH . G 5 HOH A 76 149 149 HOH HOH . G 5 HOH A 77 150 150 HOH HOH . G 5 HOH A 78 151 151 HOH HOH . G 5 HOH A 79 152 152 HOH HOH . G 5 HOH A 80 153 153 HOH HOH . G 5 HOH A 81 154 154 HOH HOH . G 5 HOH A 82 155 155 HOH HOH . G 5 HOH A 83 156 156 HOH HOH . G 5 HOH A 84 157 157 HOH HOH . G 5 HOH A 85 159 159 HOH HOH . G 5 HOH A 86 163 163 HOH HOH . G 5 HOH A 87 164 164 HOH HOH . G 5 HOH A 88 165 165 HOH HOH . G 5 HOH A 89 166 166 HOH HOH . G 5 HOH A 90 167 167 HOH HOH . G 5 HOH A 91 168 168 HOH HOH . G 5 HOH A 92 169 169 HOH HOH . G 5 HOH A 93 170 170 HOH HOH . G 5 HOH A 94 171 171 HOH HOH . G 5 HOH A 95 172 172 HOH HOH . G 5 HOH A 96 173 173 HOH HOH . G 5 HOH A 97 174 174 HOH HOH . G 5 HOH A 98 175 175 HOH HOH . G 5 HOH A 99 176 176 HOH HOH . G 5 HOH A 100 177 177 HOH HOH . G 5 HOH A 101 178 178 HOH HOH . G 5 HOH A 102 180 180 HOH HOH . G 5 HOH A 103 181 181 HOH HOH . G 5 HOH A 104 182 182 HOH HOH . G 5 HOH A 105 183 183 HOH HOH . G 5 HOH A 106 184 184 HOH HOH . G 5 HOH A 107 185 185 HOH HOH . G 5 HOH A 108 186 186 HOH HOH . G 5 HOH A 109 187 187 HOH HOH . G 5 HOH A 110 188 188 HOH HOH . G 5 HOH A 111 189 189 HOH HOH . G 5 HOH A 112 190 190 HOH HOH . G 5 HOH A 113 191 191 HOH HOH . G 5 HOH A 114 192 192 HOH HOH . G 5 HOH A 115 193 193 HOH HOH . G 5 HOH A 116 194 194 HOH HOH . G 5 HOH A 117 195 195 HOH HOH . G 5 HOH A 118 232 232 HOH HOH . G 5 HOH A 119 233 233 HOH HOH . G 5 HOH A 120 234 234 HOH HOH . G 5 HOH A 121 235 235 HOH HOH . G 5 HOH A 122 236 236 HOH HOH . G 5 HOH A 123 237 237 HOH HOH . G 5 HOH A 124 238 238 HOH HOH . G 5 HOH A 125 239 239 HOH HOH . G 5 HOH A 126 240 240 HOH HOH . G 5 HOH A 127 242 242 HOH HOH . G 5 HOH A 128 243 243 HOH HOH . G 5 HOH A 129 244 244 HOH HOH . G 5 HOH A 130 246 246 HOH HOH . G 5 HOH A 131 247 247 HOH HOH . G 5 HOH A 132 535 248 HOH HOH . G 5 HOH A 133 536 249 HOH HOH . G 5 HOH A 134 537 251 HOH HOH . G 5 HOH A 135 538 253 HOH HOH . G 5 HOH A 136 539 254 HOH HOH . G 5 HOH A 137 540 255 HOH HOH . G 5 HOH A 138 541 256 HOH HOH . G 5 HOH A 139 542 257 HOH HOH . G 5 HOH A 140 543 258 HOH HOH . G 5 HOH A 141 544 259 HOH HOH . G 5 HOH A 142 545 260 HOH HOH . G 5 HOH A 143 546 261 HOH HOH . G 5 HOH A 144 547 262 HOH HOH . G 5 HOH A 145 548 263 HOH HOH . G 5 HOH A 146 549 264 HOH HOH . G 5 HOH A 147 550 265 HOH HOH . G 5 HOH A 148 551 271 HOH HOH . G 5 HOH A 149 553 268 HOH HOH . G 5 HOH A 150 554 269 HOH HOH . H 5 HOH B 1 1 1 HOH HOH . H 5 HOH B 2 4 4 HOH HOH . H 5 HOH B 3 5 5 HOH HOH . H 5 HOH B 4 6 6 HOH HOH . H 5 HOH B 5 7 7 HOH HOH . H 5 HOH B 6 10 10 HOH HOH . H 5 HOH B 7 12 12 HOH HOH . H 5 HOH B 8 13 13 HOH HOH . H 5 HOH B 9 16 16 HOH HOH . H 5 HOH B 10 17 17 HOH HOH . H 5 HOH B 11 18 18 HOH HOH . H 5 HOH B 12 19 19 HOH HOH . H 5 HOH B 13 22 22 HOH HOH . H 5 HOH B 14 24 24 HOH HOH . H 5 HOH B 15 25 25 HOH HOH . H 5 HOH B 16 29 29 HOH HOH . H 5 HOH B 17 30 30 HOH HOH . H 5 HOH B 18 31 31 HOH HOH . H 5 HOH B 19 34 34 HOH HOH . H 5 HOH B 20 41 41 HOH HOH . H 5 HOH B 21 43 43 HOH HOH . H 5 HOH B 22 45 45 HOH HOH . H 5 HOH B 23 46 46 HOH HOH . H 5 HOH B 24 47 47 HOH HOH . H 5 HOH B 25 49 49 HOH HOH . H 5 HOH B 26 51 51 HOH HOH . H 5 HOH B 27 56 56 HOH HOH . H 5 HOH B 28 60 60 HOH HOH . H 5 HOH B 29 63 63 HOH HOH . H 5 HOH B 30 66 66 HOH HOH . H 5 HOH B 31 67 67 HOH HOH . H 5 HOH B 32 68 68 HOH HOH . H 5 HOH B 33 69 69 HOH HOH . H 5 HOH B 34 71 71 HOH HOH . H 5 HOH B 35 72 72 HOH HOH . H 5 HOH B 36 74 74 HOH HOH . H 5 HOH B 37 75 75 HOH HOH . H 5 HOH B 38 76 76 HOH HOH . H 5 HOH B 39 77 77 HOH HOH . H 5 HOH B 40 80 80 HOH HOH . H 5 HOH B 41 82 82 HOH HOH . H 5 HOH B 42 86 86 HOH HOH . H 5 HOH B 43 87 87 HOH HOH . H 5 HOH B 44 88 88 HOH HOH . H 5 HOH B 45 89 89 HOH HOH . H 5 HOH B 46 90 90 HOH HOH . H 5 HOH B 47 93 93 HOH HOH . H 5 HOH B 48 97 97 HOH HOH . H 5 HOH B 49 99 99 HOH HOH . H 5 HOH B 50 100 100 HOH HOH . H 5 HOH B 51 101 101 HOH HOH . H 5 HOH B 52 102 102 HOH HOH . H 5 HOH B 53 103 103 HOH HOH . H 5 HOH B 54 105 105 HOH HOH . H 5 HOH B 55 109 109 HOH HOH . H 5 HOH B 56 110 110 HOH HOH . H 5 HOH B 57 112 112 HOH HOH . H 5 HOH B 58 115 115 HOH HOH . H 5 HOH B 59 116 116 HOH HOH . H 5 HOH B 60 118 118 HOH HOH . H 5 HOH B 61 119 119 HOH HOH . H 5 HOH B 62 120 120 HOH HOH . H 5 HOH B 63 121 121 HOH HOH . H 5 HOH B 64 122 122 HOH HOH . H 5 HOH B 65 123 123 HOH HOH . H 5 HOH B 66 126 126 HOH HOH . H 5 HOH B 67 128 128 HOH HOH . H 5 HOH B 68 130 130 HOH HOH . H 5 HOH B 69 132 132 HOH HOH . H 5 HOH B 70 134 134 HOH HOH . H 5 HOH B 71 141 141 HOH HOH . H 5 HOH B 72 143 143 HOH HOH . H 5 HOH B 73 146 146 HOH HOH . H 5 HOH B 74 158 158 HOH HOH . H 5 HOH B 75 160 160 HOH HOH . H 5 HOH B 76 161 161 HOH HOH . H 5 HOH B 77 162 162 HOH HOH . H 5 HOH B 78 179 179 HOH HOH . H 5 HOH B 79 196 196 HOH HOH . H 5 HOH B 80 197 197 HOH HOH . H 5 HOH B 81 198 198 HOH HOH . H 5 HOH B 82 199 199 HOH HOH . H 5 HOH B 83 200 200 HOH HOH . H 5 HOH B 84 201 201 HOH HOH . H 5 HOH B 85 202 202 HOH HOH . H 5 HOH B 86 203 203 HOH HOH . H 5 HOH B 87 204 204 HOH HOH . H 5 HOH B 88 205 205 HOH HOH . H 5 HOH B 89 206 206 HOH HOH . H 5 HOH B 90 207 207 HOH HOH . H 5 HOH B 91 208 208 HOH HOH . H 5 HOH B 92 209 209 HOH HOH . H 5 HOH B 93 210 210 HOH HOH . H 5 HOH B 94 211 211 HOH HOH . H 5 HOH B 95 212 212 HOH HOH . H 5 HOH B 96 213 213 HOH HOH . H 5 HOH B 97 214 214 HOH HOH . H 5 HOH B 98 215 215 HOH HOH . H 5 HOH B 99 216 216 HOH HOH . H 5 HOH B 100 217 217 HOH HOH . H 5 HOH B 101 218 218 HOH HOH . H 5 HOH B 102 219 219 HOH HOH . H 5 HOH B 103 220 220 HOH HOH . H 5 HOH B 104 221 221 HOH HOH . H 5 HOH B 105 222 222 HOH HOH . H 5 HOH B 106 223 223 HOH HOH . H 5 HOH B 107 224 224 HOH HOH . H 5 HOH B 108 225 225 HOH HOH . H 5 HOH B 109 226 226 HOH HOH . H 5 HOH B 110 227 227 HOH HOH . H 5 HOH B 111 228 228 HOH HOH . H 5 HOH B 112 229 229 HOH HOH . H 5 HOH B 113 230 230 HOH HOH . H 5 HOH B 114 231 231 HOH HOH . H 5 HOH B 115 245 245 HOH HOH . H 5 HOH B 116 534 270 HOH HOH . H 5 HOH B 117 535 289 HOH HOH . H 5 HOH B 118 536 272 HOH HOH . H 5 HOH B 119 537 273 HOH HOH . H 5 HOH B 120 538 274 HOH HOH . H 5 HOH B 121 539 275 HOH HOH . H 5 HOH B 122 540 276 HOH HOH . H 5 HOH B 123 541 277 HOH HOH . H 5 HOH B 124 542 278 HOH HOH . H 5 HOH B 125 543 279 HOH HOH . H 5 HOH B 126 544 280 HOH HOH . H 5 HOH B 127 545 281 HOH HOH . H 5 HOH B 128 546 282 HOH HOH . H 5 HOH B 129 547 283 HOH HOH . H 5 HOH B 130 548 284 HOH HOH . H 5 HOH B 131 549 285 HOH HOH . H 5 HOH B 132 550 288 HOH HOH . H 5 HOH B 133 551 266 HOH HOH . H 5 HOH B 134 552 267 HOH HOH . H 5 HOH B 135 553 291 HOH HOH . H 5 HOH B 136 554 292 HOH HOH . H 5 HOH B 137 555 294 HOH HOH . H 5 HOH B 138 556 295 HOH HOH . H 5 HOH B 139 557 290 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -15.081 12.958 11.005 1 37.56 ? C1 GOL 534 A 1 HETATM 2 O O1 GOL . . . E 4 -15.649 12.225 12.063 1 43.12 ? O1 GOL 534 A 1 HETATM 3 C C2 GOL . . . E 4 -14.602 11.905 9.993 1 37.78 ? C2 GOL 534 A 1 HETATM 4 O O2 GOL . . . E 4 -15.684 11.651 9.157 1 45.38 ? O2 GOL 534 A 1 HETATM 5 C C3 GOL . . . E 4 -13.439 12.525 9.188 1 31.94 ? C3 GOL 534 A 1 HETATM 6 O O3 GOL . . . E 4 -13.261 11.69 8.072 1 39.13 ? O3 GOL 534 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #