data_3OG7 # _model_server_result.job_id zblzXvPA6JBXEP3CBFImhQ _model_server_result.datetime_utc '2024-11-21 16:50:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3og7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3OG7 # _exptl.entry_id 3OG7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.922 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane-1-sulfonamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OG7 _cell.length_a 50.77 _cell.length_b 104.424 _cell.length_c 110.128 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OG7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H18 Cl F2 N3 O3 S' _chem_comp.formula_weight 489.922 _chem_comp.id 032 _chem_comp.mon_nstd_flag . _chem_comp.name N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorophenyl)propane-1-sulfonamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Vemurafenib;PLX4032 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C10 C09 032 doub 1 n y C10 C11 032 sing 2 n y C10 CL13 032 sing 3 n n C15 N14 032 sing 4 n y C15 C16 032 doub 5 n y C15 H15 032 sing 6 n n C17 C16 032 sing 7 n n C17 C18 032 sing 8 n n C17 O19 032 doub 9 n n C20 C21 032 doub 10 n y C20 C18 032 sing 11 n y C20 F26 032 sing 12 n n C21 C22 032 sing 13 n y C21 N27 032 sing 14 n n C22 C23 032 doub 15 n y C22 H22 032 sing 16 n n C24 C18 032 doub 17 n y C24 C23 032 sing 18 n y C24 F25 032 sing 19 n n C01 C02 032 doub 20 n y C01 C04 032 sing 21 n y C01 C07 032 sing 22 n y C02 N03 032 sing 23 n y C02 H02 032 sing 24 n n N03 C06 032 doub 25 n y C04 C05 032 doub 26 n y C04 H04 032 sing 27 n n N14 C06 032 sing 28 n y N14 H18 032 sing 29 n n C16 C05 032 sing 30 n y C05 C06 032 sing 31 n y C07 C08 032 doub 32 n y C07 C12 032 sing 33 n y C23 H23 032 sing 34 n n N27 S28 032 sing 35 n n N27 HN27 032 sing 36 n n S28 O29 032 doub 37 n n S28 O30 032 doub 38 n n S28 C31 032 sing 39 n n C31 C32 032 sing 40 n n C31 H31 032 sing 41 n n C31 H31A 032 sing 42 n n C32 C33 032 sing 43 n n C32 H32 032 sing 44 n n C32 H32A 032 sing 45 n n C33 H33 032 sing 46 n n C33 H33A 032 sing 47 n n C33 H33B 032 sing 48 n n C08 C09 032 sing 49 n y C08 H08 032 sing 50 n n C09 H09 032 sing 51 n n C11 C12 032 doub 52 n y C11 H11 032 sing 53 n n C12 H12 032 sing 54 n n # _atom_sites.entry_id 3OG7 _atom_sites.fract_transf_matrix[1][1] 0.019697 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009576 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 032 A 1 1 1 032 032 . D 3 HOH A 1 2 2 HOH HOH . D 3 HOH A 2 3 3 HOH HOH . D 3 HOH A 3 4 4 HOH HOH . D 3 HOH A 4 6 6 HOH HOH . D 3 HOH A 5 8 8 HOH HOH . D 3 HOH A 6 9 9 HOH HOH . D 3 HOH A 7 10 10 HOH HOH . D 3 HOH A 8 11 11 HOH HOH . D 3 HOH A 9 12 12 HOH HOH . D 3 HOH A 10 14 14 HOH HOH . D 3 HOH A 11 16 16 HOH HOH . D 3 HOH A 12 18 18 HOH HOH . D 3 HOH A 13 20 20 HOH HOH . D 3 HOH A 14 21 21 HOH HOH . D 3 HOH A 15 22 22 HOH HOH . D 3 HOH A 16 24 24 HOH HOH . D 3 HOH A 17 27 27 HOH HOH . D 3 HOH A 18 30 30 HOH HOH . D 3 HOH A 19 31 31 HOH HOH . D 3 HOH A 20 33 33 HOH HOH . D 3 HOH A 21 34 34 HOH HOH . D 3 HOH A 22 35 35 HOH HOH . D 3 HOH A 23 36 36 HOH HOH . D 3 HOH A 24 37 37 HOH HOH . D 3 HOH A 25 38 38 HOH HOH . D 3 HOH A 26 39 39 HOH HOH . D 3 HOH A 27 41 41 HOH HOH . D 3 HOH A 28 42 42 HOH HOH . D 3 HOH A 29 43 43 HOH HOH . D 3 HOH A 30 44 44 HOH HOH . D 3 HOH A 31 45 45 HOH HOH . D 3 HOH A 32 48 48 HOH HOH . D 3 HOH A 33 50 50 HOH HOH . D 3 HOH A 34 51 51 HOH HOH . D 3 HOH A 35 52 52 HOH HOH . D 3 HOH A 36 54 54 HOH HOH . D 3 HOH A 37 55 55 HOH HOH . D 3 HOH A 38 60 60 HOH HOH . D 3 HOH A 39 62 62 HOH HOH . D 3 HOH A 40 63 63 HOH HOH . D 3 HOH A 41 65 65 HOH HOH . E 3 HOH B 1 1 1 HOH HOH . E 3 HOH B 2 5 5 HOH HOH . E 3 HOH B 3 7 7 HOH HOH . E 3 HOH B 4 13 13 HOH HOH . E 3 HOH B 5 15 15 HOH HOH . E 3 HOH B 6 17 17 HOH HOH . E 3 HOH B 7 19 19 HOH HOH . E 3 HOH B 8 23 23 HOH HOH . E 3 HOH B 9 25 25 HOH HOH . E 3 HOH B 10 26 26 HOH HOH . E 3 HOH B 11 28 28 HOH HOH . E 3 HOH B 12 29 29 HOH HOH . E 3 HOH B 13 32 32 HOH HOH . E 3 HOH B 14 40 40 HOH HOH . E 3 HOH B 15 46 46 HOH HOH . E 3 HOH B 16 47 47 HOH HOH . E 3 HOH B 17 49 49 HOH HOH . E 3 HOH B 18 53 53 HOH HOH . E 3 HOH B 19 56 56 HOH HOH . E 3 HOH B 20 57 57 HOH HOH . E 3 HOH B 21 58 58 HOH HOH . E 3 HOH B 22 59 59 HOH HOH . E 3 HOH B 23 61 61 HOH HOH . E 3 HOH B 24 64 64 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 032 . . . C 2 9.454 -4.176 -21.735 1 58.37 ? C10 032 1 A 1 HETATM 2 C C15 032 . . . C 2 1.934 -1.231 -18.357 1 37.5 ? C15 032 1 A 1 HETATM 3 C C17 032 . . . C 2 1.516 -2.316 -20.597 1 34.06 ? C17 032 1 A 1 HETATM 4 C C20 032 . . . C 2 -0.845 -3.053 -20.418 1 26.22 ? C20 032 1 A 1 HETATM 5 C C21 032 . . . C 2 -2.207 -2.778 -20.374 1 27.3 ? C21 032 1 A 1 HETATM 6 C C22 032 . . . C 2 -2.658 -1.461 -20.469 1 29.56 ? C22 032 1 A 1 HETATM 7 C C24 032 . . . C 2 -0.387 -0.72 -20.649 1 34.82 ? C24 032 1 A 1 HETATM 8 C C01 032 . . . C 2 6.13 -2.562 -19.577 1 50.16 ? C01 032 1 A 1 HETATM 9 C C02 032 . . . C 2 6.309 -1.953 -18.333 1 46.22 ? C02 032 1 A 1 HETATM 10 N N03 032 . . . C 2 5.354 -1.393 -17.558 1 44.65 ? N03 032 1 A 1 HETATM 11 C C04 032 . . . C 2 4.825 -2.607 -20.089 1 44.14 ? C04 032 1 A 1 HETATM 12 N N14 032 . . . C 2 2.999 -0.988 -17.535 1 34.94 ? N14 032 1 A 1 HETATM 13 C C16 032 . . . C 2 2.365 -1.886 -19.491 1 37.77 ? C16 032 1 A 1 HETATM 14 C C05 032 . . . C 2 3.781 -2.044 -19.335 1 42.71 ? C05 032 1 A 1 HETATM 15 C C06 032 . . . C 2 4.133 -1.474 -18.114 1 40.72 ? C06 032 1 A 1 HETATM 16 C C07 032 . . . C 2 7.269 -3.124 -20.317 1 54.29 ? C07 032 1 A 1 HETATM 17 C C18 032 . . . C 2 0.073 -2.029 -20.549 1 35.44 ? C18 032 1 A 1 HETATM 18 C C23 032 . . . C 2 -1.742 -0.42 -20.608 1 24.63 ? C23 032 1 A 1 HETATM 19 F F25 032 . . . C 2 0.477 0.287 -20.782 1 32.98 ? F25 032 1 A 1 HETATM 20 F F26 032 . . . C 2 -0.426 -4.317 -20.325 1 41.15 ? F26 032 1 A 1 HETATM 21 N N27 032 . . . C 2 -3.116 -3.877 -20.23 1 36.57 ? N27 032 1 A 1 HETATM 22 S S28 032 . . . C 2 -4.803 -3.571 -20.163 1 52.02 ? S28 032 1 A 1 HETATM 23 O O29 032 . . . C 2 -5.51 -4.828 -20.031 1 58.84 ? O29 032 1 A 1 HETATM 24 O O30 032 . . . C 2 -5.206 -2.598 -21.157 1 46.68 ? O30 032 1 A 1 HETATM 25 C C31 032 . . . C 2 -4.997 -2.774 -18.571 1 50.34 ? C31 032 1 A 1 HETATM 26 C C32 032 . . . C 2 -5.016 -3.72 -17.378 1 45.84 ? C32 032 1 A 1 HETATM 27 C C33 032 . . . C 2 -4.277 -3.096 -16.205 1 36.76 ? C33 032 1 A 1 HETATM 28 C C08 032 . . . C 2 7.146 -4.319 -21.047 1 58.69 ? C08 032 1 A 1 HETATM 29 C C09 032 . . . C 2 8.232 -4.846 -21.751 1 62.06 ? C09 032 1 A 1 HETATM 30 C C11 032 . . . C 2 9.603 -2.986 -21.024 1 48.54 ? C11 032 1 A 1 HETATM 31 C C12 032 . . . C 2 8.514 -2.465 -20.323 1 48.21 ? C12 032 1 A 1 HETATM 32 CL CL13 032 . . . C 2 10.795 -4.82 -22.601 1 67.34 ? CL13 032 1 A 1 HETATM 33 O O19 032 . . . C 2 1.942 -2.898 -21.592 1 44.03 ? O19 032 1 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 37 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 33 #