data_3OGM
#
_model_server_result.job_id            eEF7QNHFRiEiRIKDGRSbJw 
_model_server_result.datetime_utc      '2025-03-06 08:36:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ogm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"WA","auth_seq_id":6100}' 
#
_entry.id    3OGM 
#
_exptl.entry_id    3OGM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              321.411 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.45 
_cell.angle_gamma         90 
_cell.entry_id            3OGM 
_cell.length_a            123.17 
_cell.length_b            220.758 
_cell.length_c            149.54 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OGM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
PISA trimeric 3 author_and_software_defined_assembly 3 
PISA trimeric 3 author_and_software_defined_assembly 4 
PISA trimeric 3 author_and_software_defined_assembly 5 
PISA trimeric 3 author_and_software_defined_assembly 6 
PISA trimeric 3 author_and_software_defined_assembly 7 
PISA dimeric 2 author_and_software_defined_assembly 8 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,X,Y,Z,AA,BA 1 1 
D,E,F,CA,DA,EA,FA,GA 2 1 
G,H,I,HA,IA,JA,KA,LA 3 1 
U,V,W,GB,HB,IB,JB,KB 4 1 
L,M,N,RA,SA,TA,UA,VA 5 1 
O,P,Q,WA,XA,YA,ZA,AB 6 1 
R,S,T,BB,CB,DB,EB,FB 7 1 
J,K,MA,NA,OA,PA,QA 8 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 X N N 
? 4 CA N N 
? 4 HA N N 
? 4 MA N N 
? 4 RA N N 
? 4 WA N N 
? 4 BB N N 
? 4 GB N N 
#
_chem_comp.formula           'C18 H27 N O4' 
_chem_comp.formula_weight    321.411 
_chem_comp.id                OGK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Coronatine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 H01 OGK sing 235 n n 
C01 H01A OGK sing 236 n n 
C02 C01 OGK sing 237 n n 
C02 H02 OGK sing 238 n n 
C03 C02 OGK sing 239 n n 
C03 C23 OGK sing 240 n n 
C03 H03 OGK sing 241 n n 
C04 C03 OGK sing 242 n n 
C04 H04 OGK sing 243 n n 
C04 H04A OGK sing 244 n n 
C05 C04 OGK sing 245 n n 
C05 H05 OGK sing 246 n n 
C06 C05 OGK sing 247 n n 
O07 C06 OGK doub 248 n n 
N08 C06 OGK sing 249 n n 
N08 HN08 OGK sing 250 n n 
C09 N08 OGK sing 251 n n 
C09 C14 OGK sing 252 n n 
C09 C13 OGK sing 253 n n 
C10 C09 OGK sing 254 n n 
O11 C10 OGK doub 255 n n 
O12 C10 OGK sing 256 n n 
O12 HO12 OGK sing 257 n n 
C13 H13 OGK sing 258 n n 
C13 H13A OGK sing 259 n n 
C14 C13 OGK sing 260 n n 
C14 H14 OGK sing 261 n n 
C15 C14 OGK sing 262 n n 
C15 C16 OGK sing 263 n n 
C15 H15 OGK sing 264 n n 
C15 H15A OGK sing 265 n n 
C16 H16 OGK sing 266 n n 
C16 H16A OGK sing 267 n n 
C16 H16B OGK sing 268 n n 
C17 C05 OGK sing 269 n n 
C17 C22 OGK sing 270 n n 
C17 C18 OGK sing 271 n n 
C17 H17 OGK sing 272 n n 
C18 C19 OGK sing 273 n n 
C18 H18 OGK sing 274 n n 
C18 H18A OGK sing 275 n n 
C19 H19 OGK sing 276 n n 
C19 H19A OGK sing 277 n n 
C20 C19 OGK sing 278 n n 
C20 O21 OGK doub 279 n n 
C22 C20 OGK sing 280 n n 
C22 C23 OGK sing 281 n n 
C22 H22 OGK sing 282 n n 
C23 H23 OGK sing 283 n n 
C23 H23A OGK sing 284 n n 
C01 H26 OGK sing 285 n n 
C02 H27 OGK sing 286 n n 
#
_atom_sites.entry_id                     3OGM 
_atom_sites.fract_transf_matrix[1][1]    0.008119 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002092 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00453 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006906 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
X 4 OGK B 1 1100 1100 OGK OGK . 
Y 5 PO4 B 1 1101 1101 PO4 PO4 . 
Z 5 PO4 B 1 1102 1102 PO4 PO4 . 
AA 5 PO4 B 1 1103 1103 PO4 PO4 . 
BA 5 PO4 B 1 1104 1104 PO4 PO4 . 
CA 4 OGK D 1 2100 2100 OGK OGK . 
DA 5 PO4 D 1 1101 1101 PO4 PO4 . 
EA 5 PO4 D 1 1102 1102 PO4 PO4 . 
FA 5 PO4 D 1 1103 1103 PO4 PO4 . 
GA 5 PO4 D 1 1104 1104 PO4 PO4 . 
HA 4 OGK F 1 3100 3100 OGK OGK . 
IA 5 PO4 F 1 1101 1101 PO4 PO4 . 
JA 5 PO4 F 1 1102 1102 PO4 PO4 . 
KA 5 PO4 F 1 1103 1103 PO4 PO4 . 
LA 5 PO4 F 1 1104 1104 PO4 PO4 . 
MA 4 OGK H 1 4100 4100 OGK OGK . 
NA 5 PO4 H 1 1101 1101 PO4 PO4 . 
OA 5 PO4 H 1 1102 1102 PO4 PO4 . 
PA 5 PO4 H 1 1103 1103 PO4 PO4 . 
QA 5 PO4 H 1 1104 1104 PO4 PO4 . 
RA 4 OGK J 1 5100 5100 OGK OGK . 
SA 5 PO4 J 1 1101 1101 PO4 PO4 . 
TA 5 PO4 J 1 1102 1102 PO4 PO4 . 
UA 5 PO4 J 1 1103 1103 PO4 PO4 . 
VA 5 PO4 J 1 1104 1104 PO4 PO4 . 
WA 4 OGK L 1 6100 6100 OGK OGK . 
XA 5 PO4 L 1 1101 1101 PO4 PO4 . 
YA 5 PO4 L 1 1102 1102 PO4 PO4 . 
ZA 5 PO4 L 1 1103 1103 PO4 PO4 . 
AB 5 PO4 L 1 1104 1104 PO4 PO4 . 
BB 4 OGK N 1 7100 7100 OGK OGK . 
CB 5 PO4 N 1 1101 1101 PO4 PO4 . 
DB 5 PO4 N 1 1102 1102 PO4 PO4 . 
EB 5 PO4 N 1 1103 1103 PO4 PO4 . 
FB 5 PO4 N 1 1104 1104 PO4 PO4 . 
GB 4 OGK P 1 8100 8100 OGK OGK . 
HB 5 PO4 P 1 1101 1101 PO4 PO4 . 
IB 5 PO4 P 1 1102 1102 PO4 PO4 . 
JB 5 PO4 P 1 1103 1103 PO4 PO4 . 
KB 5 PO4 P 1 1104 1104 PO4 PO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 OGK . . . WA 4 -67.206 -53.861 26.231 1 71.23 ? C01 OGK 6100 L 1 
HETATM 2 C C02 OGK . . . WA 4 -68.526 -53.08 26.251 1 67.65 ? C02 OGK 6100 L 1 
HETATM 3 C C03 OGK . . . WA 4 -69.268 -52.902 27.596 1 62.09 ? C03 OGK 6100 L 1 
HETATM 4 C C04 OGK . . . WA 4 -70.084 -51.637 27.492 1 68.22 ? C04 OGK 6100 L 1 
HETATM 5 C C05 OGK . . . WA 4 -71.44 -51.55 28.178 1 71.92 ? C05 OGK 6100 L 1 
HETATM 6 C C06 OGK . . . WA 4 -72.228 -50.205 28.126 1 73.9 ? C06 OGK 6100 L 1 
HETATM 7 O O07 OGK . . . WA 4 -71.663 -49.177 27.968 1 72.88 ? O07 OGK 6100 L 1 
HETATM 8 N N08 OGK . . . WA 4 -73.63 -50.17 28.573 1 81.22 ? N08 OGK 6100 L 1 
HETATM 9 C C09 OGK . . . WA 4 -74.394 -48.879 28.622 1 92.28 ? C09 OGK 6100 L 1 
HETATM 10 C C10 OGK . . . WA 4 -74.061 -48.132 29.419 1 92.53 ? C10 OGK 6100 L 1 
HETATM 11 O O11 OGK . . . WA 4 -73.661 -48.533 30.478 1 89.5 ? O11 OGK 6100 L 1 
HETATM 12 O O12 OGK . . . WA 4 -73.793 -46.783 29.05 1 74.89 ? O12 OGK 6100 L 1 
HETATM 13 C C13 OGK . . . WA 4 -74.727 -48.432 27.47 1 86.47 ? C13 OGK 6100 L 1 
HETATM 14 C C14 OGK . . . WA 4 -75.643 -49.072 28.179 1 90.13 ? C14 OGK 6100 L 1 
HETATM 15 C C15 OGK . . . WA 4 -76.452 -48.307 29.262 1 88.02 ? C15 OGK 6100 L 1 
HETATM 16 C C16 OGK . . . WA 4 -77.959 -48.617 29.316 1 78.37 ? C16 OGK 6100 L 1 
HETATM 17 C C17 OGK . . . WA 4 -71.874 -52.628 29.214 1 70.73 ? C17 OGK 6100 L 1 
HETATM 18 C C18 OGK . . . WA 4 -73.237 -52.926 28.795 1 69.08 ? C18 OGK 6100 L 1 
HETATM 19 C C19 OGK . . . WA 4 -73.507 -54.41 29.135 1 62.23 ? C19 OGK 6100 L 1 
HETATM 20 C C20 OGK . . . WA 4 -72.129 -55.027 29.286 1 69.38 ? C20 OGK 6100 L 1 
HETATM 21 O O21 OGK . . . WA 4 -71.915 -56.135 29.658 1 72.4 ? O21 OGK 6100 L 1 
HETATM 22 C C22 OGK . . . WA 4 -71.089 -53.925 29.15 1 71.89 ? C22 OGK 6100 L 1 
HETATM 23 C C23 OGK . . . WA 4 -70.188 -54.104 27.857 1 68.04 ? C23 OGK 6100 L 1 
#
_model_server_stats.io_time_ms              18 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#