data_3OGM
#
_model_server_result.job_id            trojuW3V8k4x93zs9iNEsA 
_model_server_result.datetime_utc      '2025-09-05 21:31:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3ogm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"BB","auth_seq_id":7100}' 
#
_entry.id    3OGM 
#
_exptl.entry_id    3OGM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              321.411 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          104.45 
_cell.angle_gamma         90 
_cell.entry_id            3OGM 
_cell.length_a            123.17 
_cell.length_b            220.758 
_cell.length_c            149.54 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OGM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
PISA trimeric 3 author_and_software_defined_assembly 3 
PISA trimeric 3 author_and_software_defined_assembly 4 
PISA trimeric 3 author_and_software_defined_assembly 5 
PISA trimeric 3 author_and_software_defined_assembly 6 
PISA trimeric 3 author_and_software_defined_assembly 7 
PISA dimeric 2 author_and_software_defined_assembly 8 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,X,Y,Z,AA,BA 1 1 
D,E,F,CA,DA,EA,FA,GA 2 1 
G,H,I,HA,IA,JA,KA,LA 3 1 
U,V,W,GB,HB,IB,JB,KB 4 1 
L,M,N,RA,SA,TA,UA,VA 5 1 
O,P,Q,WA,XA,YA,ZA,AB 6 1 
R,S,T,BB,CB,DB,EB,FB 7 1 
J,K,MA,NA,OA,PA,QA 8 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 X N N 
? 4 CA N N 
? 4 HA N N 
? 4 MA N N 
? 4 RA N N 
? 4 WA N N 
? 4 BB N N 
? 4 GB N N 
#
_chem_comp.formula           'C18 H27 N O4' 
_chem_comp.formula_weight    321.411 
_chem_comp.id                OGK 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(1S,2S)-2-ethyl-1-({[(3aS,4S,6R,7aS)-6-ethyl-1-oxooctahydro-1H-inden-4-yl]carbonyl}amino)cyclopropanecarboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Coronatine 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C01 H01 OGK sing 235 n n 
C01 H01A OGK sing 236 n n 
C02 C01 OGK sing 237 n n 
C02 H02 OGK sing 238 n n 
C03 C02 OGK sing 239 n n 
C03 C23 OGK sing 240 n n 
C03 H03 OGK sing 241 n n 
C04 C03 OGK sing 242 n n 
C04 H04 OGK sing 243 n n 
C04 H04A OGK sing 244 n n 
C05 C04 OGK sing 245 n n 
C05 H05 OGK sing 246 n n 
C06 C05 OGK sing 247 n n 
O07 C06 OGK doub 248 n n 
N08 C06 OGK sing 249 n n 
N08 HN08 OGK sing 250 n n 
C09 N08 OGK sing 251 n n 
C09 C14 OGK sing 252 n n 
C09 C13 OGK sing 253 n n 
C10 C09 OGK sing 254 n n 
O11 C10 OGK doub 255 n n 
O12 C10 OGK sing 256 n n 
O12 HO12 OGK sing 257 n n 
C13 H13 OGK sing 258 n n 
C13 H13A OGK sing 259 n n 
C14 C13 OGK sing 260 n n 
C14 H14 OGK sing 261 n n 
C15 C14 OGK sing 262 n n 
C15 C16 OGK sing 263 n n 
C15 H15 OGK sing 264 n n 
C15 H15A OGK sing 265 n n 
C16 H16 OGK sing 266 n n 
C16 H16A OGK sing 267 n n 
C16 H16B OGK sing 268 n n 
C17 C05 OGK sing 269 n n 
C17 C22 OGK sing 270 n n 
C17 C18 OGK sing 271 n n 
C17 H17 OGK sing 272 n n 
C18 C19 OGK sing 273 n n 
C18 H18 OGK sing 274 n n 
C18 H18A OGK sing 275 n n 
C19 H19 OGK sing 276 n n 
C19 H19A OGK sing 277 n n 
C20 C19 OGK sing 278 n n 
C20 O21 OGK doub 279 n n 
C22 C20 OGK sing 280 n n 
C22 C23 OGK sing 281 n n 
C22 H22 OGK sing 282 n n 
C23 H23 OGK sing 283 n n 
C23 H23A OGK sing 284 n n 
C01 H26 OGK sing 285 n n 
C02 H27 OGK sing 286 n n 
#
_atom_sites.entry_id                     3OGM 
_atom_sites.fract_transf_matrix[1][1]    0.008119 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002092 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00453 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006906 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
X 4 OGK B 1 1100 1100 OGK OGK . 
Y 5 PO4 B 1 1101 1101 PO4 PO4 . 
Z 5 PO4 B 1 1102 1102 PO4 PO4 . 
AA 5 PO4 B 1 1103 1103 PO4 PO4 . 
BA 5 PO4 B 1 1104 1104 PO4 PO4 . 
CA 4 OGK D 1 2100 2100 OGK OGK . 
DA 5 PO4 D 1 1101 1101 PO4 PO4 . 
EA 5 PO4 D 1 1102 1102 PO4 PO4 . 
FA 5 PO4 D 1 1103 1103 PO4 PO4 . 
GA 5 PO4 D 1 1104 1104 PO4 PO4 . 
HA 4 OGK F 1 3100 3100 OGK OGK . 
IA 5 PO4 F 1 1101 1101 PO4 PO4 . 
JA 5 PO4 F 1 1102 1102 PO4 PO4 . 
KA 5 PO4 F 1 1103 1103 PO4 PO4 . 
LA 5 PO4 F 1 1104 1104 PO4 PO4 . 
MA 4 OGK H 1 4100 4100 OGK OGK . 
NA 5 PO4 H 1 1101 1101 PO4 PO4 . 
OA 5 PO4 H 1 1102 1102 PO4 PO4 . 
PA 5 PO4 H 1 1103 1103 PO4 PO4 . 
QA 5 PO4 H 1 1104 1104 PO4 PO4 . 
RA 4 OGK J 1 5100 5100 OGK OGK . 
SA 5 PO4 J 1 1101 1101 PO4 PO4 . 
TA 5 PO4 J 1 1102 1102 PO4 PO4 . 
UA 5 PO4 J 1 1103 1103 PO4 PO4 . 
VA 5 PO4 J 1 1104 1104 PO4 PO4 . 
WA 4 OGK L 1 6100 6100 OGK OGK . 
XA 5 PO4 L 1 1101 1101 PO4 PO4 . 
YA 5 PO4 L 1 1102 1102 PO4 PO4 . 
ZA 5 PO4 L 1 1103 1103 PO4 PO4 . 
AB 5 PO4 L 1 1104 1104 PO4 PO4 . 
BB 4 OGK N 1 7100 7100 OGK OGK . 
CB 5 PO4 N 1 1101 1101 PO4 PO4 . 
DB 5 PO4 N 1 1102 1102 PO4 PO4 . 
EB 5 PO4 N 1 1103 1103 PO4 PO4 . 
FB 5 PO4 N 1 1104 1104 PO4 PO4 . 
GB 4 OGK P 1 8100 8100 OGK OGK . 
HB 5 PO4 P 1 1101 1101 PO4 PO4 . 
IB 5 PO4 P 1 1102 1102 PO4 PO4 . 
JB 5 PO4 P 1 1103 1103 PO4 PO4 . 
KB 5 PO4 P 1 1104 1104 PO4 PO4 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 OGK . . . BB 4 21.753 -22.41 -35.485 1 65.92 ? C01 OGK 7100 N 1 
HETATM 2 C C02 OGK . . . BB 4 22.38 -23.756 -35.09 1 69.45 ? C02 OGK 7100 N 1 
HETATM 3 C C03 OGK . . . BB 4 22.858 -23.969 -33.623 1 71.9 ? C03 OGK 7100 N 1 
HETATM 4 C C04 OGK . . . BB 4 22.734 -25.439 -33.269 1 68.92 ? C04 OGK 7100 N 1 
HETATM 5 C C05 OGK . . . BB 4 23.818 -26.061 -32.393 1 73.09 ? C05 OGK 7100 N 1 
HETATM 6 C C06 OGK . . . BB 4 23.673 -27.557 -32.017 1 80.46 ? C06 OGK 7100 N 1 
HETATM 7 O O07 OGK . . . BB 4 22.599 -28.067 -32.066 1 80.79 ? O07 OGK 7100 N 1 
HETATM 8 N N08 OGK . . . BB 4 24.792 -28.214 -31.303 1 86.74 ? N08 OGK 7100 N 1 
HETATM 9 C C09 OGK . . . BB 4 24.641 -29.645 -30.87 1 104.99 ? C09 OGK 7100 N 1 
HETATM 10 C C10 OGK . . . BB 4 23.92 -29.812 -29.984 1 103.31 ? C10 OGK 7100 N 1 
HETATM 11 O O11 OGK . . . BB 4 23.859 -28.957 -29.116 1 87.06 ? O11 OGK 7100 N 1 
HETATM 12 O O12 OGK . . . BB 4 22.903 -30.833 -30.103 1 79.54 ? O12 OGK 7100 N 1 
HETATM 13 C C13 OGK . . . BB 4 24.637 -30.49 -31.845 1 93.68 ? C13 OGK 7100 N 1 
HETATM 14 C C14 OGK . . . BB 4 25.766 -30.331 -31.151 1 100.4 ? C14 OGK 7100 N 1 
HETATM 15 C C15 OGK . . . BB 4 26.008 -31.078 -29.795 1 95.39 ? C15 OGK 7100 N 1 
HETATM 16 C C16 OGK . . . BB 4 27.414 -31.667 -29.539 1 78.19 ? C16 OGK 7100 N 1 
HETATM 17 C C17 OGK . . . BB 4 24.767 -25.185 -31.507 1 70.96 ? C17 OGK 7100 N 1 
HETATM 18 C C18 OGK . . . BB 4 26.037 -25.859 -31.703 1 71.06 ? C18 OGK 7100 N 1 
HETATM 19 C C19 OGK . . . BB 4 27.11 -24.737 -31.678 1 79.32 ? C19 OGK 7100 N 1 
HETATM 20 C C20 OGK . . . BB 4 26.377 -23.403 -31.861 1 83.65 ? C20 OGK 7100 N 1 
HETATM 21 O O21 OGK . . . BB 4 26.876 -22.3 -31.815 1 80.99 ? O21 OGK 7100 N 1 
HETATM 22 C C22 OGK . . . BB 4 24.89 -23.736 -31.972 1 77.55 ? C22 OGK 7100 N 1 
HETATM 23 C C23 OGK . . . BB 4 24.309 -23.481 -33.44 1 72.78 ? C23 OGK 7100 N 1 
#
_model_server_stats.io_time_ms              24 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    58 
_model_server_stats.query_time_ms           357 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           23 
#