data_3OGP # _model_server_result.job_id T95YoFyX5qPg2uBeqrqs_A _model_server_result.datetime_utc '2025-02-16 12:44:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ogp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":200}' # _entry.id 3OGP # _exptl.entry_id 3OGP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3OGP _cell.length_a 81.17 _cell.length_b 81.17 _cell.length_c 33.59 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OGP _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 3OGP _atom_sites.fract_transf_matrix[1][1] 0.01232 _atom_sites.fract_transf_matrix[1][2] 0.007113 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014226 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.029771 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 A 1 200 200 017 017 . D 3 DMS A 1 202 202 DMS DMS . E 2 017 B 1 200 200 017 017 . F 4 HOH A 1 204 204 HOH HOH . F 4 HOH A 2 301 301 HOH HOH . F 4 HOH A 3 302 302 HOH HOH . F 4 HOH A 4 303 303 HOH HOH . F 4 HOH A 5 304 304 HOH HOH . F 4 HOH A 6 305 305 HOH HOH . F 4 HOH A 7 306 306 HOH HOH . F 4 HOH A 8 308 308 HOH HOH . F 4 HOH A 9 309 309 HOH HOH . F 4 HOH A 10 310 310 HOH HOH . F 4 HOH A 11 311 311 HOH HOH . F 4 HOH A 12 313 313 HOH HOH . F 4 HOH A 13 315 315 HOH HOH . F 4 HOH A 14 317 317 HOH HOH . F 4 HOH A 15 320 320 HOH HOH . F 4 HOH A 16 323 323 HOH HOH . F 4 HOH A 17 324 324 HOH HOH . F 4 HOH A 18 329 329 HOH HOH . F 4 HOH A 19 330 330 HOH HOH . F 4 HOH A 20 331 331 HOH HOH . F 4 HOH A 21 333 333 HOH HOH . F 4 HOH A 22 335 335 HOH HOH . F 4 HOH A 23 336 336 HOH HOH . F 4 HOH A 24 338 338 HOH HOH . F 4 HOH A 25 339 339 HOH HOH . F 4 HOH A 26 340 340 HOH HOH . F 4 HOH A 27 341 341 HOH HOH . F 4 HOH A 28 342 342 HOH HOH . F 4 HOH A 29 344 344 HOH HOH . F 4 HOH A 30 347 347 HOH HOH . F 4 HOH A 31 350 350 HOH HOH . F 4 HOH A 32 351 351 HOH HOH . F 4 HOH A 33 353 353 HOH HOH . F 4 HOH A 34 354 354 HOH HOH . F 4 HOH A 35 357 357 HOH HOH . F 4 HOH A 36 361 361 HOH HOH . F 4 HOH A 37 363 363 HOH HOH . F 4 HOH A 38 364 364 HOH HOH . F 4 HOH A 39 366 366 HOH HOH . F 4 HOH A 40 367 367 HOH HOH . F 4 HOH A 41 369 369 HOH HOH . F 4 HOH A 42 370 370 HOH HOH . F 4 HOH A 43 375 375 HOH HOH . F 4 HOH A 44 376 376 HOH HOH . F 4 HOH A 45 378 378 HOH HOH . F 4 HOH A 46 379 379 HOH HOH . F 4 HOH A 47 381 381 HOH HOH . F 4 HOH A 48 382 382 HOH HOH . F 4 HOH A 49 383 383 HOH HOH . F 4 HOH A 50 386 386 HOH HOH . F 4 HOH A 51 387 387 HOH HOH . F 4 HOH A 52 388 388 HOH HOH . F 4 HOH A 53 389 389 HOH HOH . F 4 HOH A 54 390 390 HOH HOH . F 4 HOH A 55 393 393 HOH HOH . F 4 HOH A 56 396 396 HOH HOH . F 4 HOH A 57 397 397 HOH HOH . F 4 HOH A 58 400 400 HOH HOH . F 4 HOH A 59 402 402 HOH HOH . F 4 HOH A 60 405 405 HOH HOH . F 4 HOH A 61 408 408 HOH HOH . F 4 HOH A 62 412 412 HOH HOH . F 4 HOH A 63 413 413 HOH HOH . F 4 HOH A 64 414 414 HOH HOH . F 4 HOH A 65 417 417 HOH HOH . F 4 HOH A 66 423 423 HOH HOH . F 4 HOH A 67 427 427 HOH HOH . F 4 HOH A 68 428 428 HOH HOH . F 4 HOH A 69 429 429 HOH HOH . F 4 HOH A 70 430 430 HOH HOH . F 4 HOH A 71 431 431 HOH HOH . F 4 HOH A 72 436 436 HOH HOH . F 4 HOH A 73 438 438 HOH HOH . F 4 HOH A 74 439 439 HOH HOH . F 4 HOH A 75 441 441 HOH HOH . F 4 HOH A 76 442 442 HOH HOH . F 4 HOH A 77 443 443 HOH HOH . F 4 HOH A 78 444 444 HOH HOH . F 4 HOH A 79 447 447 HOH HOH . F 4 HOH A 80 448 448 HOH HOH . F 4 HOH A 81 452 452 HOH HOH . G 4 HOH B 1 203 203 HOH HOH . G 4 HOH B 2 300 300 HOH HOH . G 4 HOH B 3 307 307 HOH HOH . G 4 HOH B 4 312 312 HOH HOH . G 4 HOH B 5 314 314 HOH HOH . G 4 HOH B 6 316 316 HOH HOH . G 4 HOH B 7 318 318 HOH HOH . G 4 HOH B 8 319 319 HOH HOH . G 4 HOH B 9 321 321 HOH HOH . G 4 HOH B 10 322 322 HOH HOH . G 4 HOH B 11 325 325 HOH HOH . G 4 HOH B 12 326 326 HOH HOH . G 4 HOH B 13 327 327 HOH HOH . G 4 HOH B 14 328 328 HOH HOH . G 4 HOH B 15 332 332 HOH HOH . G 4 HOH B 16 334 334 HOH HOH . G 4 HOH B 17 337 337 HOH HOH . G 4 HOH B 18 343 343 HOH HOH . G 4 HOH B 19 345 345 HOH HOH . G 4 HOH B 20 346 346 HOH HOH . G 4 HOH B 21 348 348 HOH HOH . G 4 HOH B 22 349 349 HOH HOH . G 4 HOH B 23 352 352 HOH HOH . G 4 HOH B 24 355 355 HOH HOH . G 4 HOH B 25 356 356 HOH HOH . G 4 HOH B 26 358 358 HOH HOH . G 4 HOH B 27 359 359 HOH HOH . G 4 HOH B 28 360 360 HOH HOH . G 4 HOH B 29 362 362 HOH HOH . G 4 HOH B 30 365 365 HOH HOH . G 4 HOH B 31 368 368 HOH HOH . G 4 HOH B 32 371 371 HOH HOH . G 4 HOH B 33 372 372 HOH HOH . G 4 HOH B 34 373 373 HOH HOH . G 4 HOH B 35 374 374 HOH HOH . G 4 HOH B 36 377 377 HOH HOH . G 4 HOH B 37 380 380 HOH HOH . G 4 HOH B 38 384 384 HOH HOH . G 4 HOH B 39 385 385 HOH HOH . G 4 HOH B 40 391 391 HOH HOH . G 4 HOH B 41 392 392 HOH HOH . G 4 HOH B 42 394 394 HOH HOH . G 4 HOH B 43 395 395 HOH HOH . G 4 HOH B 44 398 398 HOH HOH . G 4 HOH B 45 399 399 HOH HOH . G 4 HOH B 46 401 401 HOH HOH . G 4 HOH B 47 403 403 HOH HOH . G 4 HOH B 48 404 404 HOH HOH . G 4 HOH B 49 406 406 HOH HOH . G 4 HOH B 50 407 407 HOH HOH . G 4 HOH B 51 409 409 HOH HOH . G 4 HOH B 52 410 410 HOH HOH . G 4 HOH B 53 411 411 HOH HOH . G 4 HOH B 54 415 415 HOH HOH . G 4 HOH B 55 416 416 HOH HOH . G 4 HOH B 56 418 418 HOH HOH . G 4 HOH B 57 419 419 HOH HOH . G 4 HOH B 58 420 420 HOH HOH . G 4 HOH B 59 421 421 HOH HOH . G 4 HOH B 60 422 422 HOH HOH . G 4 HOH B 61 424 424 HOH HOH . G 4 HOH B 62 425 425 HOH HOH . G 4 HOH B 63 426 426 HOH HOH . G 4 HOH B 64 432 432 HOH HOH . G 4 HOH B 65 433 433 HOH HOH . G 4 HOH B 66 434 434 HOH HOH . G 4 HOH B 67 435 435 HOH HOH . G 4 HOH B 68 437 437 HOH HOH . G 4 HOH B 69 440 440 HOH HOH . G 4 HOH B 70 445 445 HOH HOH . G 4 HOH B 71 446 446 HOH HOH . G 4 HOH B 72 449 449 HOH HOH . G 4 HOH B 73 450 450 HOH HOH . G 4 HOH B 74 451 451 HOH HOH . G 4 HOH B 75 453 453 HOH HOH . G 4 HOH B 76 454 454 HOH HOH . G 4 HOH B 77 455 455 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . B . E 2 -21.575 10.847 8.087 0.5 15.51 ? N1 017 200 B 1 HETATM 2 C C2 017 . B . E 2 -21.263 11.167 6.823 0.5 14.48 ? C2 017 200 B 1 HETATM 3 C C3 017 . B . E 2 -19.948 11.455 6.477 0.5 15.05 ? C3 017 200 B 1 HETATM 4 C C4 017 . B . E 2 -19.624 11.787 5.164 0.5 14.21 ? C4 017 200 B 1 HETATM 5 C C5 017 . B . E 2 -20.618 11.84 4.195 0.5 14.65 ? C5 017 200 B 1 HETATM 6 C C6 017 . B . E 2 -21.931 11.55 4.543 0.5 15 ? C6 017 200 B 1 HETATM 7 C C7 017 . B . E 2 -22.252 11.212 5.851 0.5 14.92 ? C7 017 200 B 1 HETATM 8 S S8 017 . B . E 2 -20.242 12.228 2.583 0.5 13.99 ? S8 017 200 B 1 HETATM 9 O O9 017 . B . E 2 -18.911 13.287 2.601 0.5 15.08 ? O9 017 200 B 1 HETATM 10 O O10 017 . B . E 2 -21.557 12.987 1.847 0.5 16.49 ? O10 017 200 B 1 HETATM 11 N N11 017 . B . E 2 -19.958 10.782 1.742 0.5 15.92 ? N11 017 200 B 1 HETATM 12 C C12 017 . B . E 2 -19.051 9.894 2.523 0.5 16.44 ? C12 017 200 B 1 HETATM 13 C C13 017 . B . E 2 -18.248 8.998 1.591 0.5 16.41 ? C13 017 200 B 1 HETATM 14 C C14 017 . B . E 2 -17.191 8.259 2.418 0.5 16.78 ? C14 017 200 B 1 HETATM 15 C C15 017 . B . E 2 -17.541 9.861 0.543 0.5 16.95 ? C15 017 200 B 1 HETATM 16 C C16 017 . B . E 2 -21.267 10.117 1.473 0.5 16.21 ? C16 017 200 B 1 HETATM 17 C C17 017 . B . E 2 -21.465 9.724 0.01 0.5 16.5 ? C17 017 200 B 1 HETATM 18 O O18 017 . B . E 2 -22.205 8.517 -0.125 0.5 16.96 ? O18 017 200 B 1 HETATM 19 C C19 017 . B . E 2 -22.077 10.821 -0.853 0.5 15.93 ? C19 017 200 B 1 HETATM 20 N N20 017 . B . E 2 -22.03 10.44 -2.251 0.5 15.6 ? N20 017 200 B 1 HETATM 21 C C21 017 . B . E 2 -21.046 10.939 -3.001 0.5 14.71 ? C21 017 200 B 1 HETATM 22 O O22 017 . B . E 2 -20.458 11.913 -2.551 0.5 15.88 ? O22 017 200 B 1 HETATM 23 O O23 017 . B . E 2 -20.796 10.336 -4.156 0.5 14.24 ? O23 017 200 B 1 HETATM 24 C C24 017 . B . E 2 -20.105 10.929 -5.279 0.5 14.44 ? C24 017 200 B 1 HETATM 25 C C25 017 . B . E 2 -19.814 9.883 -6.341 0.5 15.02 ? C25 017 200 B 1 HETATM 26 O O26 017 . B . E 2 -21.033 9.781 -7.073 0.5 14.13 ? O26 017 200 B 1 HETATM 27 C C27 017 . B . E 2 -21.646 11.076 -7.112 0.5 14.62 ? C27 017 200 B 1 HETATM 28 O O28 017 . B . E 2 -23.062 11.134 -6.887 0.5 14.9 ? O28 017 200 B 1 HETATM 29 C C29 017 . B . E 2 -23.295 11.551 -5.542 0.5 15.43 ? C29 017 200 B 1 HETATM 30 C C30 017 . B . E 2 -22.147 12.5 -5.226 0.5 14.38 ? C30 017 200 B 1 HETATM 31 C C31 017 . B . E 2 -20.976 11.93 -6.022 0.5 14.48 ? C31 017 200 B 1 HETATM 32 C C32 017 . B . E 2 -23.498 11.197 -0.45 0.5 13.93 ? C32 017 200 B 1 HETATM 33 C C33 017 . B . E 2 -25.111 12.195 -2.104 0.5 12.4 ? C33 017 200 B 1 HETATM 34 C C34 017 . B . E 2 -25.516 13.255 -2.912 0.5 11.96 ? C34 017 200 B 1 HETATM 35 C C35 017 . B . E 2 -24.781 14.435 -2.946 0.5 13.81 ? C35 017 200 B 1 HETATM 36 C C36 017 . B . E 2 -23.632 14.566 -2.177 0.5 14.11 ? C36 017 200 B 1 HETATM 37 C C37 017 . B . E 2 -23.222 13.51 -1.371 0.5 13.05 ? C37 017 200 B 1 HETATM 38 C C38 017 . B . E 2 -23.96 12.33 -1.337 0.5 12.82 ? C38 017 200 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 38 #