data_3OH1 # _model_server_result.job_id Dyug1BSMSqE5sNZrgR8dCg _model_server_result.datetime_utc '2024-11-07 23:53:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":644}' # _entry.id 3OH1 # _exptl.entry_id 3OH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.42 _cell.angle_gamma 90 _cell.entry_id 3OH1 _cell.length_a 108.226 _cell.length_b 122.32 _cell.length_c 61.221 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3OH1 _atom_sites.fract_transf_matrix[1][1] 0.00924 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002549 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008175 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016944 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UGB A 1 642 1 UGB UGB . C 3 GOL A 1 643 17 GOL GOL . D 3 GOL A 1 644 17 GOL GOL . E 4 HOH A 1 645 1 HOH HOH . E 4 HOH A 2 646 2 HOH HOH . E 4 HOH A 3 647 3 HOH HOH . E 4 HOH A 4 648 4 HOH HOH . E 4 HOH A 5 649 5 HOH HOH . E 4 HOH A 6 650 6 HOH HOH . E 4 HOH A 7 651 7 HOH HOH . E 4 HOH A 8 652 8 HOH HOH . E 4 HOH A 9 653 9 HOH HOH . E 4 HOH A 10 654 10 HOH HOH . E 4 HOH A 11 655 11 HOH HOH . E 4 HOH A 12 656 12 HOH HOH . E 4 HOH A 13 657 13 HOH HOH . E 4 HOH A 14 658 14 HOH HOH . E 4 HOH A 15 659 15 HOH HOH . E 4 HOH A 16 660 16 HOH HOH . E 4 HOH A 17 661 17 HOH HOH . E 4 HOH A 18 662 18 HOH HOH . E 4 HOH A 19 663 19 HOH HOH . E 4 HOH A 20 664 20 HOH HOH . E 4 HOH A 21 665 21 HOH HOH . E 4 HOH A 22 666 22 HOH HOH . E 4 HOH A 23 667 23 HOH HOH . E 4 HOH A 24 668 24 HOH HOH . E 4 HOH A 25 669 25 HOH HOH . E 4 HOH A 26 670 26 HOH HOH . E 4 HOH A 27 671 27 HOH HOH . E 4 HOH A 28 672 28 HOH HOH . E 4 HOH A 29 673 29 HOH HOH . E 4 HOH A 30 674 30 HOH HOH . E 4 HOH A 31 675 31 HOH HOH . E 4 HOH A 32 676 32 HOH HOH . E 4 HOH A 33 677 33 HOH HOH . E 4 HOH A 34 678 34 HOH HOH . E 4 HOH A 35 679 35 HOH HOH . E 4 HOH A 36 680 36 HOH HOH . E 4 HOH A 37 681 37 HOH HOH . E 4 HOH A 38 682 38 HOH HOH . E 4 HOH A 39 683 39 HOH HOH . E 4 HOH A 40 684 40 HOH HOH . E 4 HOH A 41 685 41 HOH HOH . E 4 HOH A 42 686 42 HOH HOH . E 4 HOH A 43 687 43 HOH HOH . E 4 HOH A 44 688 44 HOH HOH . E 4 HOH A 45 689 45 HOH HOH . E 4 HOH A 46 690 46 HOH HOH . E 4 HOH A 47 691 47 HOH HOH . E 4 HOH A 48 692 48 HOH HOH . E 4 HOH A 49 693 49 HOH HOH . E 4 HOH A 50 694 50 HOH HOH . E 4 HOH A 51 695 51 HOH HOH . E 4 HOH A 52 696 52 HOH HOH . E 4 HOH A 53 697 53 HOH HOH . E 4 HOH A 54 698 54 HOH HOH . E 4 HOH A 55 699 55 HOH HOH . E 4 HOH A 56 700 56 HOH HOH . E 4 HOH A 57 701 57 HOH HOH . E 4 HOH A 58 702 58 HOH HOH . E 4 HOH A 59 703 59 HOH HOH . E 4 HOH A 60 704 60 HOH HOH . E 4 HOH A 61 705 61 HOH HOH . E 4 HOH A 62 706 62 HOH HOH . E 4 HOH A 63 707 63 HOH HOH . E 4 HOH A 64 708 64 HOH HOH . E 4 HOH A 65 709 65 HOH HOH . E 4 HOH A 66 710 66 HOH HOH . E 4 HOH A 67 711 67 HOH HOH . E 4 HOH A 68 712 68 HOH HOH . E 4 HOH A 69 713 69 HOH HOH . E 4 HOH A 70 714 70 HOH HOH . E 4 HOH A 71 715 71 HOH HOH . E 4 HOH A 72 716 72 HOH HOH . E 4 HOH A 73 717 73 HOH HOH . E 4 HOH A 74 718 74 HOH HOH . E 4 HOH A 75 719 75 HOH HOH . E 4 HOH A 76 720 76 HOH HOH . E 4 HOH A 77 721 77 HOH HOH . E 4 HOH A 78 722 78 HOH HOH . E 4 HOH A 79 723 79 HOH HOH . E 4 HOH A 80 724 80 HOH HOH . E 4 HOH A 81 725 81 HOH HOH . E 4 HOH A 82 726 82 HOH HOH . E 4 HOH A 83 727 83 HOH HOH . E 4 HOH A 84 728 84 HOH HOH . E 4 HOH A 85 729 85 HOH HOH . E 4 HOH A 86 730 86 HOH HOH . E 4 HOH A 87 731 87 HOH HOH . E 4 HOH A 88 732 88 HOH HOH . E 4 HOH A 89 733 89 HOH HOH . E 4 HOH A 90 734 90 HOH HOH . E 4 HOH A 91 735 91 HOH HOH . E 4 HOH A 92 736 92 HOH HOH . E 4 HOH A 93 737 93 HOH HOH . E 4 HOH A 94 738 94 HOH HOH . E 4 HOH A 95 739 95 HOH HOH . E 4 HOH A 96 740 96 HOH HOH . E 4 HOH A 97 741 98 HOH HOH . E 4 HOH A 98 742 99 HOH HOH . E 4 HOH A 99 743 100 HOH HOH . E 4 HOH A 100 744 101 HOH HOH . E 4 HOH A 101 745 102 HOH HOH . E 4 HOH A 102 746 103 HOH HOH . E 4 HOH A 103 747 104 HOH HOH . E 4 HOH A 104 748 105 HOH HOH . E 4 HOH A 105 749 106 HOH HOH . E 4 HOH A 106 750 107 HOH HOH . E 4 HOH A 107 751 108 HOH HOH . E 4 HOH A 108 752 109 HOH HOH . E 4 HOH A 109 753 110 HOH HOH . E 4 HOH A 110 754 111 HOH HOH . E 4 HOH A 111 755 112 HOH HOH . E 4 HOH A 112 756 113 HOH HOH . E 4 HOH A 113 757 114 HOH HOH . E 4 HOH A 114 758 115 HOH HOH . E 4 HOH A 115 759 116 HOH HOH . E 4 HOH A 116 760 117 HOH HOH . E 4 HOH A 117 761 118 HOH HOH . E 4 HOH A 118 762 119 HOH HOH . E 4 HOH A 119 763 120 HOH HOH . E 4 HOH A 120 764 121 HOH HOH . E 4 HOH A 121 765 122 HOH HOH . E 4 HOH A 122 766 124 HOH HOH . E 4 HOH A 123 767 126 HOH HOH . E 4 HOH A 124 768 127 HOH HOH . E 4 HOH A 125 769 128 HOH HOH . E 4 HOH A 126 770 129 HOH HOH . E 4 HOH A 127 771 130 HOH HOH . E 4 HOH A 128 772 131 HOH HOH . E 4 HOH A 129 773 132 HOH HOH . E 4 HOH A 130 774 133 HOH HOH . E 4 HOH A 131 775 134 HOH HOH . E 4 HOH A 132 776 135 HOH HOH . E 4 HOH A 133 777 136 HOH HOH . E 4 HOH A 134 778 137 HOH HOH . E 4 HOH A 135 779 138 HOH HOH . E 4 HOH A 136 780 139 HOH HOH . E 4 HOH A 137 781 140 HOH HOH . E 4 HOH A 138 782 141 HOH HOH . E 4 HOH A 139 783 142 HOH HOH . E 4 HOH A 140 784 143 HOH HOH . E 4 HOH A 141 785 144 HOH HOH . E 4 HOH A 142 786 145 HOH HOH . E 4 HOH A 143 787 146 HOH HOH . E 4 HOH A 144 788 147 HOH HOH . E 4 HOH A 145 789 148 HOH HOH . E 4 HOH A 146 790 149 HOH HOH . E 4 HOH A 147 791 151 HOH HOH . E 4 HOH A 148 792 152 HOH HOH . E 4 HOH A 149 793 154 HOH HOH . E 4 HOH A 150 794 155 HOH HOH . E 4 HOH A 151 795 156 HOH HOH . E 4 HOH A 152 796 157 HOH HOH . E 4 HOH A 153 797 158 HOH HOH . E 4 HOH A 154 798 159 HOH HOH . E 4 HOH A 155 799 160 HOH HOH . E 4 HOH A 156 800 161 HOH HOH . E 4 HOH A 157 801 162 HOH HOH . E 4 HOH A 158 802 163 HOH HOH . E 4 HOH A 159 803 164 HOH HOH . E 4 HOH A 160 804 165 HOH HOH . E 4 HOH A 161 805 166 HOH HOH . E 4 HOH A 162 806 167 HOH HOH . E 4 HOH A 163 807 168 HOH HOH . E 4 HOH A 164 808 169 HOH HOH . E 4 HOH A 165 809 170 HOH HOH . E 4 HOH A 166 810 171 HOH HOH . E 4 HOH A 167 811 172 HOH HOH . E 4 HOH A 168 812 173 HOH HOH . E 4 HOH A 169 813 175 HOH HOH . E 4 HOH A 170 814 176 HOH HOH . E 4 HOH A 171 815 177 HOH HOH . E 4 HOH A 172 816 178 HOH HOH . E 4 HOH A 173 817 180 HOH HOH . E 4 HOH A 174 818 181 HOH HOH . E 4 HOH A 175 819 182 HOH HOH . E 4 HOH A 176 820 183 HOH HOH . E 4 HOH A 177 821 184 HOH HOH . E 4 HOH A 178 822 185 HOH HOH . E 4 HOH A 179 823 186 HOH HOH . E 4 HOH A 180 824 187 HOH HOH . E 4 HOH A 181 825 188 HOH HOH . E 4 HOH A 182 826 189 HOH HOH . E 4 HOH A 183 827 190 HOH HOH . E 4 HOH A 184 828 191 HOH HOH . E 4 HOH A 185 829 192 HOH HOH . E 4 HOH A 186 830 194 HOH HOH . E 4 HOH A 187 831 195 HOH HOH . E 4 HOH A 188 832 196 HOH HOH . E 4 HOH A 189 833 197 HOH HOH . E 4 HOH A 190 834 198 HOH HOH . E 4 HOH A 191 835 199 HOH HOH . E 4 HOH A 192 836 200 HOH HOH . E 4 HOH A 193 837 201 HOH HOH . E 4 HOH A 194 838 202 HOH HOH . E 4 HOH A 195 839 203 HOH HOH . E 4 HOH A 196 840 204 HOH HOH . E 4 HOH A 197 841 205 HOH HOH . E 4 HOH A 198 842 206 HOH HOH . E 4 HOH A 199 843 209 HOH HOH . E 4 HOH A 200 844 210 HOH HOH . E 4 HOH A 201 845 211 HOH HOH . E 4 HOH A 202 846 212 HOH HOH . E 4 HOH A 203 847 213 HOH HOH . E 4 HOH A 204 848 215 HOH HOH . E 4 HOH A 205 849 216 HOH HOH . E 4 HOH A 206 850 217 HOH HOH . E 4 HOH A 207 851 218 HOH HOH . E 4 HOH A 208 852 219 HOH HOH . E 4 HOH A 209 853 220 HOH HOH . E 4 HOH A 210 854 221 HOH HOH . E 4 HOH A 211 855 222 HOH HOH . E 4 HOH A 212 856 223 HOH HOH . E 4 HOH A 213 857 224 HOH HOH . E 4 HOH A 214 858 225 HOH HOH . E 4 HOH A 215 859 226 HOH HOH . E 4 HOH A 216 860 227 HOH HOH . E 4 HOH A 217 861 228 HOH HOH . E 4 HOH A 218 862 229 HOH HOH . E 4 HOH A 219 863 230 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 3 12.875 -10.06 -6.04 1 71.26 ? C1 GOL 644 A 1 HETATM 2 O O1 GOL . . . D 3 13.151 -8.876 -6.767 1 70.82 ? O1 GOL 644 A 1 HETATM 3 C C2 GOL . . . D 3 12.129 -9.747 -4.737 1 69.67 ? C2 GOL 644 A 1 HETATM 4 O O2 GOL . . . D 3 12.066 -8.355 -4.574 1 70.8 ? O2 GOL 644 A 1 HETATM 5 C C3 GOL . . . D 3 12.778 -10.354 -3.49 1 67.2 ? C3 GOL 644 A 1 HETATM 6 O O3 GOL . . . D 3 11.944 -10.115 -2.362 1 65.78 ? O3 GOL 644 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #