data_3OH2 # _model_server_result.job_id 2h0n5mg-qKLkGaJAlng0fQ _model_server_result.datetime_utc '2024-12-02 23:01:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oh2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":643}' # _entry.id 3OH2 # _exptl.entry_id 3OH2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.98 _cell.angle_gamma 90 _cell.entry_id 3OH2 _cell.length_a 107.433 _cell.length_b 121.91 _cell.length_c 61.407 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OH2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 191 n n C1 C2 GOL sing 192 n n C1 H11 GOL sing 193 n n C1 H12 GOL sing 194 n n O1 HO1 GOL sing 195 n n C2 O2 GOL sing 196 n n C2 C3 GOL sing 197 n n C2 H2 GOL sing 198 n n O2 HO2 GOL sing 199 n n C3 O3 GOL sing 200 n n C3 H31 GOL sing 201 n n C3 H32 GOL sing 202 n n O3 HO3 GOL sing 203 n n # _atom_sites.entry_id 3OH2 _atom_sites.fract_transf_matrix[1][1] 0.009308 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002666 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008203 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016939 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GDU A 1 642 1 GDU GDU . C 3 GOL A 1 643 17 GOL GOL . D 4 HOH A 1 644 1 HOH HOH . D 4 HOH A 2 645 2 HOH HOH . D 4 HOH A 3 646 3 HOH HOH . D 4 HOH A 4 647 4 HOH HOH . D 4 HOH A 5 648 5 HOH HOH . D 4 HOH A 6 649 6 HOH HOH . D 4 HOH A 7 650 7 HOH HOH . D 4 HOH A 8 651 8 HOH HOH . D 4 HOH A 9 652 9 HOH HOH . D 4 HOH A 10 653 10 HOH HOH . D 4 HOH A 11 654 11 HOH HOH . D 4 HOH A 12 655 12 HOH HOH . D 4 HOH A 13 656 13 HOH HOH . D 4 HOH A 14 657 14 HOH HOH . D 4 HOH A 15 658 15 HOH HOH . D 4 HOH A 16 659 16 HOH HOH . D 4 HOH A 17 660 17 HOH HOH . D 4 HOH A 18 661 18 HOH HOH . D 4 HOH A 19 662 19 HOH HOH . D 4 HOH A 20 663 20 HOH HOH . D 4 HOH A 21 664 21 HOH HOH . D 4 HOH A 22 665 22 HOH HOH . D 4 HOH A 23 666 23 HOH HOH . D 4 HOH A 24 667 24 HOH HOH . D 4 HOH A 25 668 25 HOH HOH . D 4 HOH A 26 669 26 HOH HOH . D 4 HOH A 27 670 27 HOH HOH . D 4 HOH A 28 671 28 HOH HOH . D 4 HOH A 29 672 29 HOH HOH . D 4 HOH A 30 673 30 HOH HOH . D 4 HOH A 31 674 31 HOH HOH . D 4 HOH A 32 675 32 HOH HOH . D 4 HOH A 33 676 33 HOH HOH . D 4 HOH A 34 677 34 HOH HOH . D 4 HOH A 35 678 35 HOH HOH . D 4 HOH A 36 679 36 HOH HOH . D 4 HOH A 37 680 37 HOH HOH . D 4 HOH A 38 681 38 HOH HOH . D 4 HOH A 39 682 39 HOH HOH . D 4 HOH A 40 683 40 HOH HOH . D 4 HOH A 41 684 41 HOH HOH . D 4 HOH A 42 685 42 HOH HOH . D 4 HOH A 43 686 43 HOH HOH . D 4 HOH A 44 687 44 HOH HOH . D 4 HOH A 45 688 45 HOH HOH . D 4 HOH A 46 689 46 HOH HOH . D 4 HOH A 47 690 47 HOH HOH . D 4 HOH A 48 691 48 HOH HOH . D 4 HOH A 49 692 49 HOH HOH . D 4 HOH A 50 693 50 HOH HOH . D 4 HOH A 51 694 51 HOH HOH . D 4 HOH A 52 695 52 HOH HOH . D 4 HOH A 53 696 53 HOH HOH . D 4 HOH A 54 697 54 HOH HOH . D 4 HOH A 55 698 55 HOH HOH . D 4 HOH A 56 699 56 HOH HOH . D 4 HOH A 57 700 57 HOH HOH . D 4 HOH A 58 701 58 HOH HOH . D 4 HOH A 59 702 59 HOH HOH . D 4 HOH A 60 703 60 HOH HOH . D 4 HOH A 61 704 61 HOH HOH . D 4 HOH A 62 705 62 HOH HOH . D 4 HOH A 63 706 63 HOH HOH . D 4 HOH A 64 707 64 HOH HOH . D 4 HOH A 65 708 65 HOH HOH . D 4 HOH A 66 709 66 HOH HOH . D 4 HOH A 67 710 67 HOH HOH . D 4 HOH A 68 711 68 HOH HOH . D 4 HOH A 69 712 69 HOH HOH . D 4 HOH A 70 713 70 HOH HOH . D 4 HOH A 71 714 71 HOH HOH . D 4 HOH A 72 715 72 HOH HOH . D 4 HOH A 73 716 73 HOH HOH . D 4 HOH A 74 717 74 HOH HOH . D 4 HOH A 75 718 75 HOH HOH . D 4 HOH A 76 719 76 HOH HOH . D 4 HOH A 77 720 77 HOH HOH . D 4 HOH A 78 721 78 HOH HOH . D 4 HOH A 79 722 79 HOH HOH . D 4 HOH A 80 723 80 HOH HOH . D 4 HOH A 81 724 81 HOH HOH . D 4 HOH A 82 725 82 HOH HOH . D 4 HOH A 83 726 83 HOH HOH . D 4 HOH A 84 727 84 HOH HOH . D 4 HOH A 85 728 85 HOH HOH . D 4 HOH A 86 729 86 HOH HOH . D 4 HOH A 87 730 87 HOH HOH . D 4 HOH A 88 731 88 HOH HOH . D 4 HOH A 89 732 89 HOH HOH . D 4 HOH A 90 733 90 HOH HOH . D 4 HOH A 91 734 91 HOH HOH . D 4 HOH A 92 735 92 HOH HOH . D 4 HOH A 93 736 93 HOH HOH . D 4 HOH A 94 737 94 HOH HOH . D 4 HOH A 95 738 95 HOH HOH . D 4 HOH A 96 739 96 HOH HOH . D 4 HOH A 97 740 97 HOH HOH . D 4 HOH A 98 741 98 HOH HOH . D 4 HOH A 99 742 99 HOH HOH . D 4 HOH A 100 743 100 HOH HOH . D 4 HOH A 101 744 101 HOH HOH . D 4 HOH A 102 745 102 HOH HOH . D 4 HOH A 103 746 103 HOH HOH . D 4 HOH A 104 747 104 HOH HOH . D 4 HOH A 105 748 105 HOH HOH . D 4 HOH A 106 749 106 HOH HOH . D 4 HOH A 107 750 107 HOH HOH . D 4 HOH A 108 751 108 HOH HOH . D 4 HOH A 109 752 109 HOH HOH . D 4 HOH A 110 753 110 HOH HOH . D 4 HOH A 111 754 111 HOH HOH . D 4 HOH A 112 755 112 HOH HOH . D 4 HOH A 113 756 113 HOH HOH . D 4 HOH A 114 757 114 HOH HOH . D 4 HOH A 115 758 115 HOH HOH . D 4 HOH A 116 759 116 HOH HOH . D 4 HOH A 117 760 117 HOH HOH . D 4 HOH A 118 761 118 HOH HOH . D 4 HOH A 119 762 119 HOH HOH . D 4 HOH A 120 763 120 HOH HOH . D 4 HOH A 121 764 121 HOH HOH . D 4 HOH A 122 765 122 HOH HOH . D 4 HOH A 123 766 123 HOH HOH . D 4 HOH A 124 767 124 HOH HOH . D 4 HOH A 125 768 125 HOH HOH . D 4 HOH A 126 769 126 HOH HOH . D 4 HOH A 127 770 127 HOH HOH . D 4 HOH A 128 771 128 HOH HOH . D 4 HOH A 129 772 129 HOH HOH . D 4 HOH A 130 773 130 HOH HOH . D 4 HOH A 131 774 131 HOH HOH . D 4 HOH A 132 775 132 HOH HOH . D 4 HOH A 133 776 133 HOH HOH . D 4 HOH A 134 777 134 HOH HOH . D 4 HOH A 135 778 135 HOH HOH . D 4 HOH A 136 779 136 HOH HOH . D 4 HOH A 137 780 137 HOH HOH . D 4 HOH A 138 781 138 HOH HOH . D 4 HOH A 139 782 139 HOH HOH . D 4 HOH A 140 783 140 HOH HOH . D 4 HOH A 141 784 142 HOH HOH . D 4 HOH A 142 785 143 HOH HOH . D 4 HOH A 143 786 144 HOH HOH . D 4 HOH A 144 787 145 HOH HOH . D 4 HOH A 145 788 146 HOH HOH . D 4 HOH A 146 789 147 HOH HOH . D 4 HOH A 147 790 148 HOH HOH . D 4 HOH A 148 791 149 HOH HOH . D 4 HOH A 149 792 150 HOH HOH . D 4 HOH A 150 793 151 HOH HOH . D 4 HOH A 151 794 152 HOH HOH . D 4 HOH A 152 795 153 HOH HOH . D 4 HOH A 153 796 154 HOH HOH . D 4 HOH A 154 797 155 HOH HOH . D 4 HOH A 155 798 156 HOH HOH . D 4 HOH A 156 799 157 HOH HOH . D 4 HOH A 157 800 158 HOH HOH . D 4 HOH A 158 801 159 HOH HOH . D 4 HOH A 159 802 160 HOH HOH . D 4 HOH A 160 803 161 HOH HOH . D 4 HOH A 161 804 162 HOH HOH . D 4 HOH A 162 805 164 HOH HOH . D 4 HOH A 163 806 165 HOH HOH . D 4 HOH A 164 807 166 HOH HOH . D 4 HOH A 165 808 167 HOH HOH . D 4 HOH A 166 809 168 HOH HOH . D 4 HOH A 167 810 169 HOH HOH . D 4 HOH A 168 811 170 HOH HOH . D 4 HOH A 169 812 171 HOH HOH . D 4 HOH A 170 813 172 HOH HOH . D 4 HOH A 171 814 173 HOH HOH . D 4 HOH A 172 815 174 HOH HOH . D 4 HOH A 173 816 175 HOH HOH . D 4 HOH A 174 817 176 HOH HOH . D 4 HOH A 175 818 177 HOH HOH . D 4 HOH A 176 819 179 HOH HOH . D 4 HOH A 177 820 181 HOH HOH . D 4 HOH A 178 821 182 HOH HOH . D 4 HOH A 179 822 183 HOH HOH . D 4 HOH A 180 823 184 HOH HOH . D 4 HOH A 181 824 185 HOH HOH . D 4 HOH A 182 825 186 HOH HOH . D 4 HOH A 183 826 187 HOH HOH . D 4 HOH A 184 827 188 HOH HOH . D 4 HOH A 185 828 189 HOH HOH . D 4 HOH A 186 829 190 HOH HOH . D 4 HOH A 187 830 191 HOH HOH . D 4 HOH A 188 831 192 HOH HOH . D 4 HOH A 189 832 193 HOH HOH . D 4 HOH A 190 833 194 HOH HOH . D 4 HOH A 191 834 195 HOH HOH . D 4 HOH A 192 835 196 HOH HOH . D 4 HOH A 193 836 197 HOH HOH . D 4 HOH A 194 837 198 HOH HOH . D 4 HOH A 195 838 199 HOH HOH . D 4 HOH A 196 839 200 HOH HOH . D 4 HOH A 197 840 202 HOH HOH . D 4 HOH A 198 841 203 HOH HOH . D 4 HOH A 199 842 204 HOH HOH . D 4 HOH A 200 843 205 HOH HOH . D 4 HOH A 201 844 206 HOH HOH . D 4 HOH A 202 845 207 HOH HOH . D 4 HOH A 203 846 208 HOH HOH . D 4 HOH A 204 847 209 HOH HOH . D 4 HOH A 205 848 210 HOH HOH . D 4 HOH A 206 849 211 HOH HOH . D 4 HOH A 207 850 212 HOH HOH . D 4 HOH A 208 851 213 HOH HOH . D 4 HOH A 209 852 214 HOH HOH . D 4 HOH A 210 853 215 HOH HOH . D 4 HOH A 211 854 216 HOH HOH . D 4 HOH A 212 855 217 HOH HOH . D 4 HOH A 213 856 219 HOH HOH . D 4 HOH A 214 857 220 HOH HOH . D 4 HOH A 215 858 221 HOH HOH . D 4 HOH A 216 859 222 HOH HOH . D 4 HOH A 217 860 223 HOH HOH . D 4 HOH A 218 861 224 HOH HOH . D 4 HOH A 219 862 225 HOH HOH . D 4 HOH A 220 863 226 HOH HOH . D 4 HOH A 221 864 227 HOH HOH . D 4 HOH A 222 865 228 HOH HOH . D 4 HOH A 223 866 229 HOH HOH . D 4 HOH A 224 867 230 HOH HOH . D 4 HOH A 225 868 231 HOH HOH . D 4 HOH A 226 869 233 HOH HOH . D 4 HOH A 227 870 234 HOH HOH . D 4 HOH A 228 871 235 HOH HOH . D 4 HOH A 229 872 236 HOH HOH . D 4 HOH A 230 873 237 HOH HOH . D 4 HOH A 231 874 238 HOH HOH . D 4 HOH A 232 875 239 HOH HOH . D 4 HOH A 233 876 240 HOH HOH . D 4 HOH A 234 877 241 HOH HOH . D 4 HOH A 235 878 242 HOH HOH . D 4 HOH A 236 879 243 HOH HOH . D 4 HOH A 237 880 244 HOH HOH . D 4 HOH A 238 881 245 HOH HOH . D 4 HOH A 239 882 246 HOH HOH . D 4 HOH A 240 883 247 HOH HOH . D 4 HOH A 241 884 248 HOH HOH . D 4 HOH A 242 885 249 HOH HOH . D 4 HOH A 243 886 250 HOH HOH . D 4 HOH A 244 887 251 HOH HOH . D 4 HOH A 245 888 252 HOH HOH . D 4 HOH A 246 889 253 HOH HOH . D 4 HOH A 247 890 254 HOH HOH . D 4 HOH A 248 891 255 HOH HOH . D 4 HOH A 249 892 256 HOH HOH . D 4 HOH A 250 893 257 HOH HOH . D 4 HOH A 251 894 258 HOH HOH . D 4 HOH A 252 895 259 HOH HOH . D 4 HOH A 253 896 260 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 -12.874 -9.975 5.361 1 79.9 ? C1 GOL 643 A 1 HETATM 2 O O1 GOL . . . C 3 -12.596 -9.007 6.347 1 73.68 ? O1 GOL 643 A 1 HETATM 3 C C2 GOL . . . C 3 -12.847 -9.265 4.018 1 79.87 ? C2 GOL 643 A 1 HETATM 4 O O2 GOL . . . C 3 -12.27 -8.002 4.29 1 80.96 ? O2 GOL 643 A 1 HETATM 5 C C3 GOL . . . C 3 -11.989 -10.037 3.016 1 76.43 ? C3 GOL 643 A 1 HETATM 6 O O3 GOL . . . C 3 -12.339 -9.682 1.691 1 77.59 ? O3 GOL 643 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 265 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #