data_3OH4 # _model_server_result.job_id Dn9DmGlnqubMfhJXRsDF1A _model_server_result.datetime_utc '2024-11-08 01:44:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oh4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":642}' # _entry.id 3OH4 # _exptl.entry_id 3OH4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 105.73 _cell.angle_gamma 90 _cell.entry_id 3OH4 _cell.length_a 107.814 _cell.length_b 121.665 _cell.length_c 61.393 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OH4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3OH4 _atom_sites.fract_transf_matrix[1][1] 0.009275 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002612 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008219 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016922 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 UPG A 1 7566 7566 UPG UPG . C 3 GOL A 1 642 17 GOL GOL . D 4 HOH A 1 643 1 HOH HOH . D 4 HOH A 2 644 2 HOH HOH . D 4 HOH A 3 645 3 HOH HOH . D 4 HOH A 4 646 4 HOH HOH . D 4 HOH A 5 647 5 HOH HOH . D 4 HOH A 6 648 6 HOH HOH . D 4 HOH A 7 649 7 HOH HOH . D 4 HOH A 8 650 8 HOH HOH . D 4 HOH A 9 651 9 HOH HOH . D 4 HOH A 10 652 10 HOH HOH . D 4 HOH A 11 653 11 HOH HOH . D 4 HOH A 12 654 12 HOH HOH . D 4 HOH A 13 655 13 HOH HOH . D 4 HOH A 14 656 14 HOH HOH . D 4 HOH A 15 657 15 HOH HOH . D 4 HOH A 16 658 16 HOH HOH . D 4 HOH A 17 659 17 HOH HOH . D 4 HOH A 18 660 18 HOH HOH . D 4 HOH A 19 661 19 HOH HOH . D 4 HOH A 20 662 20 HOH HOH . D 4 HOH A 21 663 21 HOH HOH . D 4 HOH A 22 664 22 HOH HOH . D 4 HOH A 23 665 23 HOH HOH . D 4 HOH A 24 666 24 HOH HOH . D 4 HOH A 25 667 25 HOH HOH . D 4 HOH A 26 668 26 HOH HOH . D 4 HOH A 27 669 27 HOH HOH . D 4 HOH A 28 670 28 HOH HOH . D 4 HOH A 29 671 29 HOH HOH . D 4 HOH A 30 672 30 HOH HOH . D 4 HOH A 31 673 31 HOH HOH . D 4 HOH A 32 674 32 HOH HOH . D 4 HOH A 33 675 33 HOH HOH . D 4 HOH A 34 676 34 HOH HOH . D 4 HOH A 35 677 35 HOH HOH . D 4 HOH A 36 678 36 HOH HOH . D 4 HOH A 37 679 37 HOH HOH . D 4 HOH A 38 680 38 HOH HOH . D 4 HOH A 39 681 39 HOH HOH . D 4 HOH A 40 682 40 HOH HOH . D 4 HOH A 41 683 41 HOH HOH . D 4 HOH A 42 684 42 HOH HOH . D 4 HOH A 43 685 43 HOH HOH . D 4 HOH A 44 686 44 HOH HOH . D 4 HOH A 45 687 45 HOH HOH . D 4 HOH A 46 688 46 HOH HOH . D 4 HOH A 47 689 47 HOH HOH . D 4 HOH A 48 690 48 HOH HOH . D 4 HOH A 49 691 49 HOH HOH . D 4 HOH A 50 692 50 HOH HOH . D 4 HOH A 51 693 51 HOH HOH . D 4 HOH A 52 694 52 HOH HOH . D 4 HOH A 53 695 53 HOH HOH . D 4 HOH A 54 696 54 HOH HOH . D 4 HOH A 55 697 55 HOH HOH . D 4 HOH A 56 698 56 HOH HOH . D 4 HOH A 57 699 57 HOH HOH . D 4 HOH A 58 700 58 HOH HOH . D 4 HOH A 59 701 59 HOH HOH . D 4 HOH A 60 702 60 HOH HOH . D 4 HOH A 61 703 61 HOH HOH . D 4 HOH A 62 704 62 HOH HOH . D 4 HOH A 63 705 63 HOH HOH . D 4 HOH A 64 706 64 HOH HOH . D 4 HOH A 65 707 65 HOH HOH . D 4 HOH A 66 708 66 HOH HOH . D 4 HOH A 67 709 67 HOH HOH . D 4 HOH A 68 710 68 HOH HOH . D 4 HOH A 69 711 69 HOH HOH . D 4 HOH A 70 712 70 HOH HOH . D 4 HOH A 71 713 71 HOH HOH . D 4 HOH A 72 714 72 HOH HOH . D 4 HOH A 73 715 73 HOH HOH . D 4 HOH A 74 716 74 HOH HOH . D 4 HOH A 75 717 75 HOH HOH . D 4 HOH A 76 718 76 HOH HOH . D 4 HOH A 77 719 77 HOH HOH . D 4 HOH A 78 720 78 HOH HOH . D 4 HOH A 79 721 80 HOH HOH . D 4 HOH A 80 722 81 HOH HOH . D 4 HOH A 81 723 82 HOH HOH . D 4 HOH A 82 724 83 HOH HOH . D 4 HOH A 83 725 84 HOH HOH . D 4 HOH A 84 726 85 HOH HOH . D 4 HOH A 85 727 86 HOH HOH . D 4 HOH A 86 728 87 HOH HOH . D 4 HOH A 87 729 88 HOH HOH . D 4 HOH A 88 730 89 HOH HOH . D 4 HOH A 89 731 90 HOH HOH . D 4 HOH A 90 732 91 HOH HOH . D 4 HOH A 91 733 92 HOH HOH . D 4 HOH A 92 734 93 HOH HOH . D 4 HOH A 93 735 94 HOH HOH . D 4 HOH A 94 736 95 HOH HOH . D 4 HOH A 95 737 96 HOH HOH . D 4 HOH A 96 738 97 HOH HOH . D 4 HOH A 97 739 98 HOH HOH . D 4 HOH A 98 740 99 HOH HOH . D 4 HOH A 99 741 100 HOH HOH . D 4 HOH A 100 742 101 HOH HOH . D 4 HOH A 101 743 102 HOH HOH . D 4 HOH A 102 744 103 HOH HOH . D 4 HOH A 103 745 104 HOH HOH . D 4 HOH A 104 746 105 HOH HOH . D 4 HOH A 105 747 106 HOH HOH . D 4 HOH A 106 748 107 HOH HOH . D 4 HOH A 107 749 108 HOH HOH . D 4 HOH A 108 750 109 HOH HOH . D 4 HOH A 109 751 110 HOH HOH . D 4 HOH A 110 752 111 HOH HOH . D 4 HOH A 111 753 112 HOH HOH . D 4 HOH A 112 754 113 HOH HOH . D 4 HOH A 113 755 114 HOH HOH . D 4 HOH A 114 756 115 HOH HOH . D 4 HOH A 115 757 116 HOH HOH . D 4 HOH A 116 758 117 HOH HOH . D 4 HOH A 117 759 118 HOH HOH . D 4 HOH A 118 760 119 HOH HOH . D 4 HOH A 119 761 120 HOH HOH . D 4 HOH A 120 762 121 HOH HOH . D 4 HOH A 121 763 122 HOH HOH . D 4 HOH A 122 764 123 HOH HOH . D 4 HOH A 123 765 124 HOH HOH . D 4 HOH A 124 766 125 HOH HOH . D 4 HOH A 125 767 130 HOH HOH . D 4 HOH A 126 768 131 HOH HOH . D 4 HOH A 127 769 132 HOH HOH . D 4 HOH A 128 770 133 HOH HOH . D 4 HOH A 129 771 134 HOH HOH . D 4 HOH A 130 772 135 HOH HOH . D 4 HOH A 131 773 136 HOH HOH . D 4 HOH A 132 774 138 HOH HOH . D 4 HOH A 133 775 139 HOH HOH . D 4 HOH A 134 776 140 HOH HOH . D 4 HOH A 135 777 141 HOH HOH . D 4 HOH A 136 778 142 HOH HOH . D 4 HOH A 137 779 143 HOH HOH . D 4 HOH A 138 780 144 HOH HOH . D 4 HOH A 139 781 145 HOH HOH . D 4 HOH A 140 782 146 HOH HOH . D 4 HOH A 141 783 148 HOH HOH . D 4 HOH A 142 784 149 HOH HOH . D 4 HOH A 143 785 151 HOH HOH . D 4 HOH A 144 786 152 HOH HOH . D 4 HOH A 145 787 153 HOH HOH . D 4 HOH A 146 788 154 HOH HOH . D 4 HOH A 147 789 155 HOH HOH . D 4 HOH A 148 790 156 HOH HOH . D 4 HOH A 149 791 157 HOH HOH . D 4 HOH A 150 792 158 HOH HOH . D 4 HOH A 151 793 159 HOH HOH . D 4 HOH A 152 794 160 HOH HOH . D 4 HOH A 153 795 161 HOH HOH . D 4 HOH A 154 796 162 HOH HOH . D 4 HOH A 155 797 163 HOH HOH . D 4 HOH A 156 798 164 HOH HOH . D 4 HOH A 157 799 165 HOH HOH . D 4 HOH A 158 800 166 HOH HOH . D 4 HOH A 159 801 167 HOH HOH . D 4 HOH A 160 802 168 HOH HOH . D 4 HOH A 161 803 170 HOH HOH . D 4 HOH A 162 804 171 HOH HOH . D 4 HOH A 163 805 172 HOH HOH . D 4 HOH A 164 806 173 HOH HOH . D 4 HOH A 165 807 176 HOH HOH . D 4 HOH A 166 808 177 HOH HOH . D 4 HOH A 167 809 179 HOH HOH . D 4 HOH A 168 810 180 HOH HOH . D 4 HOH A 169 811 181 HOH HOH . D 4 HOH A 170 812 182 HOH HOH . D 4 HOH A 171 813 184 HOH HOH . D 4 HOH A 172 814 185 HOH HOH . D 4 HOH A 173 815 187 HOH HOH . D 4 HOH A 174 816 188 HOH HOH . D 4 HOH A 175 817 189 HOH HOH . D 4 HOH A 176 818 190 HOH HOH . D 4 HOH A 177 819 191 HOH HOH . D 4 HOH A 178 820 192 HOH HOH . D 4 HOH A 179 821 193 HOH HOH . D 4 HOH A 180 822 194 HOH HOH . D 4 HOH A 181 823 195 HOH HOH . D 4 HOH A 182 824 197 HOH HOH . D 4 HOH A 183 825 198 HOH HOH . D 4 HOH A 184 826 199 HOH HOH . D 4 HOH A 185 827 200 HOH HOH . D 4 HOH A 186 828 201 HOH HOH . D 4 HOH A 187 829 202 HOH HOH . D 4 HOH A 188 830 203 HOH HOH . D 4 HOH A 189 831 204 HOH HOH . D 4 HOH A 190 832 205 HOH HOH . D 4 HOH A 191 833 206 HOH HOH . D 4 HOH A 192 834 207 HOH HOH . D 4 HOH A 193 835 208 HOH HOH . D 4 HOH A 194 836 209 HOH HOH . D 4 HOH A 195 837 210 HOH HOH . D 4 HOH A 196 838 211 HOH HOH . D 4 HOH A 197 839 212 HOH HOH . D 4 HOH A 198 840 213 HOH HOH . D 4 HOH A 199 841 214 HOH HOH . D 4 HOH A 200 842 215 HOH HOH . D 4 HOH A 201 843 216 HOH HOH . D 4 HOH A 202 844 217 HOH HOH . D 4 HOH A 203 845 218 HOH HOH . D 4 HOH A 204 846 219 HOH HOH . D 4 HOH A 205 847 220 HOH HOH . D 4 HOH A 206 848 221 HOH HOH . D 4 HOH A 207 849 222 HOH HOH . D 4 HOH A 208 850 223 HOH HOH . D 4 HOH A 209 851 224 HOH HOH . D 4 HOH A 210 852 225 HOH HOH . D 4 HOH A 211 853 226 HOH HOH . D 4 HOH A 212 854 227 HOH HOH . D 4 HOH A 213 855 228 HOH HOH . D 4 HOH A 214 856 229 HOH HOH . D 4 HOH A 215 857 230 HOH HOH . D 4 HOH A 216 858 231 HOH HOH . D 4 HOH A 217 859 232 HOH HOH . D 4 HOH A 218 860 233 HOH HOH . D 4 HOH A 219 861 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 12.043 -8.82 -5.034 1 65.37 ? C1 GOL 642 A 1 HETATM 2 O O1 GOL . . . C 3 12.763 -9.078 -6.225 1 65.02 ? O1 GOL 642 A 1 HETATM 3 C C2 GOL . . . C 3 12.118 -10.039 -4.11 1 64.09 ? C2 GOL 642 A 1 HETATM 4 O O2 GOL . . . C 3 13.465 -10.308 -3.785 1 61.23 ? O2 GOL 642 A 1 HETATM 5 C C3 GOL . . . C 3 11.327 -9.799 -2.823 1 62.97 ? C3 GOL 642 A 1 HETATM 6 O O3 GOL . . . C 3 12.194 -9.88 -1.709 1 61.26 ? O3 GOL 642 A 1 # _model_server_stats.io_time_ms 77 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #