data_3OIF
#
_model_server_result.job_id            pC3kAdVbHyCkt6JkLFRs0A 
_model_server_result.datetime_utc      '2024-11-26 11:57:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oif 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    3OIF 
#
_exptl.entry_id    3OIF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              663.425 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OIF 
_cell.length_a            64.098 
_cell.length_b            83.655 
_cell.length_c            203.547 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OIF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
#
_chem_comp.formula           'C21 H27 N7 O14 P2' 
_chem_comp.formula_weight    663.425 
_chem_comp.id                NAD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              NICOTINAMIDE-ADENINE-DINUCLEOTIDE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAD doub 237 n n 
PA O2A NAD sing 238 n n 
PA O5B NAD sing 239 n n 
PA O3 NAD sing 240 n n 
O2A HOA2 NAD sing 241 n n 
O5B C5B NAD sing 242 n n 
C5B C4B NAD sing 243 n n 
C5B H51A NAD sing 244 n n 
C5B H52A NAD sing 245 n n 
C4B O4B NAD sing 246 n n 
C4B C3B NAD sing 247 n n 
C4B H4B NAD sing 248 n n 
O4B C1B NAD sing 249 n n 
C3B O3B NAD sing 250 n n 
C3B C2B NAD sing 251 n n 
C3B H3B NAD sing 252 n n 
O3B HO3A NAD sing 253 n n 
C2B O2B NAD sing 254 n n 
C2B C1B NAD sing 255 n n 
C2B H2B NAD sing 256 n n 
O2B HO2A NAD sing 257 n n 
C1B N9A NAD sing 258 n n 
C1B H1B NAD sing 259 n n 
N9A C8A NAD sing 260 n y 
N9A C4A NAD sing 261 n y 
C8A N7A NAD doub 262 n y 
C8A H8A NAD sing 263 n n 
N7A C5A NAD sing 264 n y 
C5A C6A NAD sing 265 n y 
C5A C4A NAD doub 266 n y 
C6A N6A NAD sing 267 n n 
C6A N1A NAD doub 268 n y 
N6A H61A NAD sing 269 n n 
N6A H62A NAD sing 270 n n 
N1A C2A NAD sing 271 n y 
C2A N3A NAD doub 272 n y 
C2A H2A NAD sing 273 n n 
N3A C4A NAD sing 274 n y 
O3 PN NAD sing 275 n n 
PN O1N NAD doub 276 n n 
PN O2N NAD sing 277 n n 
PN O5D NAD sing 278 n n 
O5D C5D NAD sing 279 n n 
C5D C4D NAD sing 280 n n 
C5D H51N NAD sing 281 n n 
C5D H52N NAD sing 282 n n 
C4D O4D NAD sing 283 n n 
C4D C3D NAD sing 284 n n 
C4D H4D NAD sing 285 n n 
O4D C1D NAD sing 286 n n 
C3D O3D NAD sing 287 n n 
C3D C2D NAD sing 288 n n 
C3D H3D NAD sing 289 n n 
O3D HO3N NAD sing 290 n n 
C2D O2D NAD sing 291 n n 
C2D C1D NAD sing 292 n n 
C2D H2D NAD sing 293 n n 
O2D HO2N NAD sing 294 n n 
C1D N1N NAD sing 295 n n 
C1D H1D NAD sing 296 n n 
N1N C2N NAD sing 297 n y 
N1N C6N NAD doub 298 n y 
C2N C3N NAD doub 299 n y 
C2N H2N NAD sing 300 n n 
C3N C7N NAD sing 301 n n 
C3N C4N NAD sing 302 n y 
C7N O7N NAD doub 303 n n 
C7N N7N NAD sing 304 n n 
N7N H71N NAD sing 305 n n 
N7N H72N NAD sing 306 n n 
C4N C5N NAD doub 307 n y 
C4N H4N NAD sing 308 n n 
C5N C6N NAD sing 309 n y 
C5N H5N NAD sing 310 n n 
C6N H6N NAD sing 311 n n 
#
_atom_sites.entry_id                     3OIF 
_atom_sites.fract_transf_matrix[1][1]    0.015601 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011954 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004913 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAD A 1 501 501 NAD NAD . 
F 3 TCL A 1 502 502 TCL TCL . 
G 2 NAD D 1 601 601 NAD NAD . 
H 3 TCL D 1 602 602 TCL TCL . 
I 4 HOH A 1 267 267 HOH HOH . 
I 4 HOH A 2 268 268 HOH HOH . 
I 4 HOH A 3 269 269 HOH HOH . 
I 4 HOH A 4 270 270 HOH HOH . 
I 4 HOH A 5 271 271 HOH HOH . 
I 4 HOH A 6 272 272 HOH HOH . 
I 4 HOH A 7 273 273 HOH HOH . 
I 4 HOH A 8 274 274 HOH HOH . 
I 4 HOH A 9 275 275 HOH HOH . 
I 4 HOH A 10 276 276 HOH HOH . 
I 4 HOH A 11 277 277 HOH HOH . 
I 4 HOH A 12 278 278 HOH HOH . 
I 4 HOH A 13 279 279 HOH HOH . 
I 4 HOH A 14 280 280 HOH HOH . 
I 4 HOH A 15 281 281 HOH HOH . 
I 4 HOH A 16 282 282 HOH HOH . 
I 4 HOH A 17 283 283 HOH HOH . 
I 4 HOH A 18 284 284 HOH HOH . 
I 4 HOH A 19 286 286 HOH HOH . 
I 4 HOH A 20 287 287 HOH HOH . 
I 4 HOH A 21 288 288 HOH HOH . 
I 4 HOH A 22 289 289 HOH HOH . 
I 4 HOH A 23 290 290 HOH HOH . 
I 4 HOH A 24 291 291 HOH HOH . 
I 4 HOH A 25 292 292 HOH HOH . 
I 4 HOH A 26 295 295 HOH HOH . 
I 4 HOH A 27 296 296 HOH HOH . 
I 4 HOH A 28 297 297 HOH HOH . 
I 4 HOH A 29 298 298 HOH HOH . 
I 4 HOH A 30 299 299 HOH HOH . 
J 4 HOH B 1 267 267 HOH HOH . 
J 4 HOH B 2 268 268 HOH HOH . 
J 4 HOH B 3 269 269 HOH HOH . 
J 4 HOH B 4 270 270 HOH HOH . 
J 4 HOH B 5 271 271 HOH HOH . 
J 4 HOH B 6 272 272 HOH HOH . 
J 4 HOH B 7 273 273 HOH HOH . 
J 4 HOH B 8 274 274 HOH HOH . 
J 4 HOH B 9 275 275 HOH HOH . 
J 4 HOH B 10 276 276 HOH HOH . 
J 4 HOH B 11 277 277 HOH HOH . 
J 4 HOH B 12 278 278 HOH HOH . 
J 4 HOH B 13 279 279 HOH HOH . 
J 4 HOH B 14 280 280 HOH HOH . 
J 4 HOH B 15 281 281 HOH HOH . 
J 4 HOH B 16 283 283 HOH HOH . 
J 4 HOH B 17 284 284 HOH HOH . 
J 4 HOH B 18 285 285 HOH HOH . 
J 4 HOH B 19 286 286 HOH HOH . 
J 4 HOH B 20 287 287 HOH HOH . 
J 4 HOH B 21 288 288 HOH HOH . 
J 4 HOH B 22 289 289 HOH HOH . 
J 4 HOH B 23 290 290 HOH HOH . 
J 4 HOH B 24 291 291 HOH HOH . 
J 4 HOH B 25 292 292 HOH HOH . 
J 4 HOH B 26 293 293 HOH HOH . 
J 4 HOH B 27 294 294 HOH HOH . 
J 4 HOH B 28 295 295 HOH HOH . 
J 4 HOH B 29 296 296 HOH HOH . 
J 4 HOH B 30 297 297 HOH HOH . 
J 4 HOH B 31 298 298 HOH HOH . 
J 4 HOH B 32 299 299 HOH HOH . 
J 4 HOH B 33 300 300 HOH HOH . 
J 4 HOH B 34 301 301 HOH HOH . 
J 4 HOH B 35 302 302 HOH HOH . 
J 4 HOH B 36 303 303 HOH HOH . 
J 4 HOH B 37 304 304 HOH HOH . 
J 4 HOH B 38 305 305 HOH HOH . 
K 4 HOH C 1 267 267 HOH HOH . 
K 4 HOH C 2 268 268 HOH HOH . 
K 4 HOH C 3 269 269 HOH HOH . 
K 4 HOH C 4 270 270 HOH HOH . 
K 4 HOH C 5 271 271 HOH HOH . 
K 4 HOH C 6 272 272 HOH HOH . 
K 4 HOH C 7 274 274 HOH HOH . 
K 4 HOH C 8 275 275 HOH HOH . 
K 4 HOH C 9 276 276 HOH HOH . 
K 4 HOH C 10 277 277 HOH HOH . 
K 4 HOH C 11 278 278 HOH HOH . 
K 4 HOH C 12 279 279 HOH HOH . 
K 4 HOH C 13 280 280 HOH HOH . 
K 4 HOH C 14 281 281 HOH HOH . 
K 4 HOH C 15 282 282 HOH HOH . 
K 4 HOH C 16 283 283 HOH HOH . 
K 4 HOH C 17 284 284 HOH HOH . 
K 4 HOH C 18 285 285 HOH HOH . 
K 4 HOH C 19 286 286 HOH HOH . 
K 4 HOH C 20 287 287 HOH HOH . 
K 4 HOH C 21 288 288 HOH HOH . 
K 4 HOH C 22 289 289 HOH HOH . 
K 4 HOH C 23 290 290 HOH HOH . 
K 4 HOH C 24 291 291 HOH HOH . 
K 4 HOH C 25 293 293 HOH HOH . 
K 4 HOH C 26 294 294 HOH HOH . 
K 4 HOH C 27 295 295 HOH HOH . 
K 4 HOH C 28 296 296 HOH HOH . 
K 4 HOH C 29 297 297 HOH HOH . 
K 4 HOH C 30 298 298 HOH HOH . 
K 4 HOH C 31 299 299 HOH HOH . 
K 4 HOH C 32 301 301 HOH HOH . 
K 4 HOH C 33 302 302 HOH HOH . 
K 4 HOH C 34 303 303 HOH HOH . 
K 4 HOH C 35 304 304 HOH HOH . 
L 4 HOH D 1 267 267 HOH HOH . 
L 4 HOH D 2 268 268 HOH HOH . 
L 4 HOH D 3 269 269 HOH HOH . 
L 4 HOH D 4 270 270 HOH HOH . 
L 4 HOH D 5 271 271 HOH HOH . 
L 4 HOH D 6 272 272 HOH HOH . 
L 4 HOH D 7 273 273 HOH HOH . 
L 4 HOH D 8 274 274 HOH HOH . 
L 4 HOH D 9 275 275 HOH HOH . 
L 4 HOH D 10 276 276 HOH HOH . 
L 4 HOH D 11 277 277 HOH HOH . 
L 4 HOH D 12 278 278 HOH HOH . 
L 4 HOH D 13 279 279 HOH HOH . 
L 4 HOH D 14 280 280 HOH HOH . 
L 4 HOH D 15 281 281 HOH HOH . 
L 4 HOH D 16 282 282 HOH HOH . 
L 4 HOH D 17 283 283 HOH HOH . 
L 4 HOH D 18 284 284 HOH HOH . 
L 4 HOH D 19 285 285 HOH HOH . 
L 4 HOH D 20 286 286 HOH HOH . 
L 4 HOH D 21 288 288 HOH HOH . 
L 4 HOH D 22 289 289 HOH HOH . 
L 4 HOH D 23 290 290 HOH HOH . 
L 4 HOH D 24 291 291 HOH HOH . 
L 4 HOH D 25 292 292 HOH HOH . 
L 4 HOH D 26 293 293 HOH HOH . 
L 4 HOH D 27 294 294 HOH HOH . 
L 4 HOH D 28 295 295 HOH HOH . 
L 4 HOH D 29 305 305 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAD . . . E 2 38.246 42.559 101.574 1 55.74 ? PA NAD 501 A 1 
HETATM 2 O O1A NAD . . . E 2 38.245 41.217 102.201 1 57.1 ? O1A NAD 501 A 1 
HETATM 3 O O2A NAD . . . E 2 38.779 43.615 102.473 1 55.77 ? O2A NAD 501 A 1 
HETATM 4 O O5B NAD . . . E 2 36.736 42.832 101.04 1 53.97 ? O5B NAD 501 A 1 
HETATM 5 C C5B NAD . . . E 2 35.953 41.847 100.39 1 52.71 ? C5B NAD 501 A 1 
HETATM 6 C C4B NAD . . . E 2 34.55 42.08 100.935 1 54.78 ? C4B NAD 501 A 1 
HETATM 7 O O4B NAD . . . E 2 33.469 41.35 100.326 1 53.98 ? O4B NAD 501 A 1 
HETATM 8 C C3B NAD . . . E 2 34.547 41.764 102.421 1 54.56 ? C3B NAD 501 A 1 
HETATM 9 O O3B NAD . . . E 2 34.201 42.934 103.098 1 56.59 ? O3B NAD 501 A 1 
HETATM 10 C C2B NAD . . . E 2 33.437 40.764 102.587 1 54.33 ? C2B NAD 501 A 1 
HETATM 11 O O2B NAD . . . E 2 32.798 40.919 103.841 1 55.89 ? O2B NAD 501 A 1 
HETATM 12 C C1B NAD . . . E 2 32.553 41.084 101.373 1 52.71 ? C1B NAD 501 A 1 
HETATM 13 N N9A NAD . . . E 2 31.659 39.952 101.091 1 50.47 ? N9A NAD 501 A 1 
HETATM 14 C C8A NAD . . . E 2 32.034 38.633 100.908 1 51.02 ? C8A NAD 501 A 1 
HETATM 15 N N7A NAD . . . E 2 30.931 37.876 100.696 1 49.54 ? N7A NAD 501 A 1 
HETATM 16 C C5A NAD . . . E 2 29.855 38.701 100.739 1 48.7 ? C5A NAD 501 A 1 
HETATM 17 C C6A NAD . . . E 2 28.499 38.434 100.608 1 47.74 ? C6A NAD 501 A 1 
HETATM 18 N N6A NAD . . . E 2 28.119 37.276 101.145 1 46.35 ? N6A NAD 501 A 1 
HETATM 19 N N1A NAD . . . E 2 27.61 39.502 100.693 1 47.25 ? N1A NAD 501 A 1 
HETATM 20 C C2A NAD . . . E 2 28.047 40.788 100.947 1 47.31 ? C2A NAD 501 A 1 
HETATM 21 N N3A NAD . . . E 2 29.404 41.037 101.098 1 49.61 ? N3A NAD 501 A 1 
HETATM 22 C C4A NAD . . . E 2 30.294 40.005 101.003 1 49.18 ? C4A NAD 501 A 1 
HETATM 23 O O3 NAD . . . E 2 39.258 42.445 100.318 1 54.66 ? O3 NAD 501 A 1 
HETATM 24 P PN NAD . . . E 2 39.419 43.435 99.054 1 51.42 ? PN NAD 501 A 1 
HETATM 25 O O1N NAD . . . E 2 40.688 43.031 98.398 1 53.62 ? O1N NAD 501 A 1 
HETATM 26 O O2N NAD . . . E 2 39.243 44.856 99.442 1 51.03 ? O2N NAD 501 A 1 
HETATM 27 O O5D NAD . . . E 2 38.213 42.933 98.105 1 51.02 ? O5D NAD 501 A 1 
HETATM 28 C C5D NAD . . . E 2 37.252 43.846 97.615 1 50.63 ? C5D NAD 501 A 1 
HETATM 29 C C4D NAD . . . E 2 37.282 43.855 96.095 1 50 ? C4D NAD 501 A 1 
HETATM 30 O O4D NAD . . . E 2 38.535 44.301 95.592 1 48.01 ? O4D NAD 501 A 1 
HETATM 31 C C3D NAD . . . E 2 37.077 42.437 95.572 1 50.07 ? C3D NAD 501 A 1 
HETATM 32 O O3D NAD . . . E 2 36.156 42.439 94.485 1 49.24 ? O3D NAD 501 A 1 
HETATM 33 C C2D NAD . . . E 2 38.464 42.034 95.119 1 48.69 ? C2D NAD 501 A 1 
HETATM 34 O O2D NAD . . . E 2 38.377 41.064 94.111 1 49.32 ? O2D NAD 501 A 1 
HETATM 35 C C1D NAD . . . E 2 38.981 43.37 94.618 1 48.89 ? C1D NAD 501 A 1 
HETATM 36 N N1N NAD . . . E 2 40.434 43.432 94.394 1 49.71 ? N1N NAD 501 A 1 
HETATM 37 C C2N NAD . . . E 2 41.349 43.368 95.424 1 50.87 ? C2N NAD 501 A 1 
HETATM 38 C C3N NAD . . . E 2 42.725 43.451 95.159 1 52.01 ? C3N NAD 501 A 1 
HETATM 39 C C7N NAD . . . E 2 43.769 43.338 96.25 1 51.84 ? C7N NAD 501 A 1 
HETATM 40 O O7N NAD . . . E 2 45.066 42.963 95.879 1 52.84 ? O7N NAD 501 A 1 
HETATM 41 N N7N NAD . . . E 2 43.499 43.575 97.526 1 50.49 ? N7N NAD 501 A 1 
HETATM 42 C C4N NAD . . . E 2 43.156 43.597 93.84 1 50.37 ? C4N NAD 501 A 1 
HETATM 43 C C5N NAD . . . E 2 42.217 43.658 92.822 1 50.34 ? C5N NAD 501 A 1 
HETATM 44 C C6N NAD . . . E 2 40.856 43.579 93.108 1 49.6 ? C6N NAD 501 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    22 
_model_server_stats.query_time_ms           335 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           44 
#