data_3OIR # _model_server_result.job_id 5sGhocDHMUNLBeNZk2-kxg _model_server_result.datetime_utc '2024-10-20 23:34:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oir # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":601}' # _entry.id 3OIR # _exptl.entry_id 3OIR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 46.025 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FORMIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OIR _cell.length_a 71.804 _cell.length_b 105.423 _cell.length_c 37.698 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OIR _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,I 1 1 B,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ARG 58 A ARG 488 1_555 A N MSE 59 A MSE 489 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.32 ? covale ? covale2 A C ARG 58 A ARG 488 1_555 A N MSE 59 A MSE 489 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MSE 59 A MSE 489 1_555 A N ARG 60 A ARG 490 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale4 A C MSE 59 A MSE 489 1_555 A N ARG 60 A ARG 490 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C GLY 69 A GLY 499 1_555 A N MSE 70 A MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale6 A C MSE 70 A MSE 500 1_555 A N HIS 71 A HIS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale7 B C GLY 8 B GLY 438 1_555 B N MSE 9 B MSE 439 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.33 ? covale ? covale8 B C GLY 8 B GLY 438 1_555 B N MSE 9 B MSE 439 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.33 ? covale ? covale9 B C MSE 9 B MSE 439 1_555 B N ASP 10 B ASP 440 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale10 B C MSE 9 B MSE 439 1_555 B N ASP 10 B ASP 440 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 B C ARG 58 B ARG 488 1_555 B N MSE 59 B MSE 489 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.319 ? covale ? covale12 B C ARG 58 B ARG 488 1_555 B N MSE 59 B MSE 489 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.332 ? covale ? covale13 B C MSE 59 B MSE 489 1_555 B N ARG 60 B ARG 490 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale14 B C MSE 59 B MSE 489 1_555 B N ARG 60 B ARG 490 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale15 B C GLY 69 B GLY 499 1_555 B N MSE 70 B MSE 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale16 B C MSE 70 B MSE 500 1_555 B N HIS 71 B HIS 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? # _chem_comp.formula 'C H2 O2' _chem_comp.formula_weight 46.025 _chem_comp.id FMT _chem_comp.mon_nstd_flag . _chem_comp.name 'FORMIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OIR _atom_sites.fract_transf_matrix[1][1] 0.013927 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009486 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026527 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMT A 1 601 601 FMT FMT . D 2 FMT A 1 602 602 FMT FMT . E 2 FMT A 1 603 603 FMT FMT . F 3 CL A 1 604 604 CL CL . G 2 FMT B 1 601 601 FMT FMT . H 3 CL B 1 602 602 CL CL . I 4 HOH A 1 1 1 HOH HOH . I 4 HOH A 2 3 3 HOH HOH . I 4 HOH A 3 5 5 HOH HOH . I 4 HOH A 4 7 7 HOH HOH . I 4 HOH A 5 8 8 HOH HOH . I 4 HOH A 6 9 9 HOH HOH . I 4 HOH A 7 10 10 HOH HOH . I 4 HOH A 8 12 12 HOH HOH . I 4 HOH A 9 13 13 HOH HOH . I 4 HOH A 10 15 15 HOH HOH . I 4 HOH A 11 16 16 HOH HOH . I 4 HOH A 12 17 17 HOH HOH . I 4 HOH A 13 21 21 HOH HOH . I 4 HOH A 14 24 24 HOH HOH . I 4 HOH A 15 26 26 HOH HOH . I 4 HOH A 16 27 27 HOH HOH . I 4 HOH A 17 31 31 HOH HOH . I 4 HOH A 18 32 32 HOH HOH . I 4 HOH A 19 36 36 HOH HOH . I 4 HOH A 20 38 38 HOH HOH . I 4 HOH A 21 40 40 HOH HOH . I 4 HOH A 22 42 42 HOH HOH . I 4 HOH A 23 45 45 HOH HOH . I 4 HOH A 24 46 46 HOH HOH . I 4 HOH A 25 51 51 HOH HOH . I 4 HOH A 26 55 55 HOH HOH . I 4 HOH A 27 56 56 HOH HOH . I 4 HOH A 28 59 59 HOH HOH . I 4 HOH A 29 61 61 HOH HOH . I 4 HOH A 30 62 62 HOH HOH . I 4 HOH A 31 63 63 HOH HOH . I 4 HOH A 32 64 64 HOH HOH . I 4 HOH A 33 67 67 HOH HOH . I 4 HOH A 34 69 69 HOH HOH . I 4 HOH A 35 70 70 HOH HOH . I 4 HOH A 36 72 72 HOH HOH . I 4 HOH A 37 74 74 HOH HOH . I 4 HOH A 38 81 81 HOH HOH . I 4 HOH A 39 82 82 HOH HOH . I 4 HOH A 40 83 83 HOH HOH . I 4 HOH A 41 84 84 HOH HOH . I 4 HOH A 42 90 90 HOH HOH . I 4 HOH A 43 95 95 HOH HOH . I 4 HOH A 44 97 97 HOH HOH . I 4 HOH A 45 100 100 HOH HOH . I 4 HOH A 46 102 102 HOH HOH . I 4 HOH A 47 105 105 HOH HOH . I 4 HOH A 48 106 106 HOH HOH . I 4 HOH A 49 107 107 HOH HOH . I 4 HOH A 50 108 108 HOH HOH . I 4 HOH A 51 110 110 HOH HOH . I 4 HOH A 52 111 111 HOH HOH . I 4 HOH A 53 113 113 HOH HOH . I 4 HOH A 54 118 118 HOH HOH . I 4 HOH A 55 121 121 HOH HOH . I 4 HOH A 56 122 122 HOH HOH . I 4 HOH A 57 123 123 HOH HOH . I 4 HOH A 58 127 127 HOH HOH . I 4 HOH A 59 130 130 HOH HOH . I 4 HOH A 60 132 132 HOH HOH . I 4 HOH A 61 134 134 HOH HOH . I 4 HOH A 62 135 135 HOH HOH . J 4 HOH B 1 2 2 HOH HOH . J 4 HOH B 2 4 4 HOH HOH . J 4 HOH B 3 6 6 HOH HOH . J 4 HOH B 4 11 11 HOH HOH . J 4 HOH B 5 14 14 HOH HOH . J 4 HOH B 6 18 18 HOH HOH . J 4 HOH B 7 19 19 HOH HOH . J 4 HOH B 8 20 20 HOH HOH . J 4 HOH B 9 22 22 HOH HOH . J 4 HOH B 10 23 23 HOH HOH . J 4 HOH B 11 25 25 HOH HOH . J 4 HOH B 12 28 28 HOH HOH . J 4 HOH B 13 29 29 HOH HOH . J 4 HOH B 14 30 30 HOH HOH . J 4 HOH B 15 33 33 HOH HOH . J 4 HOH B 16 34 34 HOH HOH . J 4 HOH B 17 35 35 HOH HOH . J 4 HOH B 18 37 37 HOH HOH . J 4 HOH B 19 39 39 HOH HOH . J 4 HOH B 20 41 41 HOH HOH . J 4 HOH B 21 43 43 HOH HOH . J 4 HOH B 22 44 44 HOH HOH . J 4 HOH B 23 47 47 HOH HOH . J 4 HOH B 24 48 48 HOH HOH . J 4 HOH B 25 49 49 HOH HOH . J 4 HOH B 26 50 50 HOH HOH . J 4 HOH B 27 52 52 HOH HOH . J 4 HOH B 28 53 53 HOH HOH . J 4 HOH B 29 54 54 HOH HOH . J 4 HOH B 30 57 57 HOH HOH . J 4 HOH B 31 58 58 HOH HOH . J 4 HOH B 32 60 60 HOH HOH . J 4 HOH B 33 65 65 HOH HOH . J 4 HOH B 34 66 66 HOH HOH . J 4 HOH B 35 68 68 HOH HOH . J 4 HOH B 36 71 71 HOH HOH . J 4 HOH B 37 73 73 HOH HOH . J 4 HOH B 38 75 75 HOH HOH . J 4 HOH B 39 76 76 HOH HOH . J 4 HOH B 40 77 77 HOH HOH . J 4 HOH B 41 78 78 HOH HOH . J 4 HOH B 42 79 79 HOH HOH . J 4 HOH B 43 80 80 HOH HOH . J 4 HOH B 44 85 85 HOH HOH . J 4 HOH B 45 86 86 HOH HOH . J 4 HOH B 46 87 87 HOH HOH . J 4 HOH B 47 88 88 HOH HOH . J 4 HOH B 48 89 89 HOH HOH . J 4 HOH B 49 91 91 HOH HOH . J 4 HOH B 50 92 92 HOH HOH . J 4 HOH B 51 93 93 HOH HOH . J 4 HOH B 52 94 94 HOH HOH . J 4 HOH B 53 96 96 HOH HOH . J 4 HOH B 54 98 98 HOH HOH . J 4 HOH B 55 99 99 HOH HOH . J 4 HOH B 56 101 101 HOH HOH . J 4 HOH B 57 103 103 HOH HOH . J 4 HOH B 58 104 104 HOH HOH . J 4 HOH B 59 109 109 HOH HOH . J 4 HOH B 60 112 112 HOH HOH . J 4 HOH B 61 114 114 HOH HOH . J 4 HOH B 62 115 115 HOH HOH . J 4 HOH B 63 116 116 HOH HOH . J 4 HOH B 64 117 117 HOH HOH . J 4 HOH B 65 119 119 HOH HOH . J 4 HOH B 66 120 120 HOH HOH . J 4 HOH B 67 124 124 HOH HOH . J 4 HOH B 68 125 125 HOH HOH . J 4 HOH B 69 126 126 HOH HOH . J 4 HOH B 70 128 128 HOH HOH . J 4 HOH B 71 129 129 HOH HOH . J 4 HOH B 72 131 131 HOH HOH . J 4 HOH B 73 133 133 HOH HOH . J 4 HOH B 74 136 136 HOH HOH . J 4 HOH B 75 137 137 HOH HOH . J 4 HOH B 76 138 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C FMT . . . G 2 51.397 27.356 49.458 1 21.34 ? C FMT 601 B 1 HETATM 2 O O1 FMT . . . G 2 52.537 26.898 49.536 1 20.97 ? O1 FMT 601 B 1 HETATM 3 O O2 FMT . . . G 2 50.445 26.944 50.118 1 21.66 ? O2 FMT 601 B 1 # _model_server_stats.io_time_ms 41 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 3 #