data_3OIU # _model_server_result.job_id 1M4k4Jy1nPCgbNbpjp_WuA _model_server_result.datetime_utc '2024-11-02 02:27:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oiu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":167}' # _entry.id 3OIU # _exptl.entry_id 3OIU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3OIU _cell.length_a 87.985 _cell.length_b 87.985 _cell.length_c 135.146 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I 1 1 A,B,C,D,E,F,G,H,I 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLU 3 A GLU 3 1_555 G CA CA . A CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc2 A OG SER 17 A SER 17 1_555 D MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc3 A O PHE 28 A PHE 28 1_555 C CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc4 A OD1 ASP 30 A ASP 30 1_555 C CA CA . A CA 167 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc5 A OG1 THR 35 A THR 35 1_555 D MG MG . A MG 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.107 ? metalc ? metalc6 A OE2 GLU 76 A GLU 76 1_555 G CA CA . A CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.576 ? metalc ? metalc7 A OE1 GLU 76 A GLU 76 1_555 G CA CA . A CA 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.955 ? metalc ? metalc8 A O ASP 107 A ASP 107 1_555 F CA CA . A CA 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc9 A O TYR 137 A TYR 137 1_555 F CA CA . A CA 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.42 ? metalc ? metalc10 C CA CA . A CA 167 1_555 I O HOH . A HOH 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.398 ? metalc ? metalc11 D MG MG . A MG 168 1_555 I O HOH . A HOH 172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.128 ? metalc ? metalc12 D MG MG . A MG 168 1_555 I O HOH . A HOH 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc13 D MG MG . A MG 168 1_555 B O2G GNP . A GNP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? metalc ? metalc14 D MG MG . A MG 168 1_555 B O2B GNP . A GNP 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.079 ? metalc ? metalc15 E MG MG . A MG 169 1_555 I O HOH . A HOH 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc16 E MG MG . A MG 169 1_555 I O HOH . A HOH 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc17 F CA CA . A CA 170 1_555 I O HOH . A HOH 232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc18 F CA CA . A CA 170 1_555 I O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.606 ? metalc ? metalc19 F CA CA . A CA 170 1_555 I O HOH . A HOH 392 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc20 F CA CA . A CA 170 1_555 H O ACT . A ACT 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc21 F CA CA . A CA 170 1_555 H OXT ACT . A ACT 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.575 ? metalc ? metalc22 G CA CA . A CA 171 1_555 I O HOH . A HOH 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.683 ? metalc ? metalc23 G CA CA . A CA 171 1_555 I O HOH . A HOH 268 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.901 ? metalc ? metalc24 G CA CA . A CA 171 1_555 I O HOH . A HOH 276 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.99 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OIU _atom_sites.fract_transf_matrix[1][1] 0.011366 _atom_sites.fract_transf_matrix[1][2] 0.006562 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013124 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007399 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GNP A 1 201 201 GNP GNP . C 3 CA A 1 167 1 CA CA . D 4 MG A 1 168 2 MG MG . E 4 MG A 1 169 3 MG MG . F 3 CA A 1 170 4 CA CA . G 3 CA A 1 171 5 CA CA . H 5 ACT A 1 719 719 ACT ACT . I 6 HOH A 1 172 172 HOH HOH . I 6 HOH A 2 173 173 HOH HOH . I 6 HOH A 3 175 175 HOH HOH . I 6 HOH A 4 176 176 HOH HOH . I 6 HOH A 5 177 177 HOH HOH . I 6 HOH A 6 178 178 HOH HOH . I 6 HOH A 7 179 179 HOH HOH . I 6 HOH A 8 180 180 HOH HOH . I 6 HOH A 9 182 182 HOH HOH . I 6 HOH A 10 183 183 HOH HOH . I 6 HOH A 11 184 184 HOH HOH . I 6 HOH A 12 185 185 HOH HOH . I 6 HOH A 13 188 188 HOH HOH . I 6 HOH A 14 191 191 HOH HOH . I 6 HOH A 15 192 192 HOH HOH . I 6 HOH A 16 193 193 HOH HOH . I 6 HOH A 17 194 194 HOH HOH . I 6 HOH A 18 195 195 HOH HOH . I 6 HOH A 19 197 197 HOH HOH . I 6 HOH A 20 198 198 HOH HOH . I 6 HOH A 21 199 199 HOH HOH . I 6 HOH A 22 200 200 HOH HOH . I 6 HOH A 23 202 202 HOH HOH . I 6 HOH A 24 203 203 HOH HOH . I 6 HOH A 25 204 204 HOH HOH . I 6 HOH A 26 205 205 HOH HOH . I 6 HOH A 27 207 207 HOH HOH . I 6 HOH A 28 208 208 HOH HOH . I 6 HOH A 29 209 209 HOH HOH . I 6 HOH A 30 210 210 HOH HOH . I 6 HOH A 31 211 211 HOH HOH . I 6 HOH A 32 212 212 HOH HOH . I 6 HOH A 33 213 213 HOH HOH . I 6 HOH A 34 214 214 HOH HOH . I 6 HOH A 35 215 215 HOH HOH . I 6 HOH A 36 217 217 HOH HOH . I 6 HOH A 37 218 218 HOH HOH . I 6 HOH A 38 219 219 HOH HOH . I 6 HOH A 39 220 220 HOH HOH . I 6 HOH A 40 221 221 HOH HOH . I 6 HOH A 41 222 222 HOH HOH . I 6 HOH A 42 224 224 HOH HOH . I 6 HOH A 43 226 226 HOH HOH . I 6 HOH A 44 228 228 HOH HOH . I 6 HOH A 45 229 229 HOH HOH . I 6 HOH A 46 230 230 HOH HOH . I 6 HOH A 47 231 231 HOH HOH . I 6 HOH A 48 232 232 HOH HOH . I 6 HOH A 49 234 234 HOH HOH . I 6 HOH A 50 235 235 HOH HOH . I 6 HOH A 51 236 236 HOH HOH . I 6 HOH A 52 239 239 HOH HOH . I 6 HOH A 53 240 240 HOH HOH . I 6 HOH A 54 241 241 HOH HOH . I 6 HOH A 55 242 242 HOH HOH . I 6 HOH A 56 243 243 HOH HOH . I 6 HOH A 57 244 244 HOH HOH . I 6 HOH A 58 245 245 HOH HOH . I 6 HOH A 59 246 246 HOH HOH . I 6 HOH A 60 247 247 HOH HOH . I 6 HOH A 61 248 248 HOH HOH . I 6 HOH A 62 249 249 HOH HOH . I 6 HOH A 63 250 250 HOH HOH . I 6 HOH A 64 251 251 HOH HOH . I 6 HOH A 65 252 252 HOH HOH . I 6 HOH A 66 253 253 HOH HOH . I 6 HOH A 67 254 254 HOH HOH . I 6 HOH A 68 255 255 HOH HOH . I 6 HOH A 69 256 256 HOH HOH . I 6 HOH A 70 257 257 HOH HOH . I 6 HOH A 71 258 258 HOH HOH . I 6 HOH A 72 259 259 HOH HOH . I 6 HOH A 73 260 260 HOH HOH . I 6 HOH A 74 261 261 HOH HOH . I 6 HOH A 75 262 262 HOH HOH . I 6 HOH A 76 264 264 HOH HOH . I 6 HOH A 77 265 265 HOH HOH . I 6 HOH A 78 266 266 HOH HOH . I 6 HOH A 79 268 268 HOH HOH . I 6 HOH A 80 271 271 HOH HOH . I 6 HOH A 81 273 273 HOH HOH . I 6 HOH A 82 275 275 HOH HOH . I 6 HOH A 83 276 276 HOH HOH . I 6 HOH A 84 277 277 HOH HOH . I 6 HOH A 85 278 278 HOH HOH . I 6 HOH A 86 279 279 HOH HOH . I 6 HOH A 87 280 280 HOH HOH . I 6 HOH A 88 282 282 HOH HOH . I 6 HOH A 89 283 283 HOH HOH . I 6 HOH A 90 284 284 HOH HOH . I 6 HOH A 91 286 286 HOH HOH . I 6 HOH A 92 287 287 HOH HOH . I 6 HOH A 93 288 288 HOH HOH . I 6 HOH A 94 289 289 HOH HOH . I 6 HOH A 95 290 290 HOH HOH . I 6 HOH A 96 291 291 HOH HOH . I 6 HOH A 97 293 293 HOH HOH . I 6 HOH A 98 295 295 HOH HOH . I 6 HOH A 99 297 297 HOH HOH . I 6 HOH A 100 298 298 HOH HOH . I 6 HOH A 101 299 299 HOH HOH . I 6 HOH A 102 300 300 HOH HOH . I 6 HOH A 103 301 301 HOH HOH . I 6 HOH A 104 302 302 HOH HOH . I 6 HOH A 105 304 304 HOH HOH . I 6 HOH A 106 305 305 HOH HOH . I 6 HOH A 107 306 306 HOH HOH . I 6 HOH A 108 307 307 HOH HOH . I 6 HOH A 109 308 308 HOH HOH . I 6 HOH A 110 309 309 HOH HOH . I 6 HOH A 111 364 364 HOH HOH . I 6 HOH A 112 366 366 HOH HOH . I 6 HOH A 113 372 372 HOH HOH . I 6 HOH A 114 373 373 HOH HOH . I 6 HOH A 115 376 376 HOH HOH . I 6 HOH A 116 382 382 HOH HOH . I 6 HOH A 117 384 384 HOH HOH . I 6 HOH A 118 391 391 HOH HOH . I 6 HOH A 119 392 392 HOH HOH . I 6 HOH A 120 394 394 HOH HOH . I 6 HOH A 121 398 398 HOH HOH . I 6 HOH A 122 399 399 HOH HOH . I 6 HOH A 123 404 404 HOH HOH . I 6 HOH A 124 405 405 HOH HOH . I 6 HOH A 125 407 407 HOH HOH . I 6 HOH A 126 422 422 HOH HOH . I 6 HOH A 127 435 435 HOH HOH . I 6 HOH A 128 439 439 HOH HOH . I 6 HOH A 129 442 442 HOH HOH . I 6 HOH A 130 464 464 HOH HOH . I 6 HOH A 131 471 471 HOH HOH . I 6 HOH A 132 472 171 HOH HOH . I 6 HOH A 133 473 201 HOH HOH . I 6 HOH A 134 478 478 HOH HOH . I 6 HOH A 135 483 483 HOH HOH . I 6 HOH A 136 489 489 HOH HOH . I 6 HOH A 137 491 491 HOH HOH . I 6 HOH A 138 493 493 HOH HOH . I 6 HOH A 139 494 494 HOH HOH . I 6 HOH A 140 496 496 HOH HOH . I 6 HOH A 141 497 497 HOH HOH . I 6 HOH A 142 498 498 HOH HOH . I 6 HOH A 143 504 504 HOH HOH . I 6 HOH A 144 583 583 HOH HOH . I 6 HOH A 145 700 700 HOH HOH . I 6 HOH A 146 701 701 HOH HOH . I 6 HOH A 147 757 757 HOH HOH . I 6 HOH A 148 758 758 HOH HOH . I 6 HOH A 149 759 759 HOH HOH . I 6 HOH A 150 760 760 HOH HOH . I 6 HOH A 151 761 761 HOH HOH . I 6 HOH A 152 762 762 HOH HOH . I 6 HOH A 153 763 763 HOH HOH . I 6 HOH A 154 764 764 HOH HOH . I 6 HOH A 155 765 765 HOH HOH . I 6 HOH A 156 766 766 HOH HOH . I 6 HOH A 157 767 767 HOH HOH . I 6 HOH A 158 768 768 HOH HOH . I 6 HOH A 159 769 769 HOH HOH . I 6 HOH A 160 770 770 HOH HOH . I 6 HOH A 161 771 771 HOH HOH . I 6 HOH A 162 772 772 HOH HOH . I 6 HOH A 163 773 773 HOH HOH . I 6 HOH A 164 774 774 HOH HOH . I 6 HOH A 165 775 775 HOH HOH . I 6 HOH A 166 776 776 HOH HOH . I 6 HOH A 167 777 777 HOH HOH . I 6 HOH A 168 778 778 HOH HOH . I 6 HOH A 169 779 779 HOH HOH . I 6 HOH A 170 780 780 HOH HOH . I 6 HOH A 171 781 781 HOH HOH . I 6 HOH A 172 782 782 HOH HOH . I 6 HOH A 173 783 783 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 26.237 _atom_site.Cartn_y 10.25 _atom_site.Cartn_z 27.552 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 13.52 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 167 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #