data_3OJ3 # _model_server_result.job_id C-aD2TJojDVwlvY0oOemOA _model_server_result.datetime_utc '2024-10-25 20:23:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oj3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":905}' # _entry.id 3OJ3 # _exptl.entry_id 3OJ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.1 _cell.angle_gamma 90 _cell.entry_id 3OJ3 _cell.length_a 42.83 _cell.length_b 170.03 _cell.length_c 66.239 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OJ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 ? dimeric 2 author_defined_assembly 2 ? dimeric 2 author_defined_assembly 3 ? dimeric 2 author_defined_assembly 4 ? dimeric 2 author_defined_assembly 5 ? dimeric 2 author_defined_assembly 6 ? dimeric 2 author_defined_assembly 7 ? dimeric 2 author_defined_assembly 8 ? tetrameric 4 author_defined_assembly 9 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,Q,Y,GA 1 1 B,J,R,Z,HA 2 1 C,K,S,AA,IA 3 1 D,L,T,BA,JA 4 1 E,M,U,CA,KA 5 1 F,N,V,DA,LA 6 1 G,O,W,EA,MA 7 1 H,P,X,FA,NA 8 1 A,C,D,I,Q,Y,AA,BA,GA 9 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 Q N N ? 3 R N N ? 3 S N N ? 3 T N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 X N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 I SG CYS 21 I CYS 607 1_555 Q ZN ZN . I ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc2 I SG CYS 26 I CYS 612 1_555 Q ZN ZN . I ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc3 I SG CYS 38 I CYS 624 1_555 Q ZN ZN . I ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.676 ? metalc ? metalc4 I SG CYS 41 I CYS 627 1_555 Q ZN ZN . I ZN 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc5 J SG CYS 21 J CYS 607 1_555 R ZN ZN . J ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 J SG CYS 26 J CYS 612 1_555 R ZN ZN . J ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc7 J SG CYS 38 J CYS 624 1_555 R ZN ZN . J ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.539 ? metalc ? metalc8 J SG CYS 41 J CYS 627 1_555 R ZN ZN . J ZN 902 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.417 ? metalc ? metalc9 K SG CYS 21 K CYS 607 1_555 S ZN ZN . K ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc10 K SG CYS 26 K CYS 612 1_555 S ZN ZN . K ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? metalc ? metalc11 K SG CYS 38 K CYS 624 1_555 S ZN ZN . K ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc12 K SG CYS 41 K CYS 627 1_555 S ZN ZN . K ZN 903 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? metalc ? metalc13 L SG CYS 21 L CYS 607 1_555 T ZN ZN . L ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc14 L SG CYS 26 L CYS 612 1_555 T ZN ZN . L ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc15 L SG CYS 38 L CYS 624 1_555 T ZN ZN . L ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.556 ? metalc ? metalc16 L SG CYS 41 L CYS 627 1_555 T ZN ZN . L ZN 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc17 M SG CYS 21 M CYS 607 1_555 U ZN ZN . M ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc18 M SG CYS 26 M CYS 612 1_555 U ZN ZN . M ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.227 ? metalc ? metalc19 M SG CYS 38 M CYS 624 1_555 U ZN ZN . M ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.801 ? metalc ? metalc20 M SG CYS 41 M CYS 627 1_555 U ZN ZN . M ZN 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.294 ? metalc ? metalc21 N SG CYS 21 N CYS 607 1_555 V ZN ZN . N ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc22 N SG CYS 26 N CYS 612 1_555 V ZN ZN . N ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? metalc ? metalc23 N SG CYS 38 N CYS 624 1_555 V ZN ZN . N ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.735 ? metalc ? metalc24 N SG CYS 41 N CYS 627 1_555 V ZN ZN . N ZN 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc25 O SG CYS 21 O CYS 607 1_555 W ZN ZN . O ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.247 ? metalc ? metalc26 O SG CYS 26 O CYS 612 1_555 W ZN ZN . O ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc27 O SG CYS 38 O CYS 624 1_555 W ZN ZN . O ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc28 O SG CYS 41 O CYS 627 1_555 W ZN ZN . O ZN 907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc29 P SG CYS 21 P CYS 607 1_555 X ZN ZN . P ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? metalc ? metalc30 P SG CYS 26 P CYS 612 1_555 X ZN ZN . P ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc31 P SG CYS 38 P CYS 624 1_555 X ZN ZN . P ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc32 P SG CYS 41 P CYS 627 1_555 X ZN ZN . P ZN 908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OJ3 _atom_sites.fract_transf_matrix[1][1] 0.023348 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000041 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015097 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 3 ZN I 1 901 901 ZN ZN . R 3 ZN J 1 902 902 ZN ZN . S 3 ZN K 1 903 903 ZN ZN . T 3 ZN L 1 904 904 ZN ZN . U 3 ZN M 1 905 905 ZN ZN . V 3 ZN N 1 906 906 ZN ZN . W 3 ZN O 1 907 907 ZN ZN . X 3 ZN P 1 908 908 ZN ZN . Y 4 HOH A 1 77 1 HOH HOH . Y 4 HOH A 2 78 2 HOH HOH . Y 4 HOH A 3 79 4 HOH HOH . Y 4 HOH A 4 80 24 HOH HOH . Y 4 HOH A 5 81 33 HOH HOH . Y 4 HOH A 6 82 67 HOH HOH . Y 4 HOH A 7 83 70 HOH HOH . Y 4 HOH A 8 92 92 HOH HOH . Y 4 HOH A 9 94 94 HOH HOH . Y 4 HOH A 10 100 100 HOH HOH . Y 4 HOH A 11 101 101 HOH HOH . Y 4 HOH A 12 107 107 HOH HOH . Z 4 HOH B 1 77 5 HOH HOH . Z 4 HOH B 2 78 6 HOH HOH . Z 4 HOH B 3 79 31 HOH HOH . Z 4 HOH B 4 80 52 HOH HOH . Z 4 HOH B 5 81 63 HOH HOH . Z 4 HOH B 6 82 75 HOH HOH . Z 4 HOH B 7 86 86 HOH HOH . Z 4 HOH B 8 105 105 HOH HOH . Z 4 HOH B 9 106 106 HOH HOH . Z 4 HOH B 10 122 122 HOH HOH . Z 4 HOH B 11 125 125 HOH HOH . AA 4 HOH C 1 77 3 HOH HOH . AA 4 HOH C 2 78 7 HOH HOH . AA 4 HOH C 3 79 8 HOH HOH . AA 4 HOH C 4 80 80 HOH HOH . AA 4 HOH C 5 81 17 HOH HOH . AA 4 HOH C 6 82 82 HOH HOH . AA 4 HOH C 7 83 25 HOH HOH . AA 4 HOH C 8 84 26 HOH HOH . AA 4 HOH C 9 85 30 HOH HOH . AA 4 HOH C 10 86 48 HOH HOH . AA 4 HOH C 11 87 49 HOH HOH . AA 4 HOH C 12 88 51 HOH HOH . AA 4 HOH C 13 89 89 HOH HOH . AA 4 HOH C 14 90 56 HOH HOH . AA 4 HOH C 15 91 60 HOH HOH . AA 4 HOH C 16 92 76 HOH HOH . AA 4 HOH C 17 96 96 HOH HOH . AA 4 HOH C 18 124 124 HOH HOH . BA 4 HOH D 1 77 16 HOH HOH . BA 4 HOH D 2 78 27 HOH HOH . BA 4 HOH D 3 79 34 HOH HOH . BA 4 HOH D 4 80 40 HOH HOH . BA 4 HOH D 5 81 50 HOH HOH . BA 4 HOH D 6 82 55 HOH HOH . BA 4 HOH D 7 83 83 HOH HOH . CA 4 HOH E 1 77 19 HOH HOH . CA 4 HOH E 2 78 21 HOH HOH . CA 4 HOH E 3 79 43 HOH HOH . CA 4 HOH E 4 80 53 HOH HOH . CA 4 HOH E 5 81 73 HOH HOH . CA 4 HOH E 6 91 91 HOH HOH . CA 4 HOH E 7 114 114 HOH HOH . CA 4 HOH E 8 120 120 HOH HOH . CA 4 HOH E 9 127 127 HOH HOH . DA 4 HOH F 1 77 29 HOH HOH . DA 4 HOH F 2 78 78 HOH HOH . DA 4 HOH F 3 79 35 HOH HOH . DA 4 HOH F 4 80 37 HOH HOH . DA 4 HOH F 5 81 81 HOH HOH . DA 4 HOH F 6 82 54 HOH HOH . DA 4 HOH F 7 83 61 HOH HOH . DA 4 HOH F 8 84 64 HOH HOH . DA 4 HOH F 9 85 66 HOH HOH . DA 4 HOH F 10 86 72 HOH HOH . DA 4 HOH F 11 87 87 HOH HOH . DA 4 HOH F 12 110 110 HOH HOH . DA 4 HOH F 13 115 115 HOH HOH . DA 4 HOH F 14 118 118 HOH HOH . DA 4 HOH F 15 123 123 HOH HOH . EA 4 HOH G 1 77 9 HOH HOH . EA 4 HOH G 2 78 10 HOH HOH . EA 4 HOH G 3 79 23 HOH HOH . EA 4 HOH G 4 80 38 HOH HOH . EA 4 HOH G 5 81 41 HOH HOH . EA 4 HOH G 6 82 58 HOH HOH . EA 4 HOH G 7 84 84 HOH HOH . EA 4 HOH G 8 88 88 HOH HOH . EA 4 HOH G 9 109 109 HOH HOH . EA 4 HOH G 10 111 111 HOH HOH . EA 4 HOH G 11 112 112 HOH HOH . EA 4 HOH G 12 117 117 HOH HOH . FA 4 HOH H 1 77 32 HOH HOH . FA 4 HOH H 2 78 39 HOH HOH . FA 4 HOH H 3 79 42 HOH HOH . FA 4 HOH H 4 80 59 HOH HOH . FA 4 HOH H 5 104 104 HOH HOH . FA 4 HOH H 6 116 116 HOH HOH . FA 4 HOH H 7 121 121 HOH HOH . GA 4 HOH I 1 12 12 HOH HOH . GA 4 HOH I 2 20 20 HOH HOH . GA 4 HOH I 3 85 85 HOH HOH . GA 4 HOH I 4 98 98 HOH HOH . HA 4 HOH J 1 13 13 HOH HOH . HA 4 HOH J 2 74 74 HOH HOH . HA 4 HOH J 3 77 77 HOH HOH . IA 4 HOH K 1 14 14 HOH HOH . IA 4 HOH K 2 57 57 HOH HOH . IA 4 HOH K 3 65 65 HOH HOH . JA 4 HOH L 1 45 45 HOH HOH . JA 4 HOH L 2 90 90 HOH HOH . KA 4 HOH M 1 22 22 HOH HOH . KA 4 HOH M 2 44 44 HOH HOH . KA 4 HOH M 3 47 47 HOH HOH . KA 4 HOH M 4 69 69 HOH HOH . LA 4 HOH N 1 15 15 HOH HOH . LA 4 HOH N 2 18 18 HOH HOH . LA 4 HOH N 3 62 62 HOH HOH . LA 4 HOH N 4 93 93 HOH HOH . MA 4 HOH O 1 28 28 HOH HOH . MA 4 HOH O 2 68 68 HOH HOH . MA 4 HOH O 3 71 71 HOH HOH . MA 4 HOH O 4 79 79 HOH HOH . MA 4 HOH O 5 113 113 HOH HOH . MA 4 HOH O 6 126 126 HOH HOH . NA 4 HOH P 1 36 36 HOH HOH . NA 4 HOH P 2 46 46 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id U _atom_site.label_entity_id 3 _atom_site.Cartn_x -25.927 _atom_site.Cartn_y -9.899 _atom_site.Cartn_z 12.12 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 50.25 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 905 _atom_site.auth_asym_id M _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 1 #