data_3OKE # _model_server_result.job_id ezVenvaJxW2Osbr0sp0O1g _model_server_result.datetime_utc '2024-10-12 12:23:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3oke # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":215}' # _entry.id 3OKE # _exptl.entry_id 3OKE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OKE _cell.length_a 44.959 _cell.length_b 81.245 _cell.length_c 127.71 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OKE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 23 A CYS 23 1_555 A SG CYS 94 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 A SG CYS 139 A CYS 134 1_555 A SG CYS 199 A CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 B SG CYS 22 B CYS 22 1_555 B SG CYS 98 B CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? disulf ? disulf4 B SG CYS 149 B CYS 140 1_555 B SG CYS 204 B CYS 195 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc1 B OE2 GLU 61 B GLU 58 1_555 D ZN ZN . B ZN 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3OKE _atom_sites.fract_transf_matrix[1][1] 0.022242 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00783 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 KO2 B 1 214 212 KO2 KO2 . D 4 ZN B 1 215 1 ZN ZN . E 5 HOH A 1 215 1 HOH HOH . E 5 HOH A 2 216 2 HOH HOH . E 5 HOH A 3 217 4 HOH HOH . E 5 HOH A 4 218 7 HOH HOH . E 5 HOH A 5 219 17 HOH HOH . E 5 HOH A 6 220 24 HOH HOH . E 5 HOH A 7 221 25 HOH HOH . E 5 HOH A 8 222 26 HOH HOH . E 5 HOH A 9 223 27 HOH HOH . E 5 HOH A 10 224 33 HOH HOH . E 5 HOH A 11 225 34 HOH HOH . E 5 HOH A 12 226 38 HOH HOH . E 5 HOH A 13 227 43 HOH HOH . E 5 HOH A 14 228 44 HOH HOH . E 5 HOH A 15 229 45 HOH HOH . E 5 HOH A 16 230 46 HOH HOH . E 5 HOH A 17 231 47 HOH HOH . E 5 HOH A 18 232 48 HOH HOH . E 5 HOH A 19 233 50 HOH HOH . E 5 HOH A 20 234 51 HOH HOH . E 5 HOH A 21 235 53 HOH HOH . E 5 HOH A 22 236 54 HOH HOH . E 5 HOH A 23 237 57 HOH HOH . E 5 HOH A 24 238 58 HOH HOH . E 5 HOH A 25 239 62 HOH HOH . E 5 HOH A 26 240 65 HOH HOH . E 5 HOH A 27 241 67 HOH HOH . E 5 HOH A 28 242 68 HOH HOH . E 5 HOH A 29 243 69 HOH HOH . E 5 HOH A 30 244 71 HOH HOH . E 5 HOH A 31 245 72 HOH HOH . E 5 HOH A 32 246 73 HOH HOH . E 5 HOH A 33 247 74 HOH HOH . E 5 HOH A 34 248 76 HOH HOH . E 5 HOH A 35 249 79 HOH HOH . E 5 HOH A 36 250 81 HOH HOH . E 5 HOH A 37 251 85 HOH HOH . E 5 HOH A 38 252 87 HOH HOH . E 5 HOH A 39 253 88 HOH HOH . E 5 HOH A 40 254 89 HOH HOH . E 5 HOH A 41 255 90 HOH HOH . E 5 HOH A 42 256 93 HOH HOH . E 5 HOH A 43 257 94 HOH HOH . E 5 HOH A 44 258 96 HOH HOH . E 5 HOH A 45 259 97 HOH HOH . E 5 HOH A 46 260 98 HOH HOH . E 5 HOH A 47 261 99 HOH HOH . F 5 HOH B 1 216 3 HOH HOH . F 5 HOH B 2 217 5 HOH HOH . F 5 HOH B 3 218 6 HOH HOH . F 5 HOH B 4 219 8 HOH HOH . F 5 HOH B 5 220 9 HOH HOH . F 5 HOH B 6 221 10 HOH HOH . F 5 HOH B 7 222 11 HOH HOH . F 5 HOH B 8 223 12 HOH HOH . F 5 HOH B 9 224 13 HOH HOH . F 5 HOH B 10 225 14 HOH HOH . F 5 HOH B 11 226 15 HOH HOH . F 5 HOH B 12 227 16 HOH HOH . F 5 HOH B 13 228 18 HOH HOH . F 5 HOH B 14 229 19 HOH HOH . F 5 HOH B 15 230 20 HOH HOH . F 5 HOH B 16 231 21 HOH HOH . F 5 HOH B 17 232 22 HOH HOH . F 5 HOH B 18 233 23 HOH HOH . F 5 HOH B 19 234 28 HOH HOH . F 5 HOH B 20 235 29 HOH HOH . F 5 HOH B 21 236 30 HOH HOH . F 5 HOH B 22 237 31 HOH HOH . F 5 HOH B 23 238 32 HOH HOH . F 5 HOH B 24 239 35 HOH HOH . F 5 HOH B 25 240 36 HOH HOH . F 5 HOH B 26 241 37 HOH HOH . F 5 HOH B 27 242 39 HOH HOH . F 5 HOH B 28 243 40 HOH HOH . F 5 HOH B 29 244 41 HOH HOH . F 5 HOH B 30 245 42 HOH HOH . F 5 HOH B 31 246 49 HOH HOH . F 5 HOH B 32 247 52 HOH HOH . F 5 HOH B 33 248 55 HOH HOH . F 5 HOH B 34 249 56 HOH HOH . F 5 HOH B 35 250 59 HOH HOH . F 5 HOH B 36 251 60 HOH HOH . F 5 HOH B 37 252 61 HOH HOH . F 5 HOH B 38 253 63 HOH HOH . F 5 HOH B 39 254 64 HOH HOH . F 5 HOH B 40 255 66 HOH HOH . F 5 HOH B 41 256 70 HOH HOH . F 5 HOH B 42 257 75 HOH HOH . F 5 HOH B 43 258 77 HOH HOH . F 5 HOH B 44 259 78 HOH HOH . F 5 HOH B 45 260 80 HOH HOH . F 5 HOH B 46 261 82 HOH HOH . F 5 HOH B 47 262 83 HOH HOH . F 5 HOH B 48 263 84 HOH HOH . F 5 HOH B 49 264 86 HOH HOH . F 5 HOH B 50 265 91 HOH HOH . F 5 HOH B 51 266 92 HOH HOH . F 5 HOH B 52 267 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -19.027 _atom_site.Cartn_y -1.979 _atom_site.Cartn_z -0.948 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 56.69 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 215 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #