data_3OMS
#
_model_server_result.job_id            A1qg2k0v4zd22v3kSHgU7w 
_model_server_result.datetime_utc      '2025-02-05 11:38:43' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3oms 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    3OMS 
#
_exptl.entry_id    3OMS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OMS 
_cell.length_a            62.302 
_cell.length_b            62.302 
_cell.length_c            90.654 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OMS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 7_556 y,x,-z+1 0 1 0 1 0 0 0 0 -1 0 0 90.654 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LEU 15 A LEU 12 1_555 A N MSE 16 A MSE 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? 
covale ? covale2 A C MSE 16 A MSE 13 1_555 A N PHE 17 A PHE 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
covale ? covale3 A C ALA 24 A ALA 21 1_555 A N MSE 25 A MSE 22 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? 
covale ? covale4 A C MSE 25 A MSE 22 1_555 A N ASN 26 A ASN 23 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale5 A C PHE 66 A PHE 63 1_555 A N MSE 67 A MSE 64 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? 
covale ? covale6 A C MSE 67 A MSE 64 1_555 A N CYS 68 A CYS 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? 
covale ? covale7 A C ALA 82 A ALA 79 1_555 A N MSE 83 A MSE 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? 
covale ? covale8 A C MSE 83 A MSE 80 1_555 A N SER 84 A SER 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? 
covale ? covale9 A C LEU 109 A LEU 106 1_555 A N MSE 110 A MSE 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? 
covale ? covale10 A C MSE 110 A MSE 107 1_555 A N PRO 111 A PRO 108 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3OMS 
_atom_sites.fract_transf_matrix[1][1]    0.016051 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016051 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011031 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 501 501 EDO EDO . 
C 2 EDO A 1 502 502 EDO EDO . 
D 3 HOH A 1 136 1 HOH HOH . 
D 3 HOH A 2 137 2 HOH HOH . 
D 3 HOH A 3 138 3 HOH HOH . 
D 3 HOH A 4 139 4 HOH HOH . 
D 3 HOH A 5 140 5 HOH HOH . 
D 3 HOH A 6 141 6 HOH HOH . 
D 3 HOH A 7 142 7 HOH HOH . 
D 3 HOH A 8 143 8 HOH HOH . 
D 3 HOH A 9 144 9 HOH HOH . 
D 3 HOH A 10 145 10 HOH HOH . 
D 3 HOH A 11 146 11 HOH HOH . 
D 3 HOH A 12 147 12 HOH HOH . 
D 3 HOH A 13 148 13 HOH HOH . 
D 3 HOH A 14 149 14 HOH HOH . 
D 3 HOH A 15 150 15 HOH HOH . 
D 3 HOH A 16 151 16 HOH HOH . 
D 3 HOH A 17 152 17 HOH HOH . 
D 3 HOH A 18 153 18 HOH HOH . 
D 3 HOH A 19 154 19 HOH HOH . 
D 3 HOH A 20 155 20 HOH HOH . 
D 3 HOH A 21 156 21 HOH HOH . 
D 3 HOH A 22 157 22 HOH HOH . 
D 3 HOH A 23 158 23 HOH HOH . 
D 3 HOH A 24 159 24 HOH HOH . 
D 3 HOH A 25 160 25 HOH HOH . 
D 3 HOH A 26 161 26 HOH HOH . 
D 3 HOH A 27 162 27 HOH HOH . 
D 3 HOH A 28 163 28 HOH HOH . 
D 3 HOH A 29 164 29 HOH HOH . 
D 3 HOH A 30 165 30 HOH HOH . 
D 3 HOH A 31 166 31 HOH HOH . 
D 3 HOH A 32 167 32 HOH HOH . 
D 3 HOH A 33 168 33 HOH HOH . 
D 3 HOH A 34 169 34 HOH HOH . 
D 3 HOH A 35 170 35 HOH HOH . 
D 3 HOH A 36 171 36 HOH HOH . 
D 3 HOH A 37 172 37 HOH HOH . 
D 3 HOH A 38 173 38 HOH HOH . 
D 3 HOH A 39 174 39 HOH HOH . 
D 3 HOH A 40 175 40 HOH HOH . 
D 3 HOH A 41 176 41 HOH HOH . 
D 3 HOH A 42 177 42 HOH HOH . 
D 3 HOH A 43 178 43 HOH HOH . 
D 3 HOH A 44 179 44 HOH HOH . 
D 3 HOH A 45 180 45 HOH HOH . 
D 3 HOH A 46 181 46 HOH HOH . 
D 3 HOH A 47 182 47 HOH HOH . 
D 3 HOH A 48 183 48 HOH HOH . 
D 3 HOH A 49 184 49 HOH HOH . 
D 3 HOH A 50 185 50 HOH HOH . 
D 3 HOH A 51 186 51 HOH HOH . 
D 3 HOH A 52 187 52 HOH HOH . 
D 3 HOH A 53 188 53 HOH HOH . 
D 3 HOH A 54 189 54 HOH HOH . 
D 3 HOH A 55 190 55 HOH HOH . 
D 3 HOH A 56 191 56 HOH HOH . 
D 3 HOH A 57 192 57 HOH HOH . 
D 3 HOH A 58 193 58 HOH HOH . 
D 3 HOH A 59 194 59 HOH HOH . 
D 3 HOH A 60 195 60 HOH HOH . 
D 3 HOH A 61 196 61 HOH HOH . 
D 3 HOH A 62 197 62 HOH HOH . 
D 3 HOH A 63 198 63 HOH HOH . 
D 3 HOH A 64 199 64 HOH HOH . 
D 3 HOH A 65 200 65 HOH HOH . 
D 3 HOH A 66 201 66 HOH HOH . 
D 3 HOH A 67 202 67 HOH HOH . 
D 3 HOH A 68 203 68 HOH HOH . 
D 3 HOH A 69 204 69 HOH HOH . 
D 3 HOH A 70 205 70 HOH HOH . 
D 3 HOH A 71 206 71 HOH HOH . 
D 3 HOH A 72 207 72 HOH HOH . 
D 3 HOH A 73 208 73 HOH HOH . 
D 3 HOH A 74 209 74 HOH HOH . 
D 3 HOH A 75 210 75 HOH HOH . 
D 3 HOH A 76 211 76 HOH HOH . 
D 3 HOH A 77 212 77 HOH HOH . 
D 3 HOH A 78 213 78 HOH HOH . 
D 3 HOH A 79 214 79 HOH HOH . 
D 3 HOH A 80 215 80 HOH HOH . 
D 3 HOH A 81 216 81 HOH HOH . 
D 3 HOH A 82 217 82 HOH HOH . 
D 3 HOH A 83 218 83 HOH HOH . 
D 3 HOH A 84 219 84 HOH HOH . 
D 3 HOH A 85 220 85 HOH HOH . 
D 3 HOH A 86 221 86 HOH HOH . 
D 3 HOH A 87 222 87 HOH HOH . 
D 3 HOH A 88 223 88 HOH HOH . 
D 3 HOH A 89 224 89 HOH HOH . 
D 3 HOH A 90 225 90 HOH HOH . 
D 3 HOH A 91 226 91 HOH HOH . 
D 3 HOH A 92 227 92 HOH HOH . 
D 3 HOH A 93 228 93 HOH HOH . 
D 3 HOH A 94 229 94 HOH HOH . 
D 3 HOH A 95 230 95 HOH HOH . 
D 3 HOH A 96 231 96 HOH HOH . 
D 3 HOH A 97 232 97 HOH HOH . 
D 3 HOH A 98 233 98 HOH HOH . 
D 3 HOH A 99 234 99 HOH HOH . 
D 3 HOH A 100 235 100 HOH HOH . 
D 3 HOH A 101 236 101 HOH HOH . 
D 3 HOH A 102 237 102 HOH HOH . 
D 3 HOH A 103 238 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 2 7.546 24.452 31.057 1 58.02 ? C1 EDO 502 A 1 
HETATM 2 O O1 EDO . . . C 2 7.953 25.817 31.215 1 59.23 ? O1 EDO 502 A 1 
HETATM 3 C C2 EDO . . . C 2 7.528 24.099 29.576 1 58.22 ? C2 EDO 502 A 1 
HETATM 4 O O2 EDO . . . C 2 8.835 23.671 29.167 1 58.41 ? O2 EDO 502 A 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#