data_3OMU # _model_server_result.job_id 5zwqW5duUTKexh1kkzO_eA _model_server_result.datetime_utc '2024-11-22 18:45:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3omu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":215}' # _entry.id 3OMU # _exptl.entry_id 3OMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 482.427 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-amino-4-{2,4-dichloro-5-[2-(diethylamino)ethoxy]phenyl}-N-ethylthieno[2,3-d]pyrimidine-6-carboxamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3OMU _cell.length_a 60.044 _cell.length_b 60.941 _cell.length_c 126.996 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3OMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 181 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 164 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 181 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 164 _struct_conn.ptnr2_symmetry 1_455 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.941 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H25 Cl2 N5 O2 S' _chem_comp.formula_weight 482.427 _chem_comp.id IBD _chem_comp.mon_nstd_flag . _chem_comp.name 2-amino-4-{2,4-dichloro-5-[2-(diethylamino)ethoxy]phenyl}-N-ethylthieno[2,3-d]pyrimidine-6-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IBD doub 152 n y N1 C6 IBD sing 153 n y C2 N3 IBD sing 154 n y C2 NAD IBD sing 155 n n N3 C4 IBD doub 156 n y C4 C5 IBD sing 157 n y C4 SAT IBD sing 158 n y C5 C6 IBD doub 159 n y C5 CAJ IBD sing 160 n y C6 CBA IBD sing 161 n y CAA CAK IBD sing 162 n n CAB CAL IBD sing 163 n n CAC CAM IBD sing 164 n n OAE CAU IBD doub 165 n n CLAF CAW IBD sing 166 n n CLAG CAX IBD sing 167 n n CAH CAW IBD doub 168 n y CAH CAX IBD sing 169 n y CAI CAY IBD doub 170 n y CAI CBA IBD sing 171 n y CAJ CAZ IBD doub 172 n y CAK NAR IBD sing 173 n n CAL NBE IBD sing 174 n n CAM NBE IBD sing 175 n n CAN CAO IBD sing 176 n n CAN OAS IBD sing 177 n n CAO NBE IBD sing 178 n n NAR CAU IBD sing 179 n n OAS CAY IBD sing 180 n n SAT CAZ IBD sing 181 n y CAU CAZ IBD sing 182 n n CAW CAY IBD sing 183 n y CAX CBA IBD doub 184 n y CAA HAA IBD sing 185 n n CAA HAAA IBD sing 186 n n CAA HAAB IBD sing 187 n n CAB HAB IBD sing 188 n n CAB HABA IBD sing 189 n n CAB HABB IBD sing 190 n n CAC HAC IBD sing 191 n n CAC HACA IBD sing 192 n n CAC HACB IBD sing 193 n n NAD HNAD IBD sing 194 n n NAD HNAA IBD sing 195 n n CAH HAH IBD sing 196 n n CAI HAI IBD sing 197 n n CAJ HAJ IBD sing 198 n n CAK HAK IBD sing 199 n n CAK HAKA IBD sing 200 n n CAL HAL IBD sing 201 n n CAL HALA IBD sing 202 n n CAM HAM IBD sing 203 n n CAM HAMA IBD sing 204 n n CAN HAN IBD sing 205 n n CAN HANA IBD sing 206 n n CAO HAO IBD sing 207 n n CAO HAOA IBD sing 208 n n NAR HNAR IBD sing 209 n n # _atom_sites.entry_id 3OMU _atom_sites.fract_transf_matrix[1][1] 0.016654 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016409 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007874 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IBD A 1 215 2 IBD IBD . D 2 IBD B 1 215 1 IBD IBD . E 3 HOH A 1 216 5 HOH HOH . E 3 HOH A 2 217 9 HOH HOH . E 3 HOH A 3 218 10 HOH HOH . E 3 HOH A 4 219 11 HOH HOH . E 3 HOH A 5 220 12 HOH HOH . E 3 HOH A 6 221 13 HOH HOH . E 3 HOH A 7 222 14 HOH HOH . E 3 HOH A 8 223 15 HOH HOH . E 3 HOH A 9 224 16 HOH HOH . E 3 HOH A 10 225 17 HOH HOH . E 3 HOH A 11 226 18 HOH HOH . E 3 HOH A 12 227 19 HOH HOH . E 3 HOH A 13 228 23 HOH HOH . E 3 HOH A 14 229 26 HOH HOH . E 3 HOH A 15 230 27 HOH HOH . E 3 HOH A 16 231 28 HOH HOH . E 3 HOH A 17 232 30 HOH HOH . E 3 HOH A 18 233 32 HOH HOH . E 3 HOH A 19 234 33 HOH HOH . E 3 HOH A 20 235 34 HOH HOH . E 3 HOH A 21 236 36 HOH HOH . E 3 HOH A 22 237 37 HOH HOH . E 3 HOH A 23 238 39 HOH HOH . E 3 HOH A 24 239 44 HOH HOH . E 3 HOH A 25 240 46 HOH HOH . E 3 HOH A 26 241 47 HOH HOH . E 3 HOH A 27 242 49 HOH HOH . E 3 HOH A 28 243 52 HOH HOH . E 3 HOH A 29 244 53 HOH HOH . E 3 HOH A 30 245 54 HOH HOH . E 3 HOH A 31 246 56 HOH HOH . E 3 HOH A 32 247 57 HOH HOH . E 3 HOH A 33 248 61 HOH HOH . E 3 HOH A 34 249 66 HOH HOH . E 3 HOH A 35 250 68 HOH HOH . E 3 HOH A 36 251 69 HOH HOH . E 3 HOH A 37 252 70 HOH HOH . E 3 HOH A 38 253 71 HOH HOH . E 3 HOH A 39 254 75 HOH HOH . E 3 HOH A 40 255 76 HOH HOH . E 3 HOH A 41 256 80 HOH HOH . E 3 HOH A 42 257 82 HOH HOH . E 3 HOH A 43 258 83 HOH HOH . E 3 HOH A 44 259 84 HOH HOH . E 3 HOH A 45 260 85 HOH HOH . E 3 HOH A 46 261 89 HOH HOH . E 3 HOH A 47 262 100 HOH HOH . E 3 HOH A 48 263 103 HOH HOH . E 3 HOH A 49 264 104 HOH HOH . E 3 HOH A 50 265 105 HOH HOH . E 3 HOH A 51 266 106 HOH HOH . E 3 HOH A 52 267 107 HOH HOH . E 3 HOH A 53 268 108 HOH HOH . E 3 HOH A 54 269 109 HOH HOH . E 3 HOH A 55 270 110 HOH HOH . E 3 HOH A 56 271 120 HOH HOH . E 3 HOH A 57 272 124 HOH HOH . F 3 HOH B 1 216 2 HOH HOH . F 3 HOH B 2 217 7 HOH HOH . F 3 HOH B 3 218 8 HOH HOH . F 3 HOH B 4 219 21 HOH HOH . F 3 HOH B 5 220 24 HOH HOH . F 3 HOH B 6 221 29 HOH HOH . F 3 HOH B 7 222 31 HOH HOH . F 3 HOH B 8 223 38 HOH HOH . F 3 HOH B 9 224 40 HOH HOH . F 3 HOH B 10 225 41 HOH HOH . F 3 HOH B 11 226 50 HOH HOH . F 3 HOH B 12 227 51 HOH HOH . F 3 HOH B 13 228 55 HOH HOH . F 3 HOH B 14 229 58 HOH HOH . F 3 HOH B 15 230 60 HOH HOH . F 3 HOH B 16 231 67 HOH HOH . F 3 HOH B 17 232 73 HOH HOH . F 3 HOH B 18 233 74 HOH HOH . F 3 HOH B 19 234 77 HOH HOH . F 3 HOH B 20 235 78 HOH HOH . F 3 HOH B 21 236 79 HOH HOH . F 3 HOH B 22 237 81 HOH HOH . F 3 HOH B 23 238 88 HOH HOH . F 3 HOH B 24 239 90 HOH HOH . F 3 HOH B 25 240 91 HOH HOH . F 3 HOH B 26 241 92 HOH HOH . F 3 HOH B 27 242 98 HOH HOH . F 3 HOH B 28 243 111 HOH HOH . F 3 HOH B 29 244 112 HOH HOH . F 3 HOH B 30 245 113 HOH HOH . F 3 HOH B 31 246 114 HOH HOH . F 3 HOH B 32 247 115 HOH HOH . F 3 HOH B 33 248 116 HOH HOH . F 3 HOH B 34 249 117 HOH HOH . F 3 HOH B 35 250 118 HOH HOH . F 3 HOH B 36 251 119 HOH HOH . F 3 HOH B 37 252 121 HOH HOH . F 3 HOH B 38 253 122 HOH HOH . F 3 HOH B 39 254 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IBD . . . C 2 0.029 -0.786 12.916 1 30.57 ? N1 IBD 215 A 1 HETATM 2 C C2 IBD . . . C 2 -0.668 -1.181 13.996 1 30.6 ? C2 IBD 215 A 1 HETATM 3 N N3 IBD . . . C 2 -1.104 -0.287 14.909 1 32.32 ? N3 IBD 215 A 1 HETATM 4 C C4 IBD . . . C 2 -0.842 1.019 14.776 1 31.78 ? C4 IBD 215 A 1 HETATM 5 C C5 IBD . . . C 2 -0.107 1.477 13.65 1 31.52 ? C5 IBD 215 A 1 HETATM 6 C C6 IBD . . . C 2 0.333 0.511 12.703 1 31.03 ? C6 IBD 215 A 1 HETATM 7 C CAA IBD . . . C 2 -1.6 7.158 17.613 1 35.8 ? CAA IBD 215 A 1 HETATM 8 C CAB IBD . . . C 2 4.839 5.501 8.943 1 42.42 ? CAB IBD 215 A 1 HETATM 9 C CAC IBD . . . C 2 7.297 6.599 11.864 1 45.31 ? CAC IBD 215 A 1 HETATM 10 N NAD IBD . . . C 2 -0.95 -2.46 14.177 1 30.12 ? NAD IBD 215 A 1 HETATM 11 O OAE IBD . . . C 2 0.472 5.663 14.473 1 34.89 ? OAE IBD 215 A 1 HETATM 12 CL CLAF IBD . . . C 2 3.124 2.125 7.653 1 37.94 ? CLAF IBD 215 A 1 HETATM 13 CL CLAG IBD . . . C 2 -1.048 -0.136 10.063 1 29.35 ? CLAG IBD 215 A 1 HETATM 14 C CAH IBD . . . C 2 1.119 1.029 9.087 1 32.73 ? CAH IBD 215 A 1 HETATM 15 C CAI IBD . . . C 2 2.295 1.54 11.564 1 31.32 ? CAI IBD 215 A 1 HETATM 16 C CAJ IBD . . . C 2 0.059 2.824 13.684 1 31.97 ? CAJ IBD 215 A 1 HETATM 17 C CAK IBD . . . C 2 -1.363 6.942 16.119 1 34.68 ? CAK IBD 215 A 1 HETATM 18 C CAL IBD . . . C 2 6.033 5.344 9.886 1 42.33 ? CAL IBD 215 A 1 HETATM 19 C CAM IBD . . . C 2 6.034 5.836 12.294 1 43.48 ? CAM IBD 215 A 1 HETATM 20 C CAN IBD . . . C 2 4.742 2.674 11.655 1 36 ? CAN IBD 215 A 1 HETATM 21 C CAO IBD . . . C 2 5.998 3.534 11.519 1 37.88 ? CAO IBD 215 A 1 HETATM 22 N NAR IBD . . . C 2 -1.345 5.5 15.822 1 33.75 ? NAR IBD 215 A 1 HETATM 23 O OAS IBD . . . C 2 4.132 2.548 10.355 1 33.35 ? OAS IBD 215 A 1 HETATM 24 S SAT IBD . . . C 2 -1.274 2.361 15.758 1 33.69 ? SAT IBD 215 A 1 HETATM 25 C CAU IBD . . . C 2 -0.42 4.988 14.998 1 34.25 ? CAU IBD 215 A 1 HETATM 26 C CAW IBD . . . C 2 2.344 1.666 9.135 1 33.06 ? CAW IBD 215 A 1 HETATM 27 C CAX IBD . . . C 2 0.478 0.649 10.267 1 31.23 ? CAX IBD 215 A 1 HETATM 28 C CAY IBD . . . C 2 2.929 1.925 10.369 1 33 ? CAY IBD 215 A 1 HETATM 29 C CAZ IBD . . . C 2 -0.485 3.465 14.75 1 33.49 ? CAZ IBD 215 A 1 HETATM 30 C CBA IBD . . . C 2 1.047 0.885 11.532 1 31.74 ? CBA IBD 215 A 1 HETATM 31 N NBE IBD . . . C 2 5.584 4.92 11.222 1 41.39 ? NBE IBD 215 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 31 #