data_3OMU
#
_model_server_result.job_id            R87jku61PONFlApZIT1drQ 
_model_server_result.datetime_utc      '2024-11-13 03:52:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3omu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":215}' 
#
_entry.id    3OMU 
#
_exptl.entry_id    3OMU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              482.427 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-amino-4-{2,4-dichloro-5-[2-(diethylamino)ethoxy]phenyl}-N-ethylthieno[2,3-d]pyrimidine-6-carboxamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3OMU 
_cell.length_a            60.044 
_cell.length_b            60.941 
_cell.length_c            126.996 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3OMU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 software_defined_assembly 1 
PISA monomeric 1 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             181 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              164 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            B 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             181 
_struct_conn.ptnr2_auth_asym_id             B 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              164 
_struct_conn.ptnr2_symmetry                 1_455 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.941 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C21 H25 Cl2 N5 O2 S' 
_chem_comp.formula_weight    482.427 
_chem_comp.id                IBD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-amino-4-{2,4-dichloro-5-[2-(diethylamino)ethoxy]phenyl}-N-ethylthieno[2,3-d]pyrimidine-6-carboxamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 IBD doub 152 n y 
N1 C6 IBD sing 153 n y 
C2 N3 IBD sing 154 n y 
C2 NAD IBD sing 155 n n 
N3 C4 IBD doub 156 n y 
C4 C5 IBD sing 157 n y 
C4 SAT IBD sing 158 n y 
C5 C6 IBD doub 159 n y 
C5 CAJ IBD sing 160 n y 
C6 CBA IBD sing 161 n y 
CAA CAK IBD sing 162 n n 
CAB CAL IBD sing 163 n n 
CAC CAM IBD sing 164 n n 
OAE CAU IBD doub 165 n n 
CLAF CAW IBD sing 166 n n 
CLAG CAX IBD sing 167 n n 
CAH CAW IBD doub 168 n y 
CAH CAX IBD sing 169 n y 
CAI CAY IBD doub 170 n y 
CAI CBA IBD sing 171 n y 
CAJ CAZ IBD doub 172 n y 
CAK NAR IBD sing 173 n n 
CAL NBE IBD sing 174 n n 
CAM NBE IBD sing 175 n n 
CAN CAO IBD sing 176 n n 
CAN OAS IBD sing 177 n n 
CAO NBE IBD sing 178 n n 
NAR CAU IBD sing 179 n n 
OAS CAY IBD sing 180 n n 
SAT CAZ IBD sing 181 n y 
CAU CAZ IBD sing 182 n n 
CAW CAY IBD sing 183 n y 
CAX CBA IBD doub 184 n y 
CAA HAA IBD sing 185 n n 
CAA HAAA IBD sing 186 n n 
CAA HAAB IBD sing 187 n n 
CAB HAB IBD sing 188 n n 
CAB HABA IBD sing 189 n n 
CAB HABB IBD sing 190 n n 
CAC HAC IBD sing 191 n n 
CAC HACA IBD sing 192 n n 
CAC HACB IBD sing 193 n n 
NAD HNAD IBD sing 194 n n 
NAD HNAA IBD sing 195 n n 
CAH HAH IBD sing 196 n n 
CAI HAI IBD sing 197 n n 
CAJ HAJ IBD sing 198 n n 
CAK HAK IBD sing 199 n n 
CAK HAKA IBD sing 200 n n 
CAL HAL IBD sing 201 n n 
CAL HALA IBD sing 202 n n 
CAM HAM IBD sing 203 n n 
CAM HAMA IBD sing 204 n n 
CAN HAN IBD sing 205 n n 
CAN HANA IBD sing 206 n n 
CAO HAO IBD sing 207 n n 
CAO HAOA IBD sing 208 n n 
NAR HNAR IBD sing 209 n n 
#
_atom_sites.entry_id                     3OMU 
_atom_sites.fract_transf_matrix[1][1]    0.016654 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016409 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007874 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 IBD A 1 215 2 IBD IBD . 
D 2 IBD B 1 215 1 IBD IBD . 
E 3 HOH A 1 216 5 HOH HOH . 
E 3 HOH A 2 217 9 HOH HOH . 
E 3 HOH A 3 218 10 HOH HOH . 
E 3 HOH A 4 219 11 HOH HOH . 
E 3 HOH A 5 220 12 HOH HOH . 
E 3 HOH A 6 221 13 HOH HOH . 
E 3 HOH A 7 222 14 HOH HOH . 
E 3 HOH A 8 223 15 HOH HOH . 
E 3 HOH A 9 224 16 HOH HOH . 
E 3 HOH A 10 225 17 HOH HOH . 
E 3 HOH A 11 226 18 HOH HOH . 
E 3 HOH A 12 227 19 HOH HOH . 
E 3 HOH A 13 228 23 HOH HOH . 
E 3 HOH A 14 229 26 HOH HOH . 
E 3 HOH A 15 230 27 HOH HOH . 
E 3 HOH A 16 231 28 HOH HOH . 
E 3 HOH A 17 232 30 HOH HOH . 
E 3 HOH A 18 233 32 HOH HOH . 
E 3 HOH A 19 234 33 HOH HOH . 
E 3 HOH A 20 235 34 HOH HOH . 
E 3 HOH A 21 236 36 HOH HOH . 
E 3 HOH A 22 237 37 HOH HOH . 
E 3 HOH A 23 238 39 HOH HOH . 
E 3 HOH A 24 239 44 HOH HOH . 
E 3 HOH A 25 240 46 HOH HOH . 
E 3 HOH A 26 241 47 HOH HOH . 
E 3 HOH A 27 242 49 HOH HOH . 
E 3 HOH A 28 243 52 HOH HOH . 
E 3 HOH A 29 244 53 HOH HOH . 
E 3 HOH A 30 245 54 HOH HOH . 
E 3 HOH A 31 246 56 HOH HOH . 
E 3 HOH A 32 247 57 HOH HOH . 
E 3 HOH A 33 248 61 HOH HOH . 
E 3 HOH A 34 249 66 HOH HOH . 
E 3 HOH A 35 250 68 HOH HOH . 
E 3 HOH A 36 251 69 HOH HOH . 
E 3 HOH A 37 252 70 HOH HOH . 
E 3 HOH A 38 253 71 HOH HOH . 
E 3 HOH A 39 254 75 HOH HOH . 
E 3 HOH A 40 255 76 HOH HOH . 
E 3 HOH A 41 256 80 HOH HOH . 
E 3 HOH A 42 257 82 HOH HOH . 
E 3 HOH A 43 258 83 HOH HOH . 
E 3 HOH A 44 259 84 HOH HOH . 
E 3 HOH A 45 260 85 HOH HOH . 
E 3 HOH A 46 261 89 HOH HOH . 
E 3 HOH A 47 262 100 HOH HOH . 
E 3 HOH A 48 263 103 HOH HOH . 
E 3 HOH A 49 264 104 HOH HOH . 
E 3 HOH A 50 265 105 HOH HOH . 
E 3 HOH A 51 266 106 HOH HOH . 
E 3 HOH A 52 267 107 HOH HOH . 
E 3 HOH A 53 268 108 HOH HOH . 
E 3 HOH A 54 269 109 HOH HOH . 
E 3 HOH A 55 270 110 HOH HOH . 
E 3 HOH A 56 271 120 HOH HOH . 
E 3 HOH A 57 272 124 HOH HOH . 
F 3 HOH B 1 216 2 HOH HOH . 
F 3 HOH B 2 217 7 HOH HOH . 
F 3 HOH B 3 218 8 HOH HOH . 
F 3 HOH B 4 219 21 HOH HOH . 
F 3 HOH B 5 220 24 HOH HOH . 
F 3 HOH B 6 221 29 HOH HOH . 
F 3 HOH B 7 222 31 HOH HOH . 
F 3 HOH B 8 223 38 HOH HOH . 
F 3 HOH B 9 224 40 HOH HOH . 
F 3 HOH B 10 225 41 HOH HOH . 
F 3 HOH B 11 226 50 HOH HOH . 
F 3 HOH B 12 227 51 HOH HOH . 
F 3 HOH B 13 228 55 HOH HOH . 
F 3 HOH B 14 229 58 HOH HOH . 
F 3 HOH B 15 230 60 HOH HOH . 
F 3 HOH B 16 231 67 HOH HOH . 
F 3 HOH B 17 232 73 HOH HOH . 
F 3 HOH B 18 233 74 HOH HOH . 
F 3 HOH B 19 234 77 HOH HOH . 
F 3 HOH B 20 235 78 HOH HOH . 
F 3 HOH B 21 236 79 HOH HOH . 
F 3 HOH B 22 237 81 HOH HOH . 
F 3 HOH B 23 238 88 HOH HOH . 
F 3 HOH B 24 239 90 HOH HOH . 
F 3 HOH B 25 240 91 HOH HOH . 
F 3 HOH B 26 241 92 HOH HOH . 
F 3 HOH B 27 242 98 HOH HOH . 
F 3 HOH B 28 243 111 HOH HOH . 
F 3 HOH B 29 244 112 HOH HOH . 
F 3 HOH B 30 245 113 HOH HOH . 
F 3 HOH B 31 246 114 HOH HOH . 
F 3 HOH B 32 247 115 HOH HOH . 
F 3 HOH B 33 248 116 HOH HOH . 
F 3 HOH B 34 249 117 HOH HOH . 
F 3 HOH B 35 250 118 HOH HOH . 
F 3 HOH B 36 251 119 HOH HOH . 
F 3 HOH B 37 252 121 HOH HOH . 
F 3 HOH B 38 253 122 HOH HOH . 
F 3 HOH B 39 254 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 IBD . . . D 2 19.312 4.379 18.039 1 25.52 ? N1 IBD 215 B 1 
HETATM 2 C C2 IBD . . . D 2 19.998 3.342 18.554 1 24.36 ? C2 IBD 215 B 1 
HETATM 3 N N3 IBD . . . D 2 20.399 2.344 17.762 1 24.39 ? N3 IBD 215 B 1 
HETATM 4 C C4 IBD . . . D 2 20.141 2.352 16.467 1 23.55 ? C4 IBD 215 B 1 
HETATM 5 C C5 IBD . . . D 2 19.415 3.403 15.87 1 24.68 ? C5 IBD 215 B 1 
HETATM 6 C C6 IBD . . . D 2 18.997 4.448 16.72 1 25.15 ? C6 IBD 215 B 1 
HETATM 7 C CAA IBD . . . D 2 21.034 -1.173 10.76 1 27.68 ? CAA IBD 215 B 1 
HETATM 8 C CAB IBD . . . D 2 14.159 8.366 11.896 1 34.4 ? CAB IBD 215 B 1 
HETATM 9 C CAC IBD . . . D 2 12.693 4.462 10.544 1 36.57 ? CAC IBD 215 B 1 
HETATM 10 N NAD IBD . . . D 2 20.312 3.273 19.857 1 25.42 ? NAD IBD 215 B 1 
HETATM 11 O OAE IBD . . . D 2 18.86 1.999 11.816 1 30.26 ? OAE IBD 215 B 1 
HETATM 12 CL CLAF IBD . . . D 2 16.338 9.35 14.675 1 33.34 ? CLAF IBD 215 B 1 
HETATM 13 CL CLAG IBD . . . D 2 20.428 7.123 17.234 1 30.03 ? CLAG IBD 215 B 1 
HETATM 14 C CAH IBD . . . D 2 18.296 7.989 15.947 1 27.29 ? CAH IBD 215 B 1 
HETATM 15 C CAI IBD . . . D 2 17.108 5.516 15.552 1 26.23 ? CAI IBD 215 B 1 
HETATM 16 C CAJ IBD . . . D 2 19.258 3.21 14.533 1 25.59 ? CAJ IBD 215 B 1 
HETATM 17 C CAK IBD . . . D 2 20.923 0.343 10.849 1 28.05 ? CAK IBD 215 B 1 
HETATM 18 C CAL IBD . . . D 2 13.355 7.104 11.568 1 36.82 ? CAL IBD 215 B 1 
HETATM 19 C CAM IBD . . . D 2 14.031 4.754 11.22 1 36.95 ? CAM IBD 215 B 1 
HETATM 20 C CAN IBD . . . D 2 14.504 5.494 14.5 1 27.83 ? CAN IBD 215 B 1 
HETATM 21 C CAO IBD . . . D 2 13.383 5.546 13.452 1 32.05 ? CAO IBD 215 B 1 
HETATM 22 N NAR IBD . . . D 2 20.762 0.815 12.237 1 27.97 ? NAR IBD 215 B 1 
HETATM 23 O OAS IBD . . . D 2 15.327 6.691 14.393 1 25.42 ? OAS IBD 215 B 1 
HETATM 24 S SAT IBD . . . D 2 20.548 1.238 15.306 1 24.68 ? SAT IBD 215 B 1 
HETATM 25 C CAU IBD . . . D 2 19.754 1.615 12.59 1 27.58 ? CAU IBD 215 B 1 
HETATM 26 C CAW IBD . . . D 2 17.092 7.913 15.272 1 27.79 ? CAW IBD 215 B 1 
HETATM 27 C CAX IBD . . . D 2 18.917 6.847 16.421 1 25.77 ? CAX IBD 215 B 1 
HETATM 28 C CAY IBD . . . D 2 16.499 6.683 15.064 1 26.41 ? CAY IBD 215 B 1 
HETATM 29 C CAZ IBD . . . D 2 19.776 2.058 14.058 1 25.85 ? CAZ IBD 215 B 1 
HETATM 30 C CBA IBD . . . D 2 18.325 5.583 16.24 1 25.11 ? CBA IBD 215 B 1 
HETATM 31 N NBE IBD . . . D 2 13.969 5.901 12.147 1 35.31 ? NBE IBD 215 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           279 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           31 
#